Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5985
Gene name
LocationContig_50:9178..11115
Strand-
Gene length (bp)1937
Transcript length (bp)1692
Coding sequence length (bp)1692
Protein length (aa) 564

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12253 CAF1A Chromatin assembly factor 1 subunit A 8.3E-23 299 374

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q1MTN9|RLF2_SCHPO Chromatin assembly factor 1 subunit rlf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rlf2 PE=3 SV=2 105 351 2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5985
MSPMDPNVAETESARRKQFNHDACHFLDAESPASPLKPRAVAEDSPQPKHLPSPTQSSPIASSAATASQDGSKAQ
VPATKAAIKRKRLTAEEREEPEQEEKKALLSKEREEKRRRKEEDDRIKAEKKLQKDLEQKRAHEEKAKKARSQMK
LNAFFDRSKTPKPTSEAGSESGTPIAPEDSAPIATTSNSIYGKIHPFFCRKNTRLNTSVAKLDEDTREAKTRNLD
SFIAGGDEMHLSKSSEILSVFKTTCSRGRLYHPVRHIMERAYQDASGSGGRVGSSMSDTAFEEARKRLAEVPVKI
IAFAQDVRPPYYGTVTAKPFAMGQKNMYRLARKPVERRLALNYDYDSEAEWQDEEGEDVDIDDDEEEVDEDDDME
GFLDDSEDLGPSSRQLANLMEPQSTGLCFEDQNGHCLFDGVKEYRLEMMMGEQDGEGIDPWSMQYWEGDSKTTTR
ESKDLHFVPCSGHMAPPPVPVRTKLKAEIANRSMKLVKPTLMDGVKQAILDHSTYSKMGIIDIIWRQFQHDSSRT
EVKNTIELVAEKKGAGRLSRWDLKAGHGISQGSYDSAQ*
Coding >OphauB2|5985
ATGAGCCCAATGGATCCCAACGTCGCAGAGACGGAGTCTGCACGACGAAAGCAATTCAACCATGACGCATGTCAT
TTCTTGGATGCTGAATCACCGGCAAGCCCCCTCAAACCTCGTGCAGTGGCGGAGGATTCGCCTCAGCCGAAGCAT
TTGCCCTCACCTACTCAGAGTTCCCCCATTGCATCATCGGCTGCCACGGCTTCGCAAGATGGCTCTAAAGCCCAA
GTACCCGCTACCAAAGCCGCCATTAAGCGCAAGCGATTAACTGCGGAGGAGCGCGAGGAACCCGAGCAGGAAGAG
AAAAAGGCATTGCTATCCAAGGAGCGAGAAGAGAAGCGAAGGAGAAAAGAGGAAGATGATCGAATCAAAGCAGAG
AAGAAGCTTCAAAAGGACCTTGAACAGAAGCGTGCTCATGAAGAAAAGGCGAAAAAGGCACGTTCTCAAATGAAG
CTGAATGCCTTCTTTGACCGGTCCAAAACCCCCAAACCTACGTCCGAGGCCGGCTCTGAGTCCGGGACACCAATT
GCGCCCGAGGATTCAGCACCAATAGCCACGACATCGAATTCAATCTATGGCAAAATACATCCTTTTTTCTGCCGA
AAGAACACACGCCTCAACACTTCAGTTGCTAAGCTTGATGAAGACACGCGAGAAGCCAAGACTCGTAATCTTGAT
AGCTTTATTGCCGGTGGGGACGAAATGCATCTGTCCAAGTCGTCCGAAATACTATCTGTTTTCAAAACGACATGC
AGCAGAGGGCGACTGTACCACCCTGTCAGACACATAATGGAAAGAGCGTACCAAGATGCCAGCGGTTCGGGAGGG
AGAGTTGGAAGCAGCATGAGCGATACTGCTTTTGAGGAAGCTCGCAAGAGGTTGGCTGAGGTTCCCGTCAAAATC
ATTGCATTTGCTCAGGATGTGAGACCGCCTTATTATGGGACTGTTACGGCAAAACCGTTTGCTATGGGACAGAAA
AACATGTACAGATTGGCACGGAAACCCGTCGAGCGACGCCTGGCACTCAACTACGACTATGATTCGGAAGCTGAA
TGGCAAGACGAAGAAGGGGAAGACGTGGACATTGACGATGACGAGGAGGAAGTGGATGAAGATGATGACATGGAG
GGGTTCCTGGACGATTCCGAAGACTTGGGCCCATCGAGCCGGCAGTTGGCCAATTTGATGGAGCCTCAGAGCACG
GGCCTGTGCTTCGAGGACCAGAATGGGCATTGTTTGTTTGATGGCGTCAAGGAGTACCGGCTGGAGATGATGATG
GGAGAACAAGATGGCGAGGGCATTGATCCCTGGTCGATGCAATATTGGGAAGGTGATTCCAAAACAACGACAAGA
GAATCCAAGGATCTACATTTCGTTCCGTGTTCGGGTCACATGGCACCTCCACCTGTGCCTGTGCGAACCAAGCTC
AAGGCGGAAATAGCCAACCGGTCAATGAAGCTGGTCAAGCCAACACTAATGGACGGAGTGAAGCAAGCGATACTC
GACCACAGCACGTATTCCAAAATGGGCATCATTGACATCATTTGGCGACAGTTTCAACACGACAGCTCTCGCACC
GAGGTGAAGAATACGATTGAGCTGGTGGCGGAAAAGAAGGGAGCGGGTCGATTGAGTAGATGGGACTTGAAGGCC
GGCCATGGCATCTCGCAGGGGAGTTATGATTCGGCCCAGTAA
Transcript >OphauB2|5985
ATGAGCCCAATGGATCCCAACGTCGCAGAGACGGAGTCTGCACGACGAAAGCAATTCAACCATGACGCATGTCAT
TTCTTGGATGCTGAATCACCGGCAAGCCCCCTCAAACCTCGTGCAGTGGCGGAGGATTCGCCTCAGCCGAAGCAT
TTGCCCTCACCTACTCAGAGTTCCCCCATTGCATCATCGGCTGCCACGGCTTCGCAAGATGGCTCTAAAGCCCAA
GTACCCGCTACCAAAGCCGCCATTAAGCGCAAGCGATTAACTGCGGAGGAGCGCGAGGAACCCGAGCAGGAAGAG
AAAAAGGCATTGCTATCCAAGGAGCGAGAAGAGAAGCGAAGGAGAAAAGAGGAAGATGATCGAATCAAAGCAGAG
AAGAAGCTTCAAAAGGACCTTGAACAGAAGCGTGCTCATGAAGAAAAGGCGAAAAAGGCACGTTCTCAAATGAAG
CTGAATGCCTTCTTTGACCGGTCCAAAACCCCCAAACCTACGTCCGAGGCCGGCTCTGAGTCCGGGACACCAATT
GCGCCCGAGGATTCAGCACCAATAGCCACGACATCGAATTCAATCTATGGCAAAATACATCCTTTTTTCTGCCGA
AAGAACACACGCCTCAACACTTCAGTTGCTAAGCTTGATGAAGACACGCGAGAAGCCAAGACTCGTAATCTTGAT
AGCTTTATTGCCGGTGGGGACGAAATGCATCTGTCCAAGTCGTCCGAAATACTATCTGTTTTCAAAACGACATGC
AGCAGAGGGCGACTGTACCACCCTGTCAGACACATAATGGAAAGAGCGTACCAAGATGCCAGCGGTTCGGGAGGG
AGAGTTGGAAGCAGCATGAGCGATACTGCTTTTGAGGAAGCTCGCAAGAGGTTGGCTGAGGTTCCCGTCAAAATC
ATTGCATTTGCTCAGGATGTGAGACCGCCTTATTATGGGACTGTTACGGCAAAACCGTTTGCTATGGGACAGAAA
AACATGTACAGATTGGCACGGAAACCCGTCGAGCGACGCCTGGCACTCAACTACGACTATGATTCGGAAGCTGAA
TGGCAAGACGAAGAAGGGGAAGACGTGGACATTGACGATGACGAGGAGGAAGTGGATGAAGATGATGACATGGAG
GGGTTCCTGGACGATTCCGAAGACTTGGGCCCATCGAGCCGGCAGTTGGCCAATTTGATGGAGCCTCAGAGCACG
GGCCTGTGCTTCGAGGACCAGAATGGGCATTGTTTGTTTGATGGCGTCAAGGAGTACCGGCTGGAGATGATGATG
GGAGAACAAGATGGCGAGGGCATTGATCCCTGGTCGATGCAATATTGGGAAGGTGATTCCAAAACAACGACAAGA
GAATCCAAGGATCTACATTTCGTTCCGTGTTCGGGTCACATGGCACCTCCACCTGTGCCTGTGCGAACCAAGCTC
AAGGCGGAAATAGCCAACCGGTCAATGAAGCTGGTCAAGCCAACACTAATGGACGGAGTGAAGCAAGCGATACTC
GACCACAGCACGTATTCCAAAATGGGCATCATTGACATCATTTGGCGACAGTTTCAACACGACAGCTCTCGCACC
GAGGTGAAGAATACGATTGAGCTGGTGGCGGAAAAGAAGGGAGCGGGTCGATTGAGTAGATGGGACTTGAAGGCC
GGCCATGGCATCTCGCAGGGGAGTTATGATTCGGCCCAGTAA
Gene >OphauB2|5985
ATGAGCCCAATGGATCCCAACGTCGCAGAGACGGAGTCTGCACGACGAAAGCAATTCAACCATGACGCATGTCAT
TTCTTGGATGCTGAATCACCGGCAAGCCCCCTCAAACCTCGTGCAGTGGCGGAGGATTCGCCTCAGCCGAAGCAT
TGTGAGAAAATCCCCACTCAAGCAGTCTACCTCATCCTAATGCTTATGTCGCAGTGCCCTCACCTACTCAGAGTT
CCCCCATGTTAGCATCATCACCGCGTTCTCCAACCTCGCCCAGCTCGACCAAGATCTCTTGTATTGTCGACACAT
CTCAACAAGCACAGTCGAGCAGTGCATCATCGGCTGCCACGGCTTCGCAAGATGGCTCTAAAGCCCAAGTACCCG
CTACCAAAGCCGCCATTAAGCGCAAGCGATTAACTGCGGAGGAGCGCGAGGAACGTGATAAAGAGGCAACCGAAA
AAAGGAGGAAGAGAGAGGCTGTCAAAGCCGAGCAGGAAGAGAAAAAGGCATTGCTATCCAAGGAGCGAGAAGAGA
AGCGAAGGAGAAAAGAGGAAGATGATCGAATCAAAGCAGAGAAGAAGCTTCAAAAGGACCTTGAACAGAAGCGTG
CTCATGAAGAAAAGGCGAAAAAGGCACGTTCTCAAATGAAGCTGAATGCCTTCTTTGACCGGTCCAAAACCCCCA
AACCTACGTCCGAGGCCGGCTCTGAGTCCGGGACACCAATTGCGCCCGAGGATTCAGCACCAATAGCCACGACAT
CGAATTCAATCTATGGCAAAATACATCCTTTTTTCTGCCGAAAGAACACACGCCTCAACACTTCAGTTGCTAAGC
TTGATGAAGACACGCGAGAAGCCAAGACTCGTAATCTTGATAGCTTTATTGCCGGTGGGGACGAAATGCATCTGT
CCAAGTCGTCCGAAATACTATCTGTTTTCAAAACGACATGCAGCAGAGGGCGACTGTACCACCCTGTCAGACACA
TAATGGAAAGAGCGTACCAAGATGCCAGCGGTTCGGGAGGGAGAGTTGGAAGCAGCATGAGCGATACTGCTTTTG
AGGAAGCTCGCAAGAGGTTGGCTGAGGTTCCCGTCAAAATCATTGCATTTGCTCAGGATGTGAGACCGCCTTATT
ATGGGACTGTTACGGCAAAACCGTTTGCTATGGGACAGAAAAACATGTACAGATTGGCACGGAAACCCGTCGAGC
GACGCCTGGCACTCAACTACGACTATGATTCGGAAGCTGAATGGCAAGACGAAGAAGGGGAAGACGTGGACATTG
ACGATGACGAGGAGGAAGTGGATGAAGATGATGACATGGAGGGGTTCCTGGACGATTCCGAAGACTTGGGCCCAT
CGAGCCGGCAGTTGGCCAATTTGATGGAGCCTCAGAGCACGGGCCTGTGCTTCGAGGACCAGAATGGGCATTGTT
TGTTTGATGGCGTCAAGGAGTACCGGCTGGAGATGATGATGGGTAAGAGACTTGCTGGAAGCATGAAAAGCGCCA
AAACTGACCGTGAAGTGGCAGGAGAACAAGATGGCGAGGGCATTGATCCCTGGTCGATGCAATATTGGGAAGGTG
ATTCCAAAACAACGACAAGAGAATCCAAGGATCTACATTTCGTTCCGTGTTCGGGTCACATGGCACCTCCACCTG
TGCCTGTGCGAACCAAGCTCAAGGCGGAAATAGCCAACCGGTCAATGAAGCTGGTCAAGCCAACACTAATGGACG
GAGTGAAGCAAGCGATACTCGACCACAGCACGTATTCCAAAATGGGCATCATTGACATCATTTGGCGACAGTTTC
AACACGACAGCTCTCGCACCGAGGTGAAGAATACGATTGAGCTGGTGGCGGAAAAGAAGGGAGCGGGTCGATTGA
GTAGATGGGACTTGAAGGCCGGCCATGGCATCTCGCAGGGGAGTTATGATTCGGCCCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail