© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5860 |
| Gene name | |
| Location | Contig_5:13842..15115 |
| Strand | - |
| Gene length (bp) | 1273 |
| Transcript length (bp) | 1209 |
| Coding sequence length (bp) | 1209 |
| Protein length (aa) | 403 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.8E-14 | 253 | 377 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32794|AFG2_YEAST | ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1 | 239 | 374 | 2.0E-08 |
| sp|C5CES8|FTSH_KOSOT | ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia (strain TBF 19.5.1) GN=ftsH PE=3 SV=1 | 245 | 374 | 4.0E-08 |
| sp|Q8EUA6|FTSH_MYCPE | ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma penetrans (strain HF-2) GN=ftsH PE=3 SV=1 | 241 | 374 | 5.0E-07 |
| sp|Q88Z31|FTSH_LACPL | ATP-dependent zinc metalloprotease FtsH OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=ftsH PE=2 SV=1 | 245 | 376 | 6.0E-07 |
| sp|C6VKW6|FTSH_LACPJ | ATP-dependent zinc metalloprotease FtsH OS=Lactobacillus plantarum (strain JDM1) GN=ftsH PE=3 SV=1 | 245 | 376 | 6.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32794|AFG2_YEAST | ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1 | 239 | 374 | 2.0E-08 |
| sp|C5CES8|FTSH_KOSOT | ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia (strain TBF 19.5.1) GN=ftsH PE=3 SV=1 | 245 | 374 | 4.0E-08 |
| sp|Q8EUA6|FTSH_MYCPE | ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma penetrans (strain HF-2) GN=ftsH PE=3 SV=1 | 241 | 374 | 5.0E-07 |
| sp|Q88Z31|FTSH_LACPL | ATP-dependent zinc metalloprotease FtsH OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=ftsH PE=2 SV=1 | 245 | 376 | 6.0E-07 |
| sp|C6VKW6|FTSH_LACPJ | ATP-dependent zinc metalloprotease FtsH OS=Lactobacillus plantarum (strain JDM1) GN=ftsH PE=3 SV=1 | 245 | 376 | 6.0E-07 |
| sp|A9BJK3|FTSH3_PETMO | ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1 | 245 | 376 | 1.0E-06 |
| sp|A9KIG5|FTSH_CLOPH | ATP-dependent zinc metalloprotease FtsH OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=ftsH PE=3 SV=1 | 241 | 374 | 2.0E-06 |
| sp|A9BHD3|FTSH2_PETMO | ATP-dependent zinc metalloprotease FtsH 2 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=ftsH2 PE=3 SV=1 | 245 | 376 | 3.0E-06 |
| sp|Q83FV7|FTSH_TROWT | ATP-dependent zinc metalloprotease FtsH OS=Tropheryma whipplei (strain Twist) GN=ftsH PE=3 SV=1 | 245 | 341 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0016887 | ATP hydrolysis activity | Yes |
| GO:0017076 | purine nucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0043168 | anion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5860 MRTSLDAKIRPLGQNTGLEKASLMGAARIYVSKDSHIALTGTLDYGRHCSVDLLDSVSSSPMAESRREALLWLLP DKNLSPNVVMMTRAFMEATGFKVGDQVRISLGPQEIEAEQVVLQDVSDAEQRDAAVDEAKYQPSWEYILSLCMKR AEQIFAGMVFEGVNMSTDRRRFRVLSVNSQTRNLAKFKIASTEIRILDQAEQEGSEATDLPLRDLVVLNAPGLAS QVKALNRFFAAYSFSYFLRGERKSCGIVIHGDHGTGKTFLLRRIAETAWGKVYWIKPSDKLSSIRDLFKQAHASE RSIILIDDIDELISKDRSNREAVIEALCDELDDLSAKAQLLNALPRVVVVATSLDYFTQVPLKLQNENRFDKSIL LPXXXXXXXXXXXXXXXXXXQKRSKSV* |
| Coding | >OphauB2|5860 ATGCGAACAAGCCTCGACGCCAAGATCCGGCCATTGGGCCAAAACACAGGCCTGGAAAAGGCCAGTCTCATGGGC GCCGCCCGCATCTACGTCAGCAAAGACTCACACATTGCTCTGACTGGCACACTCGATTATGGCCGACACTGCTCA GTCGACTTGTTAGATTCTGTCTCGTCGTCGCCCATGGCAGAGTCGAGACGCGAGGCGCTTCTGTGGCTGCTGCCA GACAAGAACCTGAGCCCCAATGTTGTCATGATGACTCGCGCCTTTATGGAAGCTACCGGCTTCAAGGTTGGAGAC CAAGTGCGCATTTCGCTTGGCCCGCAAGAGATTGAAGCAGAACAAGTTGTGCTGCAAGATGTGTCGGATGCAGAG CAGCGAGATGCTGCTGTCGACGAGGCAAAGTATCAGCCATCGTGGGAATATATACTCAGTCTCTGCATGAAGCGT GCTGAGCAAATATTTGCCGGCATGGTGTTTGAGGGAGTCAACATGAGTACCGATCGACGTAGATTTCGAGTCTTA TCAGTCAACTCACAAACCAGAAACCTAGCCAAGTTTAAGATAGCATCTACTGAAATTCGCATCCTAGACCAGGCC GAGCAAGAAGGGTCAGAAGCTACAGATTTGCCGCTACGTGACCTTGTCGTCTTGAATGCCCCTGGCCTCGCTTCG CAAGTCAAGGCGCTCAACAGATTCTTTGCTGCATATAGCTTTTCCTATTTCTTAAGGGGTGAGCGCAAGTCGTGT GGCATCGTCATTCATGGCGATCACGGCACTGGCAAGACCTTTCTTCTTCGACGCATAGCAGAGACGGCATGGGGA AAGGTTTATTGGATCAAGCCATCCGACAAGCTCTCGTCCATCCGAGACCTCTTCAAACAGGCGCACGCGTCGGAG CGCAGCATCATTCTCATTGATGACATTGACGAACTCATTTCCAAAGACCGTTCAAACCGCGAGGCCGTCATTGAA GCTCTATGCGACGAACTCGACGATTTGTCTGCAAAAGCCCAGCTTCTCAATGCCCTGCCTCGAGTAGTCGTGGTA GCTACAAGCCTCGATTACTTTACCCAAGTCCCCCTCAAGCTGCAAAACGAAAATCGATTCGATAAAAGTATTCTT CTTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAGAGAAGCAAG AGTGTCTAG |
| Transcript | >OphauB2|5860 ATGCGAACAAGCCTCGACGCCAAGATCCGGCCATTGGGCCAAAACACAGGCCTGGAAAAGGCCAGTCTCATGGGC GCCGCCCGCATCTACGTCAGCAAAGACTCACACATTGCTCTGACTGGCACACTCGATTATGGCCGACACTGCTCA GTCGACTTGTTAGATTCTGTCTCGTCGTCGCCCATGGCAGAGTCGAGACGCGAGGCGCTTCTGTGGCTGCTGCCA GACAAGAACCTGAGCCCCAATGTTGTCATGATGACTCGCGCCTTTATGGAAGCTACCGGCTTCAAGGTTGGAGAC CAAGTGCGCATTTCGCTTGGCCCGCAAGAGATTGAAGCAGAACAAGTTGTGCTGCAAGATGTGTCGGATGCAGAG CAGCGAGATGCTGCTGTCGACGAGGCAAAGTATCAGCCATCGTGGGAATATATACTCAGTCTCTGCATGAAGCGT GCTGAGCAAATATTTGCCGGCATGGTGTTTGAGGGAGTCAACATGAGTACCGATCGACGTAGATTTCGAGTCTTA TCAGTCAACTCACAAACCAGAAACCTAGCCAAGTTTAAGATAGCATCTACTGAAATTCGCATCCTAGACCAGGCC GAGCAAGAAGGGTCAGAAGCTACAGATTTGCCGCTACGTGACCTTGTCGTCTTGAATGCCCCTGGCCTCGCTTCG CAAGTCAAGGCGCTCAACAGATTCTTTGCTGCATATAGCTTTTCCTATTTCTTAAGGGGTGAGCGCAAGTCGTGT GGCATCGTCATTCATGGCGATCACGGCACTGGCAAGACCTTTCTTCTTCGACGCATAGCAGAGACGGCATGGGGA AAGGTTTATTGGATCAAGCCATCCGACAAGCTCTCGTCCATCCGAGACCTCTTCAAACAGGCGCACGCGTCGGAG CGCAGCATCATTCTCATTGATGACATTGACGAACTCATTTCCAAAGACCGTTCAAACCGCGAGGCCGTCATTGAA GCTCTATGCGACGAACTCGACGATTTGTCTGCAAAAGCCCAGCTTCTCAATGCCCTGCCTCGAGTAGTCGTGGTA GCTACAAGCCTCGATTACTTTACCCAAGTCCCCCTCAAGCTGCAAAACGAAAATCGATTCGATAAAAGTATTCTT CTTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAGAGAAGCAAG AGTGTCTAG |
| Gene | >OphauB2|5860 ATGCGAACAAGCCTCGACGCCAAGATCCGGCCATTGGGCCAAAACACAGGCCTGGAAAAGGCCAGTCTCATGGGC GCCGCCCGCATCTACGTCAGCAAAGACTCACACATTGCTCTGACTGGCACACTCGATTATGGCCGACACTGCTCA GTCGACTTGTTAGATTCTGTCTCGTCGTCGCCCATGGCAGAGTCGAGACGCGAGGCGCTTCTGTGGCTGCTGCCA GACAAGAACCTGAGCCCCAATGTTGTCATGATGACTCGCGCCTTTATGGAAGCTACCGGCTTCAAGGTTGGAGAC CAAGTGCGCATTTCGCTTGGCCCGCAAGAGATTGAAGCAGAACAAGTTGTGCTGCAAGATGTGTCGGATGCAGAG CAGCGAGATGCTGCTGTCGACGAGGCAAAGTATCAGCCATCGTGGGAATATATACTCAGTCTCTGCATGAGTAAG TTGAGTCGATAACAATTCCATTGTGCAAGTTTTGCTTCTCACCACAACCATGAACATAGAGCGTGCTGAGCAAAT ATTTGCCGGCATGGTGTTTGAGGGAGTCAACATGAGTACCGATCGACGTAGATTTCGAGTCTTATCAGTCAACTC ACAAACCAGAAACCTAGCCAAGTTTAAGATAGCATCTACTGAAATTCGCATCCTAGACCAGGCCGAGCAAGAAGG GTCAGAAGCTACAGATTTGCCGCTACGTGACCTTGTCGTCTTGAATGCCCCTGGCCTCGCTTCGCAAGTCAAGGC GCTCAACAGATTCTTTGCTGCATATAGCTTTTCCTATTTCTTAAGGGGTGAGCGCAAGTCGTGTGGCATCGTCAT TCATGGCGATCACGGCACTGGCAAGACCTTTCTTCTTCGACGCATAGCAGAGACGGCATGGGGAAAGGTTTATTG GATCAAGCCATCCGACAAGCTCTCGTCCATCCGAGACCTCTTCAAACAGGCGCACGCGTCGGAGCGCAGCATCAT TCTCATTGATGACATTGACGAACTCATTTCCAAAGACCGTTCAAACCGCGAGGCCGTCATTGAAGCTCTATGCGA CGAACTCGACGATTTGTCTGCAAAAGCCCAGCTTCTCAATGCCCTGCCTCGAGTAGTCGTGGTAGCTACAAGCCT CGATTACTTTACCCAAGTCCCCCTCAAGCTGCAAAACGAAAATCGATTCGATAAAAGTATTCTTCTTCCTNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAGAGAAGCAAGAGTGTCTAG |