© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5988 |
| Gene name | |
| Location | Contig_50:20279..21904 |
| Strand | - |
| Gene length (bp) | 1625 |
| Transcript length (bp) | 1506 |
| Coding sequence length (bp) | 1506 |
| Protein length (aa) | 502 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.2E-25 | 43 | 343 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13714|YDZ7_SCHPO | Uncharacterized membrane protein C14C4.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC14C4.07 PE=1 SV=1 | 52 | 455 | 3.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 35 | 57 | 22 |
| 2 | 94 | 116 | 22 |
| 3 | 129 | 148 | 19 |
| 4 | 163 | 185 | 22 |
| 5 | 198 | 220 | 22 |
| 6 | 224 | 246 | 22 |
| 7 | 284 | 306 | 22 |
| 8 | 326 | 348 | 22 |
| 9 | 369 | 388 | 19 |
| 10 | 393 | 415 | 22 |
| 11 | 428 | 450 | 22 |
| 12 | 460 | 482 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5988 MSPSQDAPLLQWPDDQHSRRQMHIKAKPWQVQTPSAIVRLIALITFCFTLCGMLMLTPALRLVEDAFCHAYYHEE TLDPIQETRCKIDEVQSRMAFILGWCGLFTSVMTLLVTFPYGALADRIGRKPAAICAYCSTALSYMYTPFMLANF QTPVRQNPYLLLPGSLFILLGGGIEVFVATINAMAADVSTESQKASSFLYLFLGSNVGTLVGPLLAGLLMKKHGP WTPIYLVIFLMPLVLCLFLFLPETLHATHGRVATARKKRSLVAQVKTHAIHGLRDLVRSVLMINDISIPLVLLTF FLRSAGHAAFSSMMAQYVSKHFGWKLAETSLLLSPFGALHLVVLITLPHVSQMLTSPRFGFSSFEKDLLLTQLST LIVFVGTMTAGLAQDIGLFLIGLFIAALGNADGPLARATVTHFVDAGFTSRLYGLIAISQVLGTFIAGPVLAWLF DQGLQRKGFWIGLPWYYVALLNAMSLAALLLVGPPKKRVQDQADYHDDESD* |
| Coding | >OphauB2|5988 ATGTCGCCCTCGCAAGACGCTCCTCTGCTGCAATGGCCAGACGACCAGCACTCGCGCCGCCAGATGCACATCAAG GCCAAGCCCTGGCAGGTGCAAACTCCCAGCGCCATTGTGCGCTTGATTGCCTTGATCACGTTTTGCTTCACCCTG TGCGGCATGCTCATGTTGACGCCTGCCCTGCGCCTGGTTGAGGATGCCTTTTGCCATGCCTACTACCACGAGGAG ACGCTCGACCCCATTCAGGAGACGCGCTGCAAAATCGACGAGGTGCAGTCGCGCATGGCTTTCATTCTGGGCTGG TGCGGCCTCTTCACCTCGGTCATGACTTTGCTCGTTACTTTTCCCTATGGCGCCCTGGCTGATCGCATCGGCCGC AAGCCAGCCGCTATCTGTGCCTACTGCAGCACCGCCCTTTCCTACATGTACACGCCCTTTATGCTGGCCAACTTT CAGACCCCGGTCCGCCAGAATCCCTATCTGCTGCTTCCTGGCTCGCTCTTTATCCTGCTGGGCGGAGGCATAGAA GTCTTTGTTGCCACCATTAATGCCATGGCCGCCGATGTCAGCACCGAGAGCCAAAAAGCTTCAAGCTTTCTCTAC CTTTTCCTCGGCTCAAATGTTGGGACCCTTGTCGGGCCCTTGCTAGCTGGCCTGCTCATGAAGAAGCACGGCCCC TGGACCCCCATTTATCTCGTCATTTTCCTCATGCCATTGGTGCTCTGCCTCTTCTTGTTTCTCCCCGAGACACTC CATGCTACCCATGGCCGAGTCGCAACAGCCAGGAAGAAGCGCTCCTTGGTAGCCCAAGTCAAAACTCATGCCATT CATGGCTTACGCGACCTTGTACGCTCAGTACTCATGATTAACGACATTAGCATTCCCCTAGTGCTCCTCACCTTC TTCCTCCGCAGCGCCGGCCATGCTGCCTTTTCTTCAATGATGGCACAATATGTCAGCAAGCACTTTGGCTGGAAG CTCGCTGAAACAAGTCTCTTGCTCTCTCCATTCGGCGCGCTTCATCTCGTTGTGCTCATCACCCTGCCGCATGTC TCCCAGATGCTGACTTCACCGCGCTTTGGCTTCTCGTCCTTTGAAAAGGACCTTTTGCTCACCCAGCTCTCAACT CTTATTGTTTTTGTTGGTACCATGACGGCCGGCCTTGCCCAAGACATTGGCCTCTTTCTCATTGGTCTCTTCATC GCCGCCCTTGGAAACGCCGATGGCCCTCTTGCTCGCGCAACAGTTACTCACTTTGTTGACGCTGGCTTCACCTCT AGGCTCTACGGCCTCATTGCCATTTCACAGGTGCTTGGGACTTTTATTGCCGGCCCCGTGCTGGCCTGGCTCTTT GACCAGGGCTTGCAAAGAAAGGGCTTTTGGATTGGGCTGCCCTGGTACTATGTTGCTCTCCTGAATGCCATGTCC CTCGCCGCTCTTCTCCTCGTTGGCCCACCCAAGAAGAGGGTGCAAGATCAAGCAGACTATCATGATGATGAATCA GATTAA |
| Transcript | >OphauB2|5988 ATGTCGCCCTCGCAAGACGCTCCTCTGCTGCAATGGCCAGACGACCAGCACTCGCGCCGCCAGATGCACATCAAG GCCAAGCCCTGGCAGGTGCAAACTCCCAGCGCCATTGTGCGCTTGATTGCCTTGATCACGTTTTGCTTCACCCTG TGCGGCATGCTCATGTTGACGCCTGCCCTGCGCCTGGTTGAGGATGCCTTTTGCCATGCCTACTACCACGAGGAG ACGCTCGACCCCATTCAGGAGACGCGCTGCAAAATCGACGAGGTGCAGTCGCGCATGGCTTTCATTCTGGGCTGG TGCGGCCTCTTCACCTCGGTCATGACTTTGCTCGTTACTTTTCCCTATGGCGCCCTGGCTGATCGCATCGGCCGC AAGCCAGCCGCTATCTGTGCCTACTGCAGCACCGCCCTTTCCTACATGTACACGCCCTTTATGCTGGCCAACTTT CAGACCCCGGTCCGCCAGAATCCCTATCTGCTGCTTCCTGGCTCGCTCTTTATCCTGCTGGGCGGAGGCATAGAA GTCTTTGTTGCCACCATTAATGCCATGGCCGCCGATGTCAGCACCGAGAGCCAAAAAGCTTCAAGCTTTCTCTAC CTTTTCCTCGGCTCAAATGTTGGGACCCTTGTCGGGCCCTTGCTAGCTGGCCTGCTCATGAAGAAGCACGGCCCC TGGACCCCCATTTATCTCGTCATTTTCCTCATGCCATTGGTGCTCTGCCTCTTCTTGTTTCTCCCCGAGACACTC CATGCTACCCATGGCCGAGTCGCAACAGCCAGGAAGAAGCGCTCCTTGGTAGCCCAAGTCAAAACTCATGCCATT CATGGCTTACGCGACCTTGTACGCTCAGTACTCATGATTAACGACATTAGCATTCCCCTAGTGCTCCTCACCTTC TTCCTCCGCAGCGCCGGCCATGCTGCCTTTTCTTCAATGATGGCACAATATGTCAGCAAGCACTTTGGCTGGAAG CTCGCTGAAACAAGTCTCTTGCTCTCTCCATTCGGCGCGCTTCATCTCGTTGTGCTCATCACCCTGCCGCATGTC TCCCAGATGCTGACTTCACCGCGCTTTGGCTTCTCGTCCTTTGAAAAGGACCTTTTGCTCACCCAGCTCTCAACT CTTATTGTTTTTGTTGGTACCATGACGGCCGGCCTTGCCCAAGACATTGGCCTCTTTCTCATTGGTCTCTTCATC GCCGCCCTTGGAAACGCCGATGGCCCTCTTGCTCGCGCAACAGTTACTCACTTTGTTGACGCTGGCTTCACCTCT AGGCTCTACGGCCTCATTGCCATTTCACAGGTGCTTGGGACTTTTATTGCCGGCCCCGTGCTGGCCTGGCTCTTT GACCAGGGCTTGCAAAGAAAGGGCTTTTGGATTGGGCTGCCCTGGTACTATGTTGCTCTCCTGAATGCCATGTCC CTCGCCGCTCTTCTCCTCGTTGGCCCACCCAAGAAGAGGGTGCAAGATCAAGCAGACTATCATGATGATGAATCA GATTAA |
| Gene | >OphauB2|5988 ATGTCGCCCTCGCAAGACGCTCCTCTGCTGCAATGGCCAGACGACCAGCACTCGCGCCGCCAGATGCACATCAAG GCCAAGCCCTGGCAGGTGCAAACTCCCAGCGCCATTGTGCGCTTGATTGCCTTGATCACGTTTTGCTTCACCCTG TGCGGCATGCTCATGTTGACGCCTGCCCTGCGCCTGGTTGAGGATGCCTTTTGCCATGCCTACTACCACGAGGAG ACGCTCGACCCCATTCAGGAGACGCGCTGCAAAATCGACGAGGTGCAGTCGCGCATGGCTTTCATTCTGGGCTGG TGCGGCCTCTTCACCTCGGTCATGAGTGAGCTTTTTGTGGGCGTTGCCTGCCCCCTGGCCACGGCTAACCCCTTT GCTATAGCTTTGCTCGTTACTTTTCCCTATGGCGCCCTGGCTGATCGCATCGGCCGCAAGCCAGCCGCTATCTGT GCCTACTGCAGCACCGCCCTTTCCTACATGTACACGCCCTTTATGCTGGCCAACTTTCAGACCCCGGTCCGCCAG AATCCCTATCTGCTGCTTCCTGGCTCGCTCTTTATCCTGCTGGGCGGAGGCATAGAAGTCTTTGTTGCCACCATT AATGCCATGGCCGCCGATGTCAGCACCGAGAGCCAAAAGTGAGCCTTTTTGGGGCCCTGCCCGCTTCCTTTCTGC TGACCTCATGGCCTGCCTGCTTTAGAGCTTCAAGCTTTCTCTACCTTTTCCTCGGCTCAAATGTTGGGACCCTTG TCGGGCCCTTGCTAGCTGGCCTGCTCATGAAGAAGCACGGCCCCTGGACCCCCATTTATCTCGTCATTTTCCTCA TGCCATTGGTGCTCTGCCTCTTCTTGTTTCTCCCCGAGACACTCCATGCTACCCATGGCCGAGTCGCAACAGCCA GGAAGAAGCGCTCCTTGGTAGCCCAAGTCAAAACTCATGCCATTCATGGCTTACGCGACCTTGTACGCTCAGTAC TCATGATTAACGACATTAGCATTCCCCTAGTGCTCCTCACCTTCTTCCTCCGCAGCGCCGGCCATGCTGCCTTTT CTTCAATGATGGCACAATATGTCAGCAAGCACTTTGGCTGGAAGCTCGCTGAAACAAGTCTCTTGCTCTCTCCAT TCGGCGCGCTTCATCTCGTTGTGCTCATCACCCTGCCGCATGTCTCCCAGATGCTGACTTCACCGCGCTTTGGCT TCTCGTCCTTTGAAAAGGACCTTTTGCTCACCCAGCTCTCAACTCTTATTGTTTTTGTTGGTACCATGACGGCCG GCCTTGCCCAAGACATTGGCCTCTTTCTCATTGGTCTCTTCATCGCCGCCCTTGGAAACGCCGATGGCCCTCTTG CTCGCGCAACAGTTACTCACTTTGTTGACGCTGGCTTCACCTCTAGGCTCTACGGCCTCATTGCCATTTCACAGG TGCTTGGGACTTTTATTGCCGGCCCCGTGCTGGCCTGGCTCTTTGACCAGGGCTTGCAAAGAAAGGGCTTTTGGA TTGGGCTGCCCTGGTACTATGTTGCTCTCCTGAATGCCATGTCCCTCGCCGCTCTTCTCCTCGTTGGCCCACCCA AGAAGAGGGTGCAAGATCAAGCAGACTATCATGATGATGAATCAGATTAA |