Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5925
Gene name
LocationContig_5:187792..188898
Strand+
Gene length (bp)1106
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18631 Cucumopine_C Cucumopine synthase C-terminal helical bundle domain 5.2E-40 171 298

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5925
MRIQKPSLLPRHVKVKWLQLNVTITLQLNVEVNPRLINVLFESLPYRSLQNHALVSGDHLYHLVPSERLIYTVAD
YVVPDRTTEPEGTVFLSGLQHLGINYGPLTENLPAAPCGSVIPEDMEKLRNVGNCVWEACTKSKQIIEVIAWDAR
EPEPKELVPLALERTGSTAEVRQLVNAIHAETDKSWSGISLDIQRIHQGQSPSCAGSKNSYFATMVFTNGEVRPL
GYNILNNILKIAATQPQFDLQHLVTLYQVFASIPSGFLGYTGATFLEDTQDFLAIVSAFALYVNMLNAQNLHIFP
WRHTVEYPI*
Coding >OphauB2|5925
ATGCGCATTCAGAAACCTAGTTTACTACCTCGTCATGTCAAGGTCAAATGGCTACAGCTAAATGTCACTATTACT
CTTCAACTAAATGTTGAAGTCAATCCTCGACTTATCAATGTGCTTTTCGAATCTCTTCCATATCGGTCTTTGCAG
AACCACGCACTGGTGTCTGGCGACCACCTCTATCACCTCGTCCCATCCGAAAGACTCATATACACAGTGGCCGAT
TATGTCGTGCCTGACAGAACCACGGAACCAGAAGGCACCGTATTCCTCTCTGGACTCCAGCATCTAGGCATCAAC
TATGGGCCTTTGACCGAGAATCTTCCCGCTGCTCCGTGTGGTAGTGTTATTCCAGAGGACATGGAAAAGTTGCGG
AATGTCGGGAACTGCGTTTGGGAAGCTTGTACCAAAAGTAAGCAGATAATTGAGGTCATAGCGTGGGATGCCCGA
GAGCCTGAGCCCAAGGAACTCGTTCCGCTCGCCTTGGAAAGGACAGGCTCCACAGCAGAGGTAAGACAGCTCGTA
AATGCAATCCATGCAGAGACCGACAAATCATGGTCAGGAATATCATTGGACATACAAAGAATCCACCAGGGACAA
TCGCCTTCGTGCGCAGGTTCCAAAAACTCTTACTTTGCTACCATGGTCTTTACAAATGGCGAAGTTAGACCTTTG
GGGTACAACATCCTCAACAACATCCTCAAAATTGCAGCAACGCAGCCTCAGTTCGACTTGCAGCACCTGGTAACT
TTATACCAGGTCTTTGCATCTATACCCTCGGGATTCCTTGGCTACACAGGAGCAACTTTTCTCGAAGACACACAG
GACTTTCTGGCTATTGTTAGCGCATTTGCTTTATACGTAAACATGCTTAACGCTCAGAACCTGCACATCTTTCCC
TGGCGGCATACAGTCGAGTATCCAATATGA
Transcript >OphauB2|5925
ATGCGCATTCAGAAACCTAGTTTACTACCTCGTCATGTCAAGGTCAAATGGCTACAGCTAAATGTCACTATTACT
CTTCAACTAAATGTTGAAGTCAATCCTCGACTTATCAATGTGCTTTTCGAATCTCTTCCATATCGGTCTTTGCAG
AACCACGCACTGGTGTCTGGCGACCACCTCTATCACCTCGTCCCATCCGAAAGACTCATATACACAGTGGCCGAT
TATGTCGTGCCTGACAGAACCACGGAACCAGAAGGCACCGTATTCCTCTCTGGACTCCAGCATCTAGGCATCAAC
TATGGGCCTTTGACCGAGAATCTTCCCGCTGCTCCGTGTGGTAGTGTTATTCCAGAGGACATGGAAAAGTTGCGG
AATGTCGGGAACTGCGTTTGGGAAGCTTGTACCAAAAGTAAGCAGATAATTGAGGTCATAGCGTGGGATGCCCGA
GAGCCTGAGCCCAAGGAACTCGTTCCGCTCGCCTTGGAAAGGACAGGCTCCACAGCAGAGGTAAGACAGCTCGTA
AATGCAATCCATGCAGAGACCGACAAATCATGGTCAGGAATATCATTGGACATACAAAGAATCCACCAGGGACAA
TCGCCTTCGTGCGCAGGTTCCAAAAACTCTTACTTTGCTACCATGGTCTTTACAAATGGCGAAGTTAGACCTTTG
GGGTACAACATCCTCAACAACATCCTCAAAATTGCAGCAACGCAGCCTCAGTTCGACTTGCAGCACCTGGTAACT
TTATACCAGGTCTTTGCATCTATACCCTCGGGATTCCTTGGCTACACAGGAGCAACTTTTCTCGAAGACACACAG
GACTTTCTGGCTATTGTTAGCGCATTTGCTTTATACGTAAACATGCTTAACGCTCAGAACCTGCACATCTTTCCC
TGGCGGCATACAGTCGAGTATCCAATATGA
Gene >OphauB2|5925
ATGCGCATTCAGAAACCTAGTTTACTACCTCGTCATGTCAAGGTCAAATGGCTACAGCTAAATGTCACTATTACT
CTTCAACTAAATGTTGAAGTCAATCCTCGACTTATCAATGTGCTTTTCGAATCTCTTCCATATCGGTCTTTGCAG
AACCACGCACTGGTGTCTGGCGACCACCTCTATCACCTCGTCCCATCCGAAAGACTCATAGTCAGTATACAAACG
CAACCTTTCTATCAAAACAAACCTATACTAAGATAGAACAGTACACAGTGGCCGATTATGTCGTGCCTGACAGAA
CCACGGAACCAGAAGGCACCGTATTCCTCTCTGGACTCCAGCATCTAGGCATCAACTATGGGCCTTTGACCGAGA
ATCTTCCCGCTGCTCCGTGTGGTAGTGTTATTCCAGAGGACATGGAAAAGTTGCGGAATGTCGGGAACTGCGTTT
GGGAAGCTTGTACCAAAAGTAAGCAGATAATTGAGGTCATAGCGTGGGATGCCCGAGAGCCTGAGCCCAAGGAAC
TCGTTCCGCTCGCCTTGGAAAGGACAGGCTCCACAGCAGAGGTAAGACAGCTCGTAAATGCAATCCATGCAGAGG
TAGGCTTGTCAAATGAAACTATAATGAATGGCATCTACTGACCGTTGTTTCAGACCGACAAATCATGGTCAGGAA
TATCATTGGACATACAAAGAATCCACCAGGGACAATCGCCTTCGTGCGCAGGTTCCAAAAACTCTTACTTTGCTA
CCATGGTCTTTACAAATGGCGAAGTTAGACCTTTGGGGTACAACATCCTCAACAACATCCTCAAAATTGCAGCAA
CGCAGCCTCAGTTCGACTTGCAGCACCTGGTAACTTTATACCAGGTCTTTGCATCTATACCCTCGGGATTCCTTG
GCTACACAGGAGCAACTTTTCTCGAAGACACGTACTACAATATATCGGATTTGATACAGAGCCATATTCTGTCTA
ATGCTAATCATGAAGAGGCTAGACAGGACTTTCTGGCTATTGTTAGCGCATTTGCTTTATACGTAAACATGCTTA
ACGCTCAGAACCTGCACATCTTTCCCTGGCGGCATACAGTCGAGTATCCAATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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