© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6081 |
| Gene name | |
| Location | Contig_52:18115..20057 |
| Strand | - |
| Gene length (bp) | 1942 |
| Transcript length (bp) | 1713 |
| Coding sequence length (bp) | 1713 |
| Protein length (aa) | 571 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 2.6E-13 | 9 | 113 |
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 1.8E-19 | 414 | 555 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 409 | 560 | 3.0E-50 |
| sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 397 | 560 | 1.0E-46 |
| sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 417 | 560 | 1.0E-38 |
| sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 386 | 558 | 5.0E-36 |
| sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 405 | 567 | 2.0E-34 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 409 | 560 | 3.0E-50 |
| sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 397 | 560 | 1.0E-46 |
| sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 417 | 560 | 1.0E-38 |
| sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 386 | 558 | 5.0E-36 |
| sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 405 | 567 | 2.0E-34 |
| sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 394 | 558 | 6.0E-34 |
| sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 414 | 567 | 1.0E-33 |
| sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 416 | 561 | 3.0E-33 |
| sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 409 | 558 | 9.0E-33 |
| sp|Q945S5|CAX4_ARATH | Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 | 403 | 566 | 1.0E-31 |
| sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 394 | 558 | 3.0E-31 |
| sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 371 | 553 | 7.0E-30 |
| sp|Q39253|CAX1_ARATH | Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 | 398 | 557 | 1.0E-28 |
| sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 422 | 559 | 3.0E-28 |
| sp|Q5TKG3|CAX1B_ORYSJ | Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 | 431 | 557 | 2.0E-25 |
| sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 416 | 558 | 8.0E-23 |
| sp|Q5KTQ9|CAX1C_ORYSJ | Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 | 413 | 557 | 6.0E-22 |
| sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 9 | 121 | 7.0E-18 |
| sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 9 | 121 | 8.0E-17 |
| sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 10 | 157 | 8.0E-16 |
| sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 9 | 126 | 9.0E-16 |
| sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 4 | 119 | 1.0E-15 |
| sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 10 | 120 | 2.0E-15 |
| sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 10 | 126 | 6.0E-15 |
| sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 9 | 121 | 2.0E-14 |
| sp|P42839|VNX1_YEAST | Low affinity vacuolar monovalent cation/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VNX1 PE=1 SV=1 | 382 | 559 | 3.0E-14 |
| sp|Q9P7B3|YI14_SCHPO | Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 | 380 | 551 | 2.0E-13 |
| sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 10 | 124 | 2.0E-12 |
| sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 10 | 118 | 2.0E-12 |
| sp|Q5TKG3|CAX1B_ORYSJ | Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 | 9 | 127 | 3.0E-12 |
| sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 18 | 121 | 2.0E-11 |
| sp|Q39253|CAX1_ARATH | Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 | 9 | 126 | 8.0E-11 |
| sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 9 | 121 | 3.0E-10 |
| sp|Q945S5|CAX4_ARATH | Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 | 9 | 113 | 3.0E-08 |
| sp|Q9P7B3|YI14_SCHPO | Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 | 8 | 241 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 46 | 22 |
| 2 | 59 | 78 | 19 |
| 3 | 93 | 111 | 18 |
| 4 | 412 | 434 | 22 |
| 5 | 449 | 471 | 22 |
| 6 | 478 | 500 | 22 |
| 7 | 510 | 532 | 22 |
| 8 | 539 | 561 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6081 MLVFVPGSIALVKNEIRIVQASLLGSILANLLLILGMGFFLGGLRYREQIYNSTVTQMSACLLSLSVISLVLPTA FHASFNDSSLADKQSLKISRGTSVILLLVYIIYLLFQLKSHAYMYESTPQHIVDAESIPGPAAAWLDTSSSDDSS SSSSDSDSSGHSRDTMRRRVKKVLRAGRRRKSSVTSTDTGDTNPMRSASGATANTAGSEEAASETSSPRPRIPRG SSSETNEDAIEDEREKPLKSSMRKRMHRHRRKGKKHRRDHDEAAHSTIDERPETGAVGRDNGEPRRVDFAVPEDT QVCVPVTTEDAAIPSTSRRPFPILRGMSVKNFAPTVFIQKPEQHGAAPPTPMGPVPRVRYGIRRTNSLPDRLSGH QFRPPGAMLPSQIPLMSLNSGPQGQGDDAEEDRLSRTASIILLLITTGLVAVCAEFLVGSIQEVTKTSAIGETFI GLIILPIVGNAAEHVTALTVAMKNKMDLAIGVAVGSSIQIAIFVTPLVVILGWIIGREMTLYFTLFETVSLFVSA FMVNFLVLDGRSNYLEGALLCAVYVIIGIVAFFFPSGNEASDWGE* |
| Coding | >OphauB2|6081 ATGCTTGTTTTCGTGCCTGGCAGCATCGCCCTTGTCAAGAATGAAATTCGAATCGTCCAAGCCTCTTTGCTCGGC TCCATATTGGCCAATCTGCTCCTCATCCTGGGCATGGGCTTCTTCCTGGGTGGCTTGCGGTATCGGGAACAGATT TACAACAGCACCGTGACGCAAATGAGCGCCTGTCTTCTTAGTCTAAGCGTTATTAGCCTGGTTTTACCTACTGCC TTCCATGCGTCGTTCAATGATTCAAGCCTAGCAGACAAGCAATCCCTCAAGATTAGTCGAGGGACTAGCGTGATC TTGTTGCTCGTGTACATCATTTATTTGCTCTTCCAGCTCAAGTCGCATGCGTACATGTACGAGTCGACACCGCAG CACATTGTCGATGCTGAATCAATACCCGGCCCTGCTGCCGCTTGGCTTGACACGTCGAGTTCAGATGACAGCTCC TCTTCCAGCTCAGACTCGGATAGCTCAGGCCACTCGAGGGATACAATGCGTCGCAGGGTCAAAAAGGTTCTCAGA GCCGGCCGCAGGAGAAAGTCTTCTGTTACCTCGACAGATACAGGAGATACCAACCCCATGCGATCTGCGTCGGGT GCAACCGCAAACACTGCTGGAAGCGAAGAGGCTGCTTCGGAAACTTCTTCTCCACGACCTCGCATTCCTCGTGGC TCATCGTCTGAGACGAATGAGGACGCCATTGAAGATGAGCGGGAAAAGCCGCTCAAGAGCAGCATGAGGAAGCGC ATGCATCGTCACAGGCGCAAAGGCAAGAAGCATCGACGGGACCACGACGAGGCTGCCCATTCAACCATTGATGAG CGGCCCGAAACTGGTGCCGTTGGCCGCGACAATGGCGAGCCTCGGCGAGTCGACTTTGCTGTGCCAGAAGACACC CAAGTCTGTGTGCCAGTGACTACTGAAGATGCAGCCATTCCCAGCACCTCTAGACGACCCTTTCCCATTCTTCGC GGCATGTCAGTCAAGAACTTTGCTCCCACTGTTTTTATTCAAAAGCCTGAACAGCACGGCGCTGCACCACCAACT CCCATGGGCCCGGTACCGCGAGTTCGCTATGGCATCAGACGGACCAACTCGCTGCCAGATCGGCTGAGCGGGCAC CAATTTCGCCCCCCTGGTGCCATGTTGCCCTCTCAGATTCCGCTCATGTCGCTCAATTCGGGTCCGCAGGGCCAG GGAGACGATGCAGAGGAGGACCGACTCTCGCGAACAGCTTCCATTATTCTTCTTCTCATCACCACGGGACTTGTT GCCGTTTGTGCCGAGTTTCTTGTTGGCTCCATTCAAGAGGTTACCAAGACTTCAGCCATTGGTGAGACGTTTATC GGCCTCATCATCCTGCCAATTGTTGGCAATGCAGCAGAGCACGTCACTGCGCTTACCGTGGCCATGAAGAACAAG ATGGACCTGGCAATTGGCGTTGCTGTCGGCAGCTCCATTCAGATTGCAATCTTTGTCACGCCCCTGGTGGTGATA TTGGGATGGATTATTGGCCGCGAAATGACGCTCTACTTTACCCTCTTTGAGACTGTCAGCCTCTTCGTCTCAGCC TTTATGGTCAACTTTCTTGTCCTGGACGGGCGCAGCAACTACTTGGAAGGGGCGCTGCTGTGTGCAGTCTATGTC ATTATTGGCATTGTTGCCTTTTTCTTTCCCTCGGGCAACGAGGCGAGTGATTGGGGAGAGTAG |
| Transcript | >OphauB2|6081 ATGCTTGTTTTCGTGCCTGGCAGCATCGCCCTTGTCAAGAATGAAATTCGAATCGTCCAAGCCTCTTTGCTCGGC TCCATATTGGCCAATCTGCTCCTCATCCTGGGCATGGGCTTCTTCCTGGGTGGCTTGCGGTATCGGGAACAGATT TACAACAGCACCGTGACGCAAATGAGCGCCTGTCTTCTTAGTCTAAGCGTTATTAGCCTGGTTTTACCTACTGCC TTCCATGCGTCGTTCAATGATTCAAGCCTAGCAGACAAGCAATCCCTCAAGATTAGTCGAGGGACTAGCGTGATC TTGTTGCTCGTGTACATCATTTATTTGCTCTTCCAGCTCAAGTCGCATGCGTACATGTACGAGTCGACACCGCAG CACATTGTCGATGCTGAATCAATACCCGGCCCTGCTGCCGCTTGGCTTGACACGTCGAGTTCAGATGACAGCTCC TCTTCCAGCTCAGACTCGGATAGCTCAGGCCACTCGAGGGATACAATGCGTCGCAGGGTCAAAAAGGTTCTCAGA GCCGGCCGCAGGAGAAAGTCTTCTGTTACCTCGACAGATACAGGAGATACCAACCCCATGCGATCTGCGTCGGGT GCAACCGCAAACACTGCTGGAAGCGAAGAGGCTGCTTCGGAAACTTCTTCTCCACGACCTCGCATTCCTCGTGGC TCATCGTCTGAGACGAATGAGGACGCCATTGAAGATGAGCGGGAAAAGCCGCTCAAGAGCAGCATGAGGAAGCGC ATGCATCGTCACAGGCGCAAAGGCAAGAAGCATCGACGGGACCACGACGAGGCTGCCCATTCAACCATTGATGAG CGGCCCGAAACTGGTGCCGTTGGCCGCGACAATGGCGAGCCTCGGCGAGTCGACTTTGCTGTGCCAGAAGACACC CAAGTCTGTGTGCCAGTGACTACTGAAGATGCAGCCATTCCCAGCACCTCTAGACGACCCTTTCCCATTCTTCGC GGCATGTCAGTCAAGAACTTTGCTCCCACTGTTTTTATTCAAAAGCCTGAACAGCACGGCGCTGCACCACCAACT CCCATGGGCCCGGTACCGCGAGTTCGCTATGGCATCAGACGGACCAACTCGCTGCCAGATCGGCTGAGCGGGCAC CAATTTCGCCCCCCTGGTGCCATGTTGCCCTCTCAGATTCCGCTCATGTCGCTCAATTCGGGTCCGCAGGGCCAG GGAGACGATGCAGAGGAGGACCGACTCTCGCGAACAGCTTCCATTATTCTTCTTCTCATCACCACGGGACTTGTT GCCGTTTGTGCCGAGTTTCTTGTTGGCTCCATTCAAGAGGTTACCAAGACTTCAGCCATTGGTGAGACGTTTATC GGCCTCATCATCCTGCCAATTGTTGGCAATGCAGCAGAGCACGTCACTGCGCTTACCGTGGCCATGAAGAACAAG ATGGACCTGGCAATTGGCGTTGCTGTCGGCAGCTCCATTCAGATTGCAATCTTTGTCACGCCCCTGGTGGTGATA TTGGGATGGATTATTGGCCGCGAAATGACGCTCTACTTTACCCTCTTTGAGACTGTCAGCCTCTTCGTCTCAGCC TTTATGGTCAACTTTCTTGTCCTGGACGGGCGCAGCAACTACTTGGAAGGGGCGCTGCTGTGTGCAGTCTATGTC ATTATTGGCATTGTTGCCTTTTTCTTTCCCTCGGGCAACGAGGCGAGTGATTGGGGAGAGTAG |
| Gene | >OphauB2|6081 ATGCTTGTTTTCGTGCCTGGCAGCATCGCCCTTGTCAAGGTATGTGTTGGACGCCATGCCGCAGCCACAATCAAC TAGTTACTAACGGTGGCGCAGAATGAAATTCGAATCGTCCAAGCCTCTTTGCTCGGCTCCATATTGGCCAATCTG CTCCTCATCCTGGGCATGGGCTTCTTCCTGGGTGGCTTGCGGTATCGGGAACAGGTTTGCACATTTCCATTGTCG ACATGAATGCGGCGCTTGACAGTGCTAATCCAAGTCAGATTTACAACAGCACCGTGACGCAAATGAGCGCCTGTC TTCTTAGTCTAAGCGTTATTAGCCTGGTTTTACCTGTGAGTTGCAGAGAAGCAATTTGCAAGCAGAGAAGCTGAC TCTTGTTTCTAGACTGCCTTCCATGCGTCGTTCAATGATTCAAGCCTAGCAGACAAGCAATCCCTCAAGATTAGT CGAGGGACTAGCGTGGTAAGCCACGTTTTTGAAGTGGGCTGCATAGAGGCGTTGCTGACGTGCATATTCCCCAAA GATCTTGTTGCTCGTGTACATCATTTATTTGCTCTTCCAGCTCAAGTCGCATGCGTACATGTACGAGTCGACACC GCAGCACATTGTCGATGCTGAATCAATACCCGGCCCTGCTGCCGCTTGGCTTGACACGTCGAGTTCAGATGACAG CTCCTCTTCCAGCTCAGACTCGGATAGCTCAGGCCACTCGAGGGATACAATGCGTCGCAGGGTCAAAAAGGTTCT CAGAGCCGGCCGCAGGAGAAAGTCTTCTGTTACCTCGACAGATACAGGAGATACCAACCCCATGCGATCTGCGTC GGGTGCAACCGCAAACACTGCTGGAAGCGAAGAGGCTGCTTCGGAAACTTCTTCTCCACGACCTCGCATTCCTCG TGGCTCATCGTCTGAGACGAATGAGGACGCCATTGAAGATGAGCGGGAAAAGCCGCTCAAGAGCAGCATGAGGAA GCGCATGCATCGTCACAGGCGCAAAGGCAAGAAGCATCGACGGGACCACGACGAGGCTGCCCATTCAACCATTGA TGAGCGGCCCGAAACTGGTGCCGTTGGCCGCGACAATGGCGAGCCTCGGCGAGTCGACTTTGCTGTGCCAGAAGA CACCCAAGTCTGTGTGCCAGTGACTACTGAAGATGCAGCCATTCCCAGCACCTCTAGACGACCCTTTCCCATTCT TCGCGGCATGTCAGTCAAGAACTTTGCTCCCACTGTTTTTATTCAAAAGCCTGAACAGCACGGCGCTGCACCACC AACTCCCATGGGCCCGGTACCGCGAGTTCGCTATGGCATCAGACGGACCAACTCGCTGCCAGATCGGCTGAGCGG GCACCAATTTCGCCCCCCTGGTGCCATGTTGCCCTCTCAGATTCCGCTCATGTCGCTCAATTCGGGTCCGCAGGG CCAGGGAGACGATGCAGAGGAGGACCGACTCTCGCGAACAGCTTCCATTATTCTTCTTCTCATCACCACGGGACT TGTTGCCGTTTGTGCCGAGTTTCTTGTTGGCTCCATTCAAGAGGTTACCAAGACTTCAGCCATTGGTGAGACGTT TATCGGCCTCATCATCCTGCCAATTGTTGGCAATGCAGCAGAGCACGTCACTGCGCTTACCGTGGCCATGAAGAA CAAGATGGACCTGGCAATTGGCGTTGCTGTCGGCAGCTCCATTCAGATTGCAATCTTTGTCACGCCCCTGGTGGT GATATTGGGATGGATTATTGGCCGCGAAATGACGCTCTACTTTACCCTCTTTGAGACTGTCAGCCTCTTCGTCTC AGCCTTTATGGTCAACTTTCTTGTCCTGGACGGGCGCAGCAACTACTTGGAAGGGGCGCTGCTGTGTGCAGTCTA TGTCATTATTGGCATTGTTGCCTTTTTCTTTCCCTCGGGCAACGAGGCGAGTGATTGGGGAGAGTAG |