© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5815 |
| Gene name | |
| Location | Contig_49:8802..9697 |
| Strand | + |
| Gene length (bp) | 895 |
| Transcript length (bp) | 708 |
| Coding sequence length (bp) | 708 |
| Protein length (aa) | 236 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 1.9E-20 | 108 | 218 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9D0P0|EBPL_MOUSE | Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 | 34 | 223 | 1.0E-31 |
| sp|Q9BY08|EBPL_HUMAN | Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 | 34 | 223 | 3.0E-29 |
| sp|Q60490|EBP_CAVPO | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 | 5 | 232 | 2.0E-13 |
| sp|P70245|EBP_MOUSE | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 | 3 | 232 | 3.0E-12 |
| sp|Q9FTZ2|EBP_ORYSJ | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 | 3 | 234 | 4.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9D0P0|EBPL_MOUSE | Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 | 34 | 223 | 1.0E-31 |
| sp|Q9BY08|EBPL_HUMAN | Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 | 34 | 223 | 3.0E-29 |
| sp|Q60490|EBP_CAVPO | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 | 5 | 232 | 2.0E-13 |
| sp|P70245|EBP_MOUSE | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 | 3 | 232 | 3.0E-12 |
| sp|Q9FTZ2|EBP_ORYSJ | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 | 3 | 234 | 4.0E-12 |
| sp|Q15125|EBP_HUMAN | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 | 104 | 230 | 1.0E-10 |
| sp|O48962|EBP_ARATH | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 | 93 | 211 | 5.0E-10 |
| sp|Q9JJ46|EBP_RAT | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 | 3 | 232 | 2.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 129 | 151 | 22 |
| 3 | 158 | 178 | 20 |
| 4 | 193 | 215 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5815 MSLPPDLFDTQTIVSLLGTVAIVATAWIASHRVLAASSSGATRFLFIWHLGDALCHFIIEGSYLYHCFVSSAVPV PGREYYPTPHNYLWRGDEGSRVWGPQAGGSNAFAQMWMVYARADRRWAGADVGVISLELLTVLFDGPLACYVCYL LSKQDARANIWMIVLATAELYGGFMTFCPEWLTGNTNLDGSNFMYMWVYLVFFNMLWVFIPLYVIWHSYYNITGA FAVLSAKKKL* |
| Coding | >OphauB2|5815 ATGTCTCTCCCACCAGACCTGTTTGACACGCAGACCATAGTCTCTCTACTTGGCACCGTGGCCATTGTCGCAACT GCGTGGATAGCATCGCACCGCGTCTTAGCAGCTTCGAGCTCGGGCGCCACGCGCTTCCTCTTCATCTGGCACCTG GGCGACGCGCTGTGCCATTTTATTATTGAGGGCAGCTACCTCTACCACTGCTTCGTGTCGTCGGCCGTGCCAGTG CCGGGCAGAGAGTATTATCCCACGCCGCATAATTACCTGTGGCGGGGAGATGAAGGCAGCCGGGTCTGGGGGCCG CAGGCTGGTGGAAGTAATGCTTTTGCGCAAATGTGGATGGTGTATGCACGCGCGGACAGGCGATGGGCGGGTGCC GACGTGGGGGTGATTAGTCTTGAGCTGCTGACCGTCTTGTTTGACGGGCCATTGGCGTGCTATGTGTGCTATTTG CTGTCCAAGCAAGATGCGCGAGCAAATATATGGATGATTGTGCTCGCTACAGCTGAGCTATACGGCGGCTTCATG ACATTTTGTCCTGAATGGCTCACAGGCAACACGAACCTTGACGGCAGCAACTTTATGTACATGTGGGTTTATCTC GTCTTTTTCAACATGTTGTGGGTGTTTATCCCACTCTACGTCATTTGGCATTCATACTATAACATTACAGGGGCT TTTGCTGTGCTGTCGGCCAAGAAGAAGCTCTGA |
| Transcript | >OphauB2|5815 ATGTCTCTCCCACCAGACCTGTTTGACACGCAGACCATAGTCTCTCTACTTGGCACCGTGGCCATTGTCGCAACT GCGTGGATAGCATCGCACCGCGTCTTAGCAGCTTCGAGCTCGGGCGCCACGCGCTTCCTCTTCATCTGGCACCTG GGCGACGCGCTGTGCCATTTTATTATTGAGGGCAGCTACCTCTACCACTGCTTCGTGTCGTCGGCCGTGCCAGTG CCGGGCAGAGAGTATTATCCCACGCCGCATAATTACCTGTGGCGGGGAGATGAAGGCAGCCGGGTCTGGGGGCCG CAGGCTGGTGGAAGTAATGCTTTTGCGCAAATGTGGATGGTGTATGCACGCGCGGACAGGCGATGGGCGGGTGCC GACGTGGGGGTGATTAGTCTTGAGCTGCTGACCGTCTTGTTTGACGGGCCATTGGCGTGCTATGTGTGCTATTTG CTGTCCAAGCAAGATGCGCGAGCAAATATATGGATGATTGTGCTCGCTACAGCTGAGCTATACGGCGGCTTCATG ACATTTTGTCCTGAATGGCTCACAGGCAACACGAACCTTGACGGCAGCAACTTTATGTACATGTGGGTTTATCTC GTCTTTTTCAACATGTTGTGGGTGTTTATCCCACTCTACGTCATTTGGCATTCATACTATAACATTACAGGGGCT TTTGCTGTGCTGTCGGCCAAGAAGAAGCTCTGA |
| Gene | >OphauB2|5815 ATGTCTCTCCCACCAGACCTGTTTGACACGCAGACCATAGTCTCTCTACTTGGCACCGTGGCCATTGTCGCAACT GCGTGGATAGCATCGCACCGCGTCTTAGCAGCTTCGAGCTCGGGCGCCACGCGCTTCCTCTTCATCTGGCACCTG GGCGACGCGCTGTGCCATTTTATTATTGAGGGCAGCTACCTCTACCACTGCTTCGTGTCGTCGGCCGTGCCAGTG CCGGGCAGAGAGTATTATCCCACGCCGCATAATTACCTGTGGCGGGGAGATGAAGGCAGCCGGGTCTGGGGGCCG CAGGCTGGTGGAAGTAATGCTTTTGCGCAAATGTGGATGGTGTATGCACGCGCGGACAGGCGATGGGCGGGTGCC GACGTGGTAAGTCTTGTTTCTTTTAATGAAGAATAAAAATAGTCTTGTTTCTTTATGTTTCTTTGTTTCTTCTTT CTTAAAAATGCCAGTGTTGTATCAAACTTTTGGGATAACGAGTTGACGTTTACTGGTGGCTAGGGGGTGATTAGT CTTGAGCTGCTGACCGTCTTGTTTGACGGGCCATTGGCGTGCTATGTGTGCTATTTGCTGTCCAAGCAAGATGCG CGAGCAAATATATGGATGATTGTGCTCGCTACAGCTGAGCTATACGGCGGTAAGAAGAAAAGAAGCCGACAGCTG TTAAAGGTCCTGGGAAGCTAACTGTGTAGGCTTCATGACATTTTGTCCTGAATGGCTCACAGGCAACACGAACCT TGACGGCAGCAACTTTATGTACATGTGGGTTTATCTCGTCTTTTTCAACATGTTGTGGGTGTTTATCCCACTCTA CGTCATTTGGCATTCATACTATAACATTACAGGGGCTTTTGCTGTGCTGTCGGCCAAGAAGAAGCTCTGA |