Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5998
Gene name
LocationContig_50:54749..56121
Strand+
Gene length (bp)1372
Transcript length (bp)1266
Coding sequence length (bp)1266
Protein length (aa) 422

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01266 DAO FAD dependent oxidoreductase 1.1E-68 7 399

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10058|YAM3_SCHPO Putative oxidoreductase C1F5.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F5.03c PE=3 SV=1 1 417 3.0E-59
sp|P38758|TDA3_YEAST Putative oxidoreductase TDA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA3 PE=1 SV=2 138 419 2.0E-53
sp|P38758|TDA3_YEAST Putative oxidoreductase TDA3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA3 PE=1 SV=2 17 111 4.0E-18

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5998
MDQRRNIVIVGGGVIGCTTAYFLTRHPNFNPALHSIILLEAGPAVAAGASGKAGGLLARWAYPASLVPLSFNLHA
QLAAQHNGAQRWGYRHVTCGSLEASISSQKIEQLQRSRQGSKEWEKLPKQDQAARDLLQTACLPQELDWVDRESV
TSWSEMGGPGTTETAQVHPLHFTTAMSELACQAGAELRTNAKVTNLVTSKAGVERVEYVDRQANESKSIDQVTDI
VVTAGPWTGRLLPRSKVEGLRAHSVVFEAQVSPFAVFTDIELPPDFVPEHRAKMGQKRMHKGSVDPEIYARPFGE
VYACGEPDRNVPLPETADVVQCDEAQCDDIVSYVATVSPVLGAAPVKAKQACYLPRHMRFGQESGPLLGSTTVPG
LWVAAGHTCWGIQNGPGTGKLMSEYIFDGAAKSAEVDSLDPRKFKV*
Coding >OphauB2|5998
ATGGACCAACGACGCAACATCGTCATTGTTGGCGGCGGCGTCATTGGATGCACAACGGCTTACTTTCTCACCCGC
CACCCCAACTTCAATCCGGCCTTACACTCGATAATTCTGCTCGAGGCCGGCCCGGCAGTCGCAGCCGGAGCTTCA
GGCAAAGCTGGCGGCCTCCTTGCTCGATGGGCCTACCCAGCCAGCCTTGTTCCCCTCTCCTTCAACCTTCACGCC
CAACTGGCTGCTCAACACAACGGCGCCCAAAGATGGGGGTACCGACACGTTACCTGTGGCTCCCTCGAGGCATCT
ATATCCAGTCAAAAGATTGAGCAACTGCAAAGATCGCGCCAGGGGAGCAAGGAGTGGGAGAAGCTGCCGAAGCAA
GATCAGGCTGCCAGGGACCTATTGCAAACAGCATGTCTGCCGCAGGAGCTCGACTGGGTCGATCGCGAATCAGTC
ACCAGCTGGTCTGAGATGGGCGGGCCAGGGACCACGGAGACGGCCCAAGTCCATCCCTTGCACTTCACCACAGCC
ATGAGTGAGCTGGCTTGCCAAGCCGGAGCTGAATTGCGCACAAACGCCAAAGTGACCAACCTTGTCACGTCCAAG
GCTGGGGTGGAGAGGGTCGAATATGTCGACAGACAGGCCAACGAGTCGAAGAGTATTGATCAAGTGACGGACATT
GTCGTGACAGCAGGGCCGTGGACCGGGCGCCTGTTGCCGCGATCCAAGGTAGAGGGCTTGAGAGCCCACAGCGTC
GTATTCGAGGCACAAGTAAGCCCTTTTGCCGTCTTCACCGACATTGAGCTGCCGCCCGACTTTGTTCCCGAGCAC
CGTGCCAAGATGGGCCAAAAGAGAATGCACAAGGGGTCGGTAGATCCCGAAATCTATGCGCGGCCTTTTGGAGAG
GTGTATGCCTGTGGAGAGCCGGACAGAAACGTGCCTCTTCCGGAAACGGCAGACGTGGTGCAGTGTGATGAGGCT
CAGTGCGACGACATTGTCTCGTATGTCGCAACTGTGAGCCCGGTATTGGGCGCGGCGCCCGTCAAAGCCAAGCAA
GCATGCTACTTGCCGCGACACATGCGGTTTGGCCAGGAGAGCGGTCCTTTGCTGGGTAGCACCACGGTCCCGGGG
CTATGGGTTGCCGCAGGGCATACGTGCTGGGGGATTCAAAATGGACCCGGCACGGGCAAGCTCATGTCAGAGTAC
ATTTTTGATGGCGCTGCCAAGAGCGCAGAGGTGGACTCGCTTGACCCCAGAAAATTCAAGGTCTGA
Transcript >OphauB2|5998
ATGGACCAACGACGCAACATCGTCATTGTTGGCGGCGGCGTCATTGGATGCACAACGGCTTACTTTCTCACCCGC
CACCCCAACTTCAATCCGGCCTTACACTCGATAATTCTGCTCGAGGCCGGCCCGGCAGTCGCAGCCGGAGCTTCA
GGCAAAGCTGGCGGCCTCCTTGCTCGATGGGCCTACCCAGCCAGCCTTGTTCCCCTCTCCTTCAACCTTCACGCC
CAACTGGCTGCTCAACACAACGGCGCCCAAAGATGGGGGTACCGACACGTTACCTGTGGCTCCCTCGAGGCATCT
ATATCCAGTCAAAAGATTGAGCAACTGCAAAGATCGCGCCAGGGGAGCAAGGAGTGGGAGAAGCTGCCGAAGCAA
GATCAGGCTGCCAGGGACCTATTGCAAACAGCATGTCTGCCGCAGGAGCTCGACTGGGTCGATCGCGAATCAGTC
ACCAGCTGGTCTGAGATGGGCGGGCCAGGGACCACGGAGACGGCCCAAGTCCATCCCTTGCACTTCACCACAGCC
ATGAGTGAGCTGGCTTGCCAAGCCGGAGCTGAATTGCGCACAAACGCCAAAGTGACCAACCTTGTCACGTCCAAG
GCTGGGGTGGAGAGGGTCGAATATGTCGACAGACAGGCCAACGAGTCGAAGAGTATTGATCAAGTGACGGACATT
GTCGTGACAGCAGGGCCGTGGACCGGGCGCCTGTTGCCGCGATCCAAGGTAGAGGGCTTGAGAGCCCACAGCGTC
GTATTCGAGGCACAAGTAAGCCCTTTTGCCGTCTTCACCGACATTGAGCTGCCGCCCGACTTTGTTCCCGAGCAC
CGTGCCAAGATGGGCCAAAAGAGAATGCACAAGGGGTCGGTAGATCCCGAAATCTATGCGCGGCCTTTTGGAGAG
GTGTATGCCTGTGGAGAGCCGGACAGAAACGTGCCTCTTCCGGAAACGGCAGACGTGGTGCAGTGTGATGAGGCT
CAGTGCGACGACATTGTCTCGTATGTCGCAACTGTGAGCCCGGTATTGGGCGCGGCGCCCGTCAAAGCCAAGCAA
GCATGCTACTTGCCGCGACACATGCGGTTTGGCCAGGAGAGCGGTCCTTTGCTGGGTAGCACCACGGTCCCGGGG
CTATGGGTTGCCGCAGGGCATACGTGCTGGGGGATTCAAAATGGACCCGGCACGGGCAAGCTCATGTCAGAGTAC
ATTTTTGATGGCGCTGCCAAGAGCGCAGAGGTGGACTCGCTTGACCCCAGAAAATTCAAGGTCTGA
Gene >OphauB2|5998
ATGGACCAACGACGCAACATCGTCATTGTTGGTAGGCAGTCCAGGCCCCGACTCCAGGTCCCTGACAGCTGATGG
CTCCAGGCGGCGGCGTCATTGGATGCACAACGGCTTACTTTCTCACCCGCCACCCCAACTTCAATCCGGCCTTAC
ACTCGATAATTCTGCTCGAGGCCGGCCCGGCAGTCGCAGCCGGAGCTTCAGGCAAAGCTGGCGGCCTCCTTGCTC
GATGGGCCTACCCAGCCAGCCTTGTTCCCCTCTCCTTCAACCTTCACGCCCAACTGGCTGCTCAACACAACGGCG
CCCAAAGATGGGGGTACCGACACGTTACCTGTGGCTCCCTCGAGGCATCTATATCCAGTCAAAAGATTGAGCAAC
TGCAAAGATCGCGCCAGGGGAGCAAGGAGTGGGAGAAGCTGCCGAAGCAAGATCAGGCTGCCAGGGACCTATTGC
AAACAGCATGTCTGCCGCAGGAGCTCGACTGGGTCGATCGCGAATCAGTCACCAGCTGGTCTGAGATGGGCGGGC
CAGGGACCACGGAGACGGCCCAAGTCCATCCCTTGCACTTCACCACAGCCATGAGTGAGCTGGCTTGCCAAGCCG
GAGCTGAATTGCGCACAAACGCCAAAGTGACCAACCTTGTCACGTCCAAGGCTGGGGTGGAGAGGGTCGAATATG
TCGACAGACAGGCCAACGAGTCGAAGAGTATTGATCAAGTGACGGACATTGTCGTGACAGCAGGGCCGTGGACCG
GGCGCCTGTTGCCGCGATCCAAGGTAGAGGGCTTGAGAGCCCACAGCGTCGTATTCGAGGCACAAGTAAGCCCTT
TTGCCGTCTTCACCGACATTGAGCTGCCGCCCGACTTTGTTCCCGAGCACCGTGCCAAGATGGGCCAAAAGAGAA
TGCACAAGGGGTCGGTAGATCCCGAAATCTATGCGCGGCCTTTTGGAGAGGTGTATGCCTGTGGTAGGTCGCTCC
TGGGTGCCGTGCAATGGCCCAGCGCTAATGCTTGATTTTTGCAGGAGAGCCGGACAGAAACGTGCCTCTTCCGGA
AACGGCAGACGTGGTGCAGTGTGATGAGGCTCAGTGCGACGACATTGTCTCGTATGTCGCAACTGTGAGCCCGGT
ATTGGGCGCGGCGCCCGTCAAAGCCAAGCAAGCATGCTACTTGCCGCGACACATGCGGTTTGGCCAGGAGAGCGG
TCCTTTGCTGGGTAGCACCACGGTCCCGGGGCTATGGGTTGCCGCAGGGCATACGTGCTGGGGGATTCAAAATGG
ACCCGGCACGGGCAAGCTCATGTCAGAGTACATTTTTGATGGCGCTGCCAAGAGCGCAGAGGTGGACTCGCTTGA
CCCCAGAAAATTCAAGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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