Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|603
Gene name
LocationContig_11:230108..231601
Strand+
Gene length (bp)1493
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 7.7E-11 38 102

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38739|WSC4_YEAST Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=WSC4 PE=1 SV=1 10 115 6.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 220 242 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|603
MASVLKRAPAAGSLLLMASVCAALDPSICASFNTATSMQPKNDIYQTNGLCHDYCISQNQAYAITQGNSCWCSNY
TPAKSKQVDTGSCDKPCPAYPSEMCGGNGLFSYIALNASPAGVRPEESKPSPSSPPPPPPSPSETSTSSTPTPTP
TDDANTSSSSSSSVERLPATSIVQTVTAGGTIRTVTVIPSPTDDVANSDSARSRNRDGDGGGGIGRGGVVGIVVG
CIVGVLSVAGAIMFWWLRRKRIAEQEAAGDDPSLRGSSSGMIGGRPEMAPGSPGSTGNRSSMLNIDPRMDPFKQG
LYARAGSHESVNTLRDEHDYSRRIHPAKVLRATNPDPVAGDDA*
Coding >OphauB2|603
ATGGCTTCTGTTTTGAAGAGGGCGCCCGCCGCGGGCAGCCTCTTGTTGATGGCGTCGGTGTGCGCAGCGCTGGAC
CCGAGCATCTGCGCCAGCTTCAACACTGCCACGTCTATGCAACCAAAAAACGACATTTACCAGACAAACGGCCTG
TGTCACGACTATTGCATATCACAAAACCAAGCCTATGCAATTACGCAGGGCAACTCGTGTTGGTGCTCAAACTAT
ACTCCCGCAAAGAGCAAGCAGGTCGACACTGGCTCTTGCGATAAGCCATGCCCGGCATACCCCTCAGAAATGTGC
GGCGGCAATGGACTCTTTAGCTATATTGCCCTCAATGCCTCGCCCGCCGGCGTGCGCCCCGAAGAGAGCAAACCT
TCACCTTCTTCTCCCCCGCCGCCCCCGCCGTCTCCTTCAGAGACGAGCACAAGCTCAACACCGACACCGACACCG
ACTGACGACGCCAACACGAGCAGCAGCAGCAGCAGCTCAGTGGAGCGTCTTCCCGCCACGTCGATTGTGCAAACG
GTGACTGCTGGCGGCACCATTCGCACTGTGACGGTTATTCCCTCGCCAACGGACGACGTGGCCAACAGTGACAGC
GCGCGATCTAGAAACCGCGACGGCGATGGCGGCGGCGGAATCGGCCGAGGCGGCGTCGTGGGCATTGTTGTTGGC
TGCATCGTGGGCGTCTTGAGCGTGGCGGGAGCCATCATGTTTTGGTGGCTACGACGCAAGCGAATTGCCGAACAA
GAGGCGGCGGGCGACGATCCCAGCCTCCGAGGCAGCTCTTCGGGCATGATTGGCGGCAGACCGGAAATGGCGCCC
GGCTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGACCCCCGCATGGACCCCTTCAAGCAGGGT
CTCTATGCCCGTGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGACGAGCACGACTACTCTCGTCGCATCCAT
CCTGCAAAGGTGCTGCGAGCTACTAACCCAGATCCTGTTGCTGGCGATGACGCATAG
Transcript >OphauB2|603
ATGGCTTCTGTTTTGAAGAGGGCGCCCGCCGCGGGCAGCCTCTTGTTGATGGCGTCGGTGTGCGCAGCGCTGGAC
CCGAGCATCTGCGCCAGCTTCAACACTGCCACGTCTATGCAACCAAAAAACGACATTTACCAGACAAACGGCCTG
TGTCACGACTATTGCATATCACAAAACCAAGCCTATGCAATTACGCAGGGCAACTCGTGTTGGTGCTCAAACTAT
ACTCCCGCAAAGAGCAAGCAGGTCGACACTGGCTCTTGCGATAAGCCATGCCCGGCATACCCCTCAGAAATGTGC
GGCGGCAATGGACTCTTTAGCTATATTGCCCTCAATGCCTCGCCCGCCGGCGTGCGCCCCGAAGAGAGCAAACCT
TCACCTTCTTCTCCCCCGCCGCCCCCGCCGTCTCCTTCAGAGACGAGCACAAGCTCAACACCGACACCGACACCG
ACTGACGACGCCAACACGAGCAGCAGCAGCAGCAGCTCAGTGGAGCGTCTTCCCGCCACGTCGATTGTGCAAACG
GTGACTGCTGGCGGCACCATTCGCACTGTGACGGTTATTCCCTCGCCAACGGACGACGTGGCCAACAGTGACAGC
GCGCGATCTAGAAACCGCGACGGCGATGGCGGCGGCGGAATCGGCCGAGGCGGCGTCGTGGGCATTGTTGTTGGC
TGCATCGTGGGCGTCTTGAGCGTGGCGGGAGCCATCATGTTTTGGTGGCTACGACGCAAGCGAATTGCCGAACAA
GAGGCGGCGGGCGACGATCCCAGCCTCCGAGGCAGCTCTTCGGGCATGATTGGCGGCAGACCGGAAATGGCGCCC
GGCTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGACCCCCGCATGGACCCCTTCAAGCAGGGT
CTCTATGCCCGTGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGACGAGCACGACTACTCTCGTCGCATCCAT
CCTGCAAAGGTGCTGCGAGCTACTAACCCAGATCCTGTTGCTGGCGATGACGCATAG
Gene >OphauB2|603
ATGGCTTCTGTTTTGAAGAGGGCGCCCGCCGCGGGCAGCCTCTTGTTGATGGCGTCGGTGTGCGCAGCGCTGGAC
CCGAGCATCTGCGCCAGCTTCAACACTGCCACGTCTATGCAACCAAGTAAGTCCTGTTGGCCGAAACGCACCTCG
AGGCTTGGGCTCATTGCTGGCAGAAAACGACATTTACCAGACAAACGGCCTGTGTCACGACTATTGCATATCACA
AAACCAAGCCTATGCAATTACGCAGGGCAACTCGTGTTGGTGCTCAAACTATACTCCCGCAAAGAGCAAGCAGGT
CGACACTGGCTCTTGCGATAAGCCATGCCCGGCATACCCCTCAGAAATGTGCGGCGGCAATGGACTCTTTAGCTA
TATTGCCCTCAATGCCTCGCCCGCCGGCGTGCGCCCCGAAGAGAGCAAACCTTCACCTTCTTCTCCCCCGCCGCC
CCCGCCGTCTCCTTCAGAGGTGAGTCTAGGATTGTCTTGTTTCTTGTCTTTATTCTCGTGTCTTCAACTACAAGT
GGAGTTTGTCGCTGGCGTTTATGTTTTGGCTTTTTTTTTTTCTCTCGTATTTTCCGCTCGACGCAAACAGGACCA
GACCTCGTTTGCAGTGTGCATCCGGCCTCGTGGAGGAACAAAGGGCTTAATTGTCTGCATGATTTCAGGCCGAAA
CCGCGACCGCGACAATGTGGAAGACTCAAACTGTGCAGGACACAGTGACTCAATCTGCTTCCCCTCCCCCTCCCC
CTCCACAAACTACTTCAAGCAGTAGTTCTACTTTAGTACGGTCACATTGCCCTATTTCCAAGGAGAAAAAGAATG
GCTTGCACTGGGAAGAGAGACGGCGAGGCGTGAGGCTAACTCTGGTGGTTTAGACGAGCACAAGCTCAACACCGA
CACCGACACCGACTGACGACGCCAACACGAGCAGCAGCAGCAGCAGCTCAGTGGAGCGTCTTCCCGCCACGTCGA
TTGTGCAAACGGTGACTGCTGGCGGCACCATTCGCACTGTGACGGTTATTCCCTCGCCAACGGACGACGTGGCCA
ACAGTGACAGCGCGCGATCTAGAAACCGCGACGGCGATGGCGGCGGCGGAATCGGCCGAGGCGGCGTCGTGGGCA
TTGTTGTTGGCTGCATCGTGGGCGTCTTGAGCGTGGCGGGAGCCATCATGTTTTGGTGGCTACGACGCAAGCGAA
TTGCCGAACAAGAGGCGGCGGGCGACGATCCCAGCCTCCGAGGCAGCTCTTCGGGCATGATTGGCGGCAGACCGG
AAATGGCGCCCGGCTCTCCAGGCTCGACGGGCAACCGCAGCAGCATGCTGAATATCGACCCCCGCATGGACCCCT
TCAAGCAGGGTCTCTATGCCCGTGCGGGCAGCCACGAAAGCGTCAATACGCTGCGCGACGAGCACGACTACTCTC
GTCGCATCCATCCTGCAAAGGTGCTGCGAGCTACTAACCCAGATCCTGTTGCTGGCGATGACGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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