Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5829
Gene name
LocationContig_49:44218..45897
Strand+
Gene length (bp)1679
Transcript length (bp)1614
Coding sequence length (bp)1614
Protein length (aa) 538

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05132 RNA_pol_Rpc4 RNA polymerase III RPC4 1.1E-31 362 519

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0005666 RNA polymerase III complex Yes
GO:0006383 transcription by RNA polymerase III Yes
GO:0000428 DNA-directed RNA polymerase complex No
GO:0019438 aromatic compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:1902494 catalytic complex No
GO:1990234 transferase complex No
GO:1901576 organic substance biosynthetic process No
GO:0140535 intracellular protein-containing complex No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0055029 nuclear DNA-directed RNA polymerase complex No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0003674 molecular_function No
GO:0009059 macromolecule biosynthetic process No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0005575 cellular_component No
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0016070 RNA metabolic process No
GO:0030880 RNA polymerase complex No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0061695 transferase complex, transferring phosphorus-containing groups No
GO:0006351 transcription, DNA-templated No
GO:0009058 biosynthetic process No
GO:0032991 protein-containing complex No
GO:0044238 primary metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0008152 metabolic process No
GO:0044237 cellular metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0140513 nuclear protein-containing complex No
GO:1901363 heterocyclic compound binding No
GO:0044249 cellular biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5829
MNRARATSTRGGRRGAASATDSQRRAASDDAQNSQIAATEPVGSEDATPSPSTATRRATSRSLRSTSGRFRPRAV
RRDESERDSLARQEEKKAQERAAEERRARGRSRFRSKRSRGDSMGSRGGWGRGTSTATGPFGGGFAGPSGGSGGW
LGGGSGGGSGGGFRTAGPRRVKMEGKDFGPGDESRIQEARINADKLHVLTPQEELDSEDEAMMAALGNRASSVLP
MGIYRREHKETGVIVATTAELEAAERAEEEEEEEEDSLWIDGDGSRRLPEQQEEHGVWHVREKCKAPATKASGED
GMDIDEKTEAPRSQEEKRGKREKAKDEEQAIIQADLKLLASELGGMRVTDSEGKTRAPADKDGRLYLFQFPPRLP
PLGQATAAKVKKEASEDVAMADATAVDLTQDDGASSSTATAAESSSDERAAPLDGAADGFRSQLLAQGGLIGQLK
VRASGRVQLDWAGGMTLEMSPAAGMNFLTTAMIVEERDDKPSGTSGAGVAGEGIGMGKIMGRFVLAPVWSDEDEW
TVAPADLVVPDE*
Coding >OphauB2|5829
ATGAACCGCGCACGGGCAACGTCTACTCGCGGCGGTCGTAGGGGCGCGGCCTCTGCGACGGACAGCCAAAGACGT
GCAGCTTCAGACGATGCCCAGAATTCACAAATAGCTGCAACTGAGCCTGTAGGGTCCGAAGACGCCACTCCTTCA
CCGAGCACAGCTACACGCAGAGCGACATCTCGCTCCTTGCGATCAACAAGCGGACGATTCCGTCCCAGGGCGGTA
CGTCGAGATGAATCAGAACGAGACAGCCTGGCGCGCCAAGAGGAAAAGAAGGCACAGGAAAGAGCAGCAGAAGAG
CGGCGCGCCCGGGGCCGCTCCCGGTTCCGAAGCAAAAGGAGTCGCGGCGATAGCATGGGCAGTAGAGGCGGCTGG
GGTCGCGGCACAAGCACAGCTACTGGGCCGTTTGGCGGAGGATTTGCAGGCCCGTCAGGAGGATCGGGCGGCTGG
CTTGGAGGCGGCTCTGGAGGCGGCTCTGGCGGCGGCTTCAGAACTGCGGGCCCAAGAAGGGTCAAGATGGAAGGC
AAAGATTTTGGCCCCGGAGATGAGTCACGCATACAAGAAGCCAGAATAAACGCCGACAAACTTCATGTTTTGACG
CCTCAAGAGGAACTGGACAGCGAAGATGAGGCCATGATGGCAGCCTTGGGCAACCGGGCGTCGAGTGTGCTGCCA
ATGGGTATATACCGTCGAGAACACAAGGAGACGGGTGTCATTGTGGCAACGACGGCCGAACTGGAGGCTGCAGAA
CGAGCCGAGGAAGAAGAAGAAGAAGAAGAAGACAGCCTTTGGATAGACGGAGATGGGAGCCGACGACTACCGGAG
CAGCAAGAGGAGCACGGGGTATGGCATGTCAGGGAGAAATGCAAGGCTCCGGCCACCAAGGCTAGTGGTGAGGAT
GGCATGGACATTGACGAAAAGACGGAGGCGCCACGGAGCCAGGAAGAGAAGAGGGGCAAGAGGGAAAAGGCCAAG
GATGAAGAGCAAGCCATCATCCAAGCCGACCTGAAGCTGCTGGCAAGCGAACTAGGGGGAATGAGGGTGACGGAC
AGCGAGGGCAAGACGAGGGCGCCAGCAGACAAGGACGGACGGCTCTACCTCTTTCAATTCCCGCCTCGATTGCCG
CCGCTGGGCCAGGCCACAGCGGCCAAGGTCAAGAAGGAGGCGTCGGAAGACGTGGCCATGGCGGATGCCACGGCG
GTGGATCTGACACAGGACGACGGGGCCAGCAGCAGCACGGCGACGGCAGCTGAATCAAGCAGCGACGAGCGCGCG
GCACCCCTCGACGGCGCGGCCGATGGCTTCCGCAGCCAGCTTCTGGCCCAGGGCGGGCTCATTGGCCAGCTCAAG
GTGCGCGCCTCGGGCAGGGTGCAGCTGGACTGGGCGGGCGGCATGACGCTGGAAATGAGCCCCGCCGCGGGCATG
AATTTCTTGACCACGGCCATGATTGTTGAGGAGCGCGACGACAAGCCGTCTGGCACAAGCGGCGCCGGCGTCGCG
GGCGAGGGCATCGGCATGGGCAAAATCATGGGCCGTTTTGTCTTGGCGCCCGTGTGGAGCGACGAGGACGAGTGG
ACAGTGGCTCCGGCCGACCTCGTGGTGCCCGACGAGTAA
Transcript >OphauB2|5829
ATGAACCGCGCACGGGCAACGTCTACTCGCGGCGGTCGTAGGGGCGCGGCCTCTGCGACGGACAGCCAAAGACGT
GCAGCTTCAGACGATGCCCAGAATTCACAAATAGCTGCAACTGAGCCTGTAGGGTCCGAAGACGCCACTCCTTCA
CCGAGCACAGCTACACGCAGAGCGACATCTCGCTCCTTGCGATCAACAAGCGGACGATTCCGTCCCAGGGCGGTA
CGTCGAGATGAATCAGAACGAGACAGCCTGGCGCGCCAAGAGGAAAAGAAGGCACAGGAAAGAGCAGCAGAAGAG
CGGCGCGCCCGGGGCCGCTCCCGGTTCCGAAGCAAAAGGAGTCGCGGCGATAGCATGGGCAGTAGAGGCGGCTGG
GGTCGCGGCACAAGCACAGCTACTGGGCCGTTTGGCGGAGGATTTGCAGGCCCGTCAGGAGGATCGGGCGGCTGG
CTTGGAGGCGGCTCTGGAGGCGGCTCTGGCGGCGGCTTCAGAACTGCGGGCCCAAGAAGGGTCAAGATGGAAGGC
AAAGATTTTGGCCCCGGAGATGAGTCACGCATACAAGAAGCCAGAATAAACGCCGACAAACTTCATGTTTTGACG
CCTCAAGAGGAACTGGACAGCGAAGATGAGGCCATGATGGCAGCCTTGGGCAACCGGGCGTCGAGTGTGCTGCCA
ATGGGTATATACCGTCGAGAACACAAGGAGACGGGTGTCATTGTGGCAACGACGGCCGAACTGGAGGCTGCAGAA
CGAGCCGAGGAAGAAGAAGAAGAAGAAGAAGACAGCCTTTGGATAGACGGAGATGGGAGCCGACGACTACCGGAG
CAGCAAGAGGAGCACGGGGTATGGCATGTCAGGGAGAAATGCAAGGCTCCGGCCACCAAGGCTAGTGGTGAGGAT
GGCATGGACATTGACGAAAAGACGGAGGCGCCACGGAGCCAGGAAGAGAAGAGGGGCAAGAGGGAAAAGGCCAAG
GATGAAGAGCAAGCCATCATCCAAGCCGACCTGAAGCTGCTGGCAAGCGAACTAGGGGGAATGAGGGTGACGGAC
AGCGAGGGCAAGACGAGGGCGCCAGCAGACAAGGACGGACGGCTCTACCTCTTTCAATTCCCGCCTCGATTGCCG
CCGCTGGGCCAGGCCACAGCGGCCAAGGTCAAGAAGGAGGCGTCGGAAGACGTGGCCATGGCGGATGCCACGGCG
GTGGATCTGACACAGGACGACGGGGCCAGCAGCAGCACGGCGACGGCAGCTGAATCAAGCAGCGACGAGCGCGCG
GCACCCCTCGACGGCGCGGCCGATGGCTTCCGCAGCCAGCTTCTGGCCCAGGGCGGGCTCATTGGCCAGCTCAAG
GTGCGCGCCTCGGGCAGGGTGCAGCTGGACTGGGCGGGCGGCATGACGCTGGAAATGAGCCCCGCCGCGGGCATG
AATTTCTTGACCACGGCCATGATTGTTGAGGAGCGCGACGACAAGCCGTCTGGCACAAGCGGCGCCGGCGTCGCG
GGCGAGGGCATCGGCATGGGCAAAATCATGGGCCGTTTTGTCTTGGCGCCCGTGTGGAGCGACGAGGACGAGTGG
ACAGTGGCTCCGGCCGACCTCGTGGTGCCCGACGAGTAA
Gene >OphauB2|5829
ATGAACCGCGCACGGGCAACGTCTACTCGCGGCGGTCGTAGGGGCGCGGCCTCTGCGACGGACAGCCAAAGACGT
GCAGCTTCAGACGATGCCCAGAATTCACAAATAGCTGCAACTGAGCCTGTAGGGTCCGAAGACGCCACTCCTTCA
CCGAGCACAGCTACACGCAGAGCGACATCTCGCTCCTTGCGATCAACAAGCGGACGATTCCGTCCCAGGGCGGTA
CGTCGAGATGAATCAGAACGAGACAGCCTGGCGCGCCAAGAGGAAAAGAAGGCACAGGAAAGAGCAGCAGAAGAG
CGGCGCGCCCGGGGCCGCTCCCGGTTCCGAAGCAAAAGGAGTCGCGGCGATAGCATGGGCAGTAGAGGCGGCTGG
GGTCGCGGCACAAGCACAGCTACTGGGCCGTTTGGCGGAGGATTTGCAGGCCGTGGGTTGCCCCATGACGAAGAA
TTTACCATACAAGGAGTCTTGTAGCTGACTTGGCTCATGCAGCGTCAGGAGGATCGGGCGGCTGGCTTGGAGGCG
GCTCTGGAGGCGGCTCTGGCGGCGGCTTCAGAACTGCGGGCCCAAGAAGGGTCAAGATGGAAGGCAAAGATTTTG
GCCCCGGAGATGAGTCACGCATACAAGAAGCCAGAATAAACGCCGACAAACTTCATGTTTTGACGCCTCAAGAGG
AACTGGACAGCGAAGATGAGGCCATGATGGCAGCCTTGGGCAACCGGGCGTCGAGTGTGCTGCCAATGGGTATAT
ACCGTCGAGAACACAAGGAGACGGGTGTCATTGTGGCAACGACGGCCGAACTGGAGGCTGCAGAACGAGCCGAGG
AAGAAGAAGAAGAAGAAGAAGACAGCCTTTGGATAGACGGAGATGGGAGCCGACGACTACCGGAGCAGCAAGAGG
AGCACGGGGTATGGCATGTCAGGGAGAAATGCAAGGCTCCGGCCACCAAGGCTAGTGGTGAGGATGGCATGGACA
TTGACGAAAAGACGGAGGCGCCACGGAGCCAGGAAGAGAAGAGGGGCAAGAGGGAAAAGGCCAAGGATGAAGAGC
AAGCCATCATCCAAGCCGACCTGAAGCTGCTGGCAAGCGAACTAGGGGGAATGAGGGTGACGGACAGCGAGGGCA
AGACGAGGGCGCCAGCAGACAAGGACGGACGGCTCTACCTCTTTCAATTCCCGCCTCGATTGCCGCCGCTGGGCC
AGGCCACAGCGGCCAAGGTCAAGAAGGAGGCGTCGGAAGACGTGGCCATGGCGGATGCCACGGCGGTGGATCTGA
CACAGGACGACGGGGCCAGCAGCAGCACGGCGACGGCAGCTGAATCAAGCAGCGACGAGCGCGCGGCACCCCTCG
ACGGCGCGGCCGATGGCTTCCGCAGCCAGCTTCTGGCCCAGGGCGGGCTCATTGGCCAGCTCAAGGTGCGCGCCT
CGGGCAGGGTGCAGCTGGACTGGGCGGGCGGCATGACGCTGGAAATGAGCCCCGCCGCGGGCATGAATTTCTTGA
CCACGGCCATGATTGTTGAGGAGCGCGACGACAAGCCGTCTGGCACAAGCGGCGCCGGCGTCGCGGGCGAGGGCA
TCGGCATGGGCAAAATCATGGGCCGTTTTGTCTTGGCGCCCGTGTGGAGCGACGAGGACGAGTGGACAGTGGCTC
CGGCCGACCTCGTGGTGCCCGACGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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