© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6086 |
| Gene name | |
| Location | Contig_52:40504..41953 |
| Strand | - |
| Gene length (bp) | 1449 |
| Transcript length (bp) | 1449 |
| Coding sequence length (bp) | 1449 |
| Protein length (aa) | 483 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13641 | Glyco_tranf_2_3 | Glycosyltransferase like family 2 | 1.0E-26 | 74 | 310 |
| PF13506 | Glyco_transf_21 | Glycosyl transferase family 21 | 2.8E-07 | 139 | 310 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P17862|NODC_RHILO | N-acetylglucosaminyltransferase OS=Rhizobium loti (strain MAFF303099) GN=nodC PE=3 SV=2 | 75 | 452 | 1.0E-09 |
| sp|P50357|NODC_RHISN | N-acetylglucosaminyltransferase OS=Rhizobium sp. (strain NGR234) GN=nodC PE=3 SV=2 | 65 | 314 | 1.0E-07 |
| sp|O97711|HYAS2_BOVIN | Hyaluronan synthase 2 OS=Bos taurus GN=HAS2 PE=2 SV=1 | 127 | 433 | 4.0E-07 |
| sp|P70312|HYAS2_MOUSE | Hyaluronan synthase 2 OS=Mus musculus GN=Has2 PE=1 SV=4 | 127 | 433 | 6.0E-07 |
| sp|Q92819|HYAS2_HUMAN | Hyaluronan synthase 2 OS=Homo sapiens GN=HAS2 PE=2 SV=1 | 127 | 433 | 6.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P17862|NODC_RHILO | N-acetylglucosaminyltransferase OS=Rhizobium loti (strain MAFF303099) GN=nodC PE=3 SV=2 | 75 | 452 | 1.0E-09 |
| sp|P50357|NODC_RHISN | N-acetylglucosaminyltransferase OS=Rhizobium sp. (strain NGR234) GN=nodC PE=3 SV=2 | 65 | 314 | 1.0E-07 |
| sp|O97711|HYAS2_BOVIN | Hyaluronan synthase 2 OS=Bos taurus GN=HAS2 PE=2 SV=1 | 127 | 433 | 4.0E-07 |
| sp|P70312|HYAS2_MOUSE | Hyaluronan synthase 2 OS=Mus musculus GN=Has2 PE=1 SV=4 | 127 | 433 | 6.0E-07 |
| sp|Q92819|HYAS2_HUMAN | Hyaluronan synthase 2 OS=Homo sapiens GN=HAS2 PE=2 SV=1 | 127 | 433 | 6.0E-07 |
| sp|O35776|HYAS2_RAT | Hyaluronan synthase 2 OS=Rattus norvegicus GN=Has2 PE=2 SV=1 | 127 | 433 | 6.0E-07 |
| sp|O57427|HYAS2_XENLA | Hyaluronan synthase 2 OS=Xenopus laevis GN=has2 PE=2 SV=2 | 127 | 431 | 2.0E-06 |
| sp|O57424|HYAS2_CHICK | Hyaluronan synthase 2 OS=Gallus gallus GN=HAS2 PE=2 SV=2 | 177 | 433 | 2.0E-06 |
| sp|G5AY81|HYAS2_HETGA | Hyaluronan synthase 2 OS=Heterocephalus glaber GN=Has2 PE=3 SV=1 | 127 | 433 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 336 | 358 | 22 |
| 2 | 371 | 393 | 22 |
| 3 | 400 | 422 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6086 MDHLSPTALLGRVAADVVSQLSPLPGILESTRFWAILFCVLWVHRYTRLLVHCVSHWTYKSKPLPEKPSFTADDV TVIIPTIHHDFEQLRDSLGSIAECQPAEVVLVTTHDKLSGLRALTESLATQTKMRVLGTAIANKRLQVCEALPGV KTAITIMADDDVTWPPKLMSWILAPFEDEAMGGVGTCQRVRRERSGSWQTRMWNWLGAAYIERRNFEVSATHNID GGTSCMSGRTGAYRTAILTEHAFVDGFKNEKWRHWILNADDDNFVTRWLVNHGWKTWVQYSPECEVETTLENGAK FLFQCTRWARSNWRSNWSSLVRERTVWRRQPWCTYALHLATFTSLAFVIDPLLLWACWRALAHCHASLRCAALIA QFAFMFLFTKTVKLWALIWKHPRDMVYLPVSVLFGYFHGLIKLYALATLNMTSWGSRADGDANDHERLTRKPAPA RVLHTPPGGASLVQYNKLPACAKNSCLARQKS* |
| Coding | >OphauB2|6086 ATGGACCATCTATCGCCGACAGCGCTGCTGGGACGGGTGGCGGCCGACGTGGTGTCGCAGCTGTCGCCGCTGCCG GGCATCTTGGAGTCGACGCGCTTCTGGGCCATTCTCTTTTGCGTCTTGTGGGTGCACCGCTACACGCGGCTGCTG GTGCACTGCGTCAGCCACTGGACATACAAGTCCAAACCTCTGCCGGAAAAGCCCAGCTTCACGGCCGACGACGTG ACCGTCATCATCCCGACGATCCACCACGACTTTGAGCAGCTGCGCGACTCGCTGGGCAGCATCGCGGAGTGCCAG CCAGCCGAGGTGGTGCTGGTGACGACGCACGACAAGCTCTCGGGGCTGCGGGCGCTGACCGAGTCGCTGGCAACG CAGACCAAGATGAGGGTGCTGGGCACGGCCATTGCCAACAAGCGACTGCAGGTGTGCGAGGCGCTACCAGGCGTC AAAACAGCAATCACCATCATGGCCGACGACGACGTGACGTGGCCGCCCAAGCTCATGAGCTGGATCCTGGCGCCC TTTGAAGACGAGGCCATGGGCGGCGTGGGCACGTGCCAGCGCGTGCGGCGCGAGCGCAGCGGCAGCTGGCAGACG CGCATGTGGAACTGGCTGGGCGCCGCCTACATTGAGCGGCGCAACTTTGAAGTGTCTGCAACGCACAACATTGAC GGCGGCACCTCGTGCATGTCGGGCCGCACAGGCGCCTACCGCACCGCCATCCTAACGGAGCACGCCTTTGTCGAC GGCTTCAAAAACGAAAAGTGGCGCCACTGGATCCTCAATGCCGACGACGACAACTTTGTCACGCGCTGGCTCGTC AACCACGGCTGGAAGACTTGGGTCCAGTACAGCCCCGAGTGCGAGGTGGAGACGACGCTGGAGAATGGCGCCAAG TTTCTCTTCCAGTGCACCCGCTGGGCCCGCAGCAACTGGCGCAGCAACTGGTCCAGCCTGGTCCGCGAGCGCACC GTCTGGCGCCGCCAGCCCTGGTGTACCTATGCCCTCCACCTGGCCACCTTTACCTCGCTGGCCTTTGTCATTGAC CCGCTGCTGCTGTGGGCCTGCTGGCGCGCCCTTGCCCACTGCCATGCATCCCTCCGCTGCGCCGCCCTCATTGCC CAGTTTGCCTTTATGTTTCTCTTTACCAAGACGGTCAAGCTCTGGGCCCTCATCTGGAAGCATCCCCGCGACATG GTCTATCTGCCCGTCTCCGTCCTCTTTGGCTACTTTCACGGCCTCATCAAGCTCTACGCCCTCGCCACCCTCAAC ATGACGTCGTGGGGAAGCCGTGCCGATGGCGATGCCAATGACCACGAGCGTCTGACGCGCAAGCCTGCTCCAGCC CGCGTCCTGCACACTCCCCCGGGCGGCGCCTCGCTCGTCCAGTACAACAAGCTGCCCGCTTGTGCCAAGAATAGC TGTCTGGCTCGTCAAAAGAGCTAG |
| Transcript | >OphauB2|6086 ATGGACCATCTATCGCCGACAGCGCTGCTGGGACGGGTGGCGGCCGACGTGGTGTCGCAGCTGTCGCCGCTGCCG GGCATCTTGGAGTCGACGCGCTTCTGGGCCATTCTCTTTTGCGTCTTGTGGGTGCACCGCTACACGCGGCTGCTG GTGCACTGCGTCAGCCACTGGACATACAAGTCCAAACCTCTGCCGGAAAAGCCCAGCTTCACGGCCGACGACGTG ACCGTCATCATCCCGACGATCCACCACGACTTTGAGCAGCTGCGCGACTCGCTGGGCAGCATCGCGGAGTGCCAG CCAGCCGAGGTGGTGCTGGTGACGACGCACGACAAGCTCTCGGGGCTGCGGGCGCTGACCGAGTCGCTGGCAACG CAGACCAAGATGAGGGTGCTGGGCACGGCCATTGCCAACAAGCGACTGCAGGTGTGCGAGGCGCTACCAGGCGTC AAAACAGCAATCACCATCATGGCCGACGACGACGTGACGTGGCCGCCCAAGCTCATGAGCTGGATCCTGGCGCCC TTTGAAGACGAGGCCATGGGCGGCGTGGGCACGTGCCAGCGCGTGCGGCGCGAGCGCAGCGGCAGCTGGCAGACG CGCATGTGGAACTGGCTGGGCGCCGCCTACATTGAGCGGCGCAACTTTGAAGTGTCTGCAACGCACAACATTGAC GGCGGCACCTCGTGCATGTCGGGCCGCACAGGCGCCTACCGCACCGCCATCCTAACGGAGCACGCCTTTGTCGAC GGCTTCAAAAACGAAAAGTGGCGCCACTGGATCCTCAATGCCGACGACGACAACTTTGTCACGCGCTGGCTCGTC AACCACGGCTGGAAGACTTGGGTCCAGTACAGCCCCGAGTGCGAGGTGGAGACGACGCTGGAGAATGGCGCCAAG TTTCTCTTCCAGTGCACCCGCTGGGCCCGCAGCAACTGGCGCAGCAACTGGTCCAGCCTGGTCCGCGAGCGCACC GTCTGGCGCCGCCAGCCCTGGTGTACCTATGCCCTCCACCTGGCCACCTTTACCTCGCTGGCCTTTGTCATTGAC CCGCTGCTGCTGTGGGCCTGCTGGCGCGCCCTTGCCCACTGCCATGCATCCCTCCGCTGCGCCGCCCTCATTGCC CAGTTTGCCTTTATGTTTCTCTTTACCAAGACGGTCAAGCTCTGGGCCCTCATCTGGAAGCATCCCCGCGACATG GTCTATCTGCCCGTCTCCGTCCTCTTTGGCTACTTTCACGGCCTCATCAAGCTCTACGCCCTCGCCACCCTCAAC ATGACGTCGTGGGGAAGCCGTGCCGATGGCGATGCCAATGACCACGAGCGTCTGACGCGCAAGCCTGCTCCAGCC CGCGTCCTGCACACTCCCCCGGGCGGCGCCTCGCTCGTCCAGTACAACAAGCTGCCCGCTTGTGCCAAGAATAGC TGTCTGGCTCGTCAAAAGAGCTAG |
| Gene | >OphauB2|6086 ATGGACCATCTATCGCCGACAGCGCTGCTGGGACGGGTGGCGGCCGACGTGGTGTCGCAGCTGTCGCCGCTGCCG GGCATCTTGGAGTCGACGCGCTTCTGGGCCATTCTCTTTTGCGTCTTGTGGGTGCACCGCTACACGCGGCTGCTG GTGCACTGCGTCAGCCACTGGACATACAAGTCCAAACCTCTGCCGGAAAAGCCCAGCTTCACGGCCGACGACGTG ACCGTCATCATCCCGACGATCCACCACGACTTTGAGCAGCTGCGCGACTCGCTGGGCAGCATCGCGGAGTGCCAG CCAGCCGAGGTGGTGCTGGTGACGACGCACGACAAGCTCTCGGGGCTGCGGGCGCTGACCGAGTCGCTGGCAACG CAGACCAAGATGAGGGTGCTGGGCACGGCCATTGCCAACAAGCGACTGCAGGTGTGCGAGGCGCTACCAGGCGTC AAAACAGCAATCACCATCATGGCCGACGACGACGTGACGTGGCCGCCCAAGCTCATGAGCTGGATCCTGGCGCCC TTTGAAGACGAGGCCATGGGCGGCGTGGGCACGTGCCAGCGCGTGCGGCGCGAGCGCAGCGGCAGCTGGCAGACG CGCATGTGGAACTGGCTGGGCGCCGCCTACATTGAGCGGCGCAACTTTGAAGTGTCTGCAACGCACAACATTGAC GGCGGCACCTCGTGCATGTCGGGCCGCACAGGCGCCTACCGCACCGCCATCCTAACGGAGCACGCCTTTGTCGAC GGCTTCAAAAACGAAAAGTGGCGCCACTGGATCCTCAATGCCGACGACGACAACTTTGTCACGCGCTGGCTCGTC AACCACGGCTGGAAGACTTGGGTCCAGTACAGCCCCGAGTGCGAGGTGGAGACGACGCTGGAGAATGGCGCCAAG TTTCTCTTCCAGTGCACCCGCTGGGCCCGCAGCAACTGGCGCAGCAACTGGTCCAGCCTGGTCCGCGAGCGCACC GTCTGGCGCCGCCAGCCCTGGTGTACCTATGCCCTCCACCTGGCCACCTTTACCTCGCTGGCCTTTGTCATTGAC CCGCTGCTGCTGTGGGCCTGCTGGCGCGCCCTTGCCCACTGCCATGCATCCCTCCGCTGCGCCGCCCTCATTGCC CAGTTTGCCTTTATGTTTCTCTTTACCAAGACGGTCAAGCTCTGGGCCCTCATCTGGAAGCATCCCCGCGACATG GTCTATCTGCCCGTCTCCGTCCTCTTTGGCTACTTTCACGGCCTCATCAAGCTCTACGCCCTCGCCACCCTCAAC ATGACGTCGTGGGGAAGCCGTGCCGATGGCGATGCCAATGACCACGAGCGTCTGACGCGCAAGCCTGCTCCAGCC CGCGTCCTGCACACTCCCCCGGGCGGCGCCTCGCTCGTCCAGTACAACAAGCTGCCCGCTTGTGCCAAGAATAGC TGTCTGGCTCGTCAAAAGAGCTAG |