Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5807
Gene name
LocationContig_485:366..1716
Strand-
Gene length (bp)1350
Transcript length (bp)1212
Coding sequence length (bp)1212
Protein length (aa) 404

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 2.6E-10 9 64
PF00487 FA_desaturase Fatty acid desaturase 3.1E-10 221 400

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6CMK7|SLD1_KLULA Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SLD PE=3 SV=1 2 402 7.0E-109
sp|Q8NKG8|SLD1_KLULC Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis GN=SLD PE=1 SV=1 2 402 5.0E-107
sp|Q8NKG9|SLD1_LACK1 Delta 8-(E)-sphingolipid desaturase OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=SLD PE=1 SV=1 2 402 2.0E-106
sp|Q5AEK8|SLD1_CANAL Delta 8-(E)-sphingolipid desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLD1 PE=1 SV=1 1 402 7.0E-98
sp|C4QVU3|SLD1_PICPG Delta 8-(E)-sphingolipid desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr1-1_0013 PE=3 SV=1 1 402 4.0E-91
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6CMK7|SLD1_KLULA Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SLD PE=3 SV=1 2 402 7.0E-109
sp|Q8NKG8|SLD1_KLULC Delta 8-(E)-sphingolipid desaturase OS=Kluyveromyces lactis GN=SLD PE=1 SV=1 2 402 5.0E-107
sp|Q8NKG9|SLD1_LACK1 Delta 8-(E)-sphingolipid desaturase OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=SLD PE=1 SV=1 2 402 2.0E-106
sp|Q5AEK8|SLD1_CANAL Delta 8-(E)-sphingolipid desaturase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLD1 PE=1 SV=1 1 402 7.0E-98
sp|C4QVU3|SLD1_PICPG Delta 8-(E)-sphingolipid desaturase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr1-1_0013 PE=3 SV=1 1 402 4.0E-91
sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2 OS=Arabidopsis thaliana GN=SLD2 PE=1 SV=1 172 402 3.0E-36
sp|Q43469|SLD1_HELAN Delta(8)-fatty-acid desaturase OS=Helianthus annuus GN=sld1 PE=1 SV=1 172 402 1.0E-35
sp|Q9ZRP7|SLD1_ARATH Delta(8)-fatty-acid desaturase 1 OS=Arabidopsis thaliana GN=SLD1 PE=1 SV=1 170 392 3.0E-31
sp|Q9FR82|SLD1_BOROF Delta(8)-fatty-acid desaturase OS=Borago officinalis GN=sld1 PE=1 SV=1 170 401 7.0E-29
sp|Q23221|FAT3_CAEEL Delta(6)-fatty-acid desaturase fat-3 OS=Caenorhabditis elegans GN=fat-3 PE=2 SV=2 147 317 2.0E-16
sp|Q9SWQ9|SLD1_EUGGR Delta(8)-fatty-acid desaturase OS=Euglena gracilis GN=efd1 PE=1 SV=1 138 342 4.0E-12
sp|G5EG11|FAT4_CAEEL Delta(5) fatty acid desaturase fat-4 OS=Caenorhabditis elegans GN=fat-4 PE=2 SV=1 170 299 5.0E-10
sp|Q0VAX3|FS2P1_MOUSE Fatty acid desaturase 2-like protein FADS2P1 OS=Mus musculus GN=Fads2p1 PE=2 SV=1 162 299 1.0E-08
sp|A4FV48|FADS2_BOVIN Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1 162 314 1.0E-07
sp|Q9JJE7|FADS3_MOUSE Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2 162 318 1.0E-07
sp|A4KDP0|D5FAD_REBSA Acyl-lipid (8-3)-desaturase OS=Rebecca salina GN=D5Des PE=1 SV=1 166 309 5.0E-07
sp|Q9Y5Q0|FADS3_HUMAN Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1 162 318 6.0E-07
sp|Q9Z0R9|FADS2_MOUSE Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=1 SV=1 162 314 7.0E-07
sp|Q4R749|FADS2_MACFA Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1 162 314 7.0E-07
sp|Q5REA7|FADS2_PONAB Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1 162 314 1.0E-06
sp|Q9ZNV4|CYB5C_ARATH Cytochrome B5 isoform C OS=Arabidopsis thaliana GN=CYTB5-C PE=1 SV=1 9 74 1.0E-06
sp|O95864|FADS2_HUMAN Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1 162 314 1.0E-06
sp|Q9DEX7|FADS2_DANRE Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1 162 313 2.0E-06
sp|Q8S3C1|D5FAD_THRSP Acyl-lipid (8-3)-desaturase OS=Thraustochytrium sp. GN=Fad5 PE=1 SV=1 144 339 2.0E-06
sp|Q9Z122|FADS2_RAT Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1 162 314 2.0E-06
sp|Q8K1P9|FADS3_RAT Fatty acid desaturase 3 OS=Rattus norvegicus GN=Fads3 PE=2 SV=1 162 318 2.0E-06
sp|A4KDP1|D8FAD_REBSA Acyl-lipid 8-desaturase OS=Rebecca salina GN=D8Des PE=2 SV=1 168 297 9.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 203 234 31
2 249 271 22
3 331 353 22
4 373 395 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5807
MIADGRKIILFRQYVLKVDAWIPYHPGGDKAILHMVGRDATAEIEALHSNEAIQQMLRYCIGRVDGLWQNFTPPI
QGGVFRQVLQEGQDRCNNDNGGEIEMESGSSPLSSRTPSPLFDQQPAKRRLASSSSSSVSEAEFSDGMSYLDAIT
RQHISLDLDKYPAPDTSTQARILQQYRELHQRILDLGLYECDSMAYATDCCIYVALFAAMFVCLHLGQYALGGLC
LGFVWHQLVFAAHDAGHMGITHKYHVDSVIGIFIADFIGGLSMGWWKRSHNVHHIVTNAPEHDPDIEHMPLFAVS
HRLLGSLRSTYYGRVMKYDAIAKMLLKVQSWTYFPFLALGRFNLYVLSWDHLLANRGPSKGPGAWHRWLELTGQI
FFWAWFGYGILYCTIPNGWSRLFYLILR*
Coding >OphauB2|5807
ATGATTGCAGACGGGCGCAAAATTATCTTATTCCGACAATATGTCCTCAAGGTAGATGCCTGGATACCGTATCAT
CCTGGTGGTGATAAGGCTATTCTTCACATGGTTGGCAGAGATGCCACAGCTGAGATTGAAGCGTTACACTCCAAT
GAAGCAATACAGCAAATGCTGCGATATTGCATCGGTAGGGTAGATGGATTATGGCAAAACTTCACACCCCCGATC
CAGGGAGGCGTTTTCCGACAAGTACTACAAGAGGGCCAAGACAGATGTAATAACGACAATGGTGGCGAAATAGAG
ATGGAGTCGGGCTCTTCGCCGCTAAGCTCGCGTACACCATCTCCTCTATTTGACCAACAGCCAGCAAAGCGTCGT
CTTGCCTCATCTTCCTCGTCTTCAGTGAGCGAGGCAGAGTTTAGCGATGGCATGTCATACCTTGATGCCATTACA
CGCCAGCACATCAGCCTCGACCTCGATAAGTACCCAGCACCAGATACATCAACGCAGGCTCGCATATTACAACAG
TACCGCGAACTTCATCAACGCATACTAGATTTAGGTCTATATGAATGCGACTCGATGGCTTATGCGACTGACTGC
TGCATCTATGTGGCCCTGTTCGCAGCCATGTTTGTCTGCCTGCACCTTGGCCAGTATGCGCTTGGGGGCCTGTGT
CTGGGCTTTGTCTGGCATCAGCTTGTGTTTGCTGCCCATGATGCTGGTCATATGGGCATCACACACAAGTACCAC
GTGGACAGCGTCATTGGAATTTTCATTGCCGACTTTATTGGAGGACTGTCTATGGGCTGGTGGAAAAGAAGTCAC
AACGTACATCACATCGTGACGAATGCGCCCGAGCATGACCCGGATATTGAACACATGCCGCTTTTCGCAGTATCA
CATCGTCTTTTGGGTAGCCTACGCTCGACATACTACGGCCGTGTCATGAAGTATGACGCCATTGCTAAAATGCTC
CTCAAAGTGCAGTCATGGACCTATTTTCCCTTCCTGGCACTGGGACGTTTTAACCTCTATGTGTTATCGTGGGAT
CATTTGCTTGCCAATCGTGGGCCTAGCAAGGGCCCTGGTGCTTGGCACCGCTGGCTTGAACTAACCGGTCAGATT
TTTTTCTGGGCTTGGTTCGGCTATGGCATCCTCTACTGTACCATACCGAATGGCTGGTCGCGATTGTTTTATCTC
ATTTTGCGATGA
Transcript >OphauB2|5807
ATGATTGCAGACGGGCGCAAAATTATCTTATTCCGACAATATGTCCTCAAGGTAGATGCCTGGATACCGTATCAT
CCTGGTGGTGATAAGGCTATTCTTCACATGGTTGGCAGAGATGCCACAGCTGAGATTGAAGCGTTACACTCCAAT
GAAGCAATACAGCAAATGCTGCGATATTGCATCGGTAGGGTAGATGGATTATGGCAAAACTTCACACCCCCGATC
CAGGGAGGCGTTTTCCGACAAGTACTACAAGAGGGCCAAGACAGATGTAATAACGACAATGGTGGCGAAATAGAG
ATGGAGTCGGGCTCTTCGCCGCTAAGCTCGCGTACACCATCTCCTCTATTTGACCAACAGCCAGCAAAGCGTCGT
CTTGCCTCATCTTCCTCGTCTTCAGTGAGCGAGGCAGAGTTTAGCGATGGCATGTCATACCTTGATGCCATTACA
CGCCAGCACATCAGCCTCGACCTCGATAAGTACCCAGCACCAGATACATCAACGCAGGCTCGCATATTACAACAG
TACCGCGAACTTCATCAACGCATACTAGATTTAGGTCTATATGAATGCGACTCGATGGCTTATGCGACTGACTGC
TGCATCTATGTGGCCCTGTTCGCAGCCATGTTTGTCTGCCTGCACCTTGGCCAGTATGCGCTTGGGGGCCTGTGT
CTGGGCTTTGTCTGGCATCAGCTTGTGTTTGCTGCCCATGATGCTGGTCATATGGGCATCACACACAAGTACCAC
GTGGACAGCGTCATTGGAATTTTCATTGCCGACTTTATTGGAGGACTGTCTATGGGCTGGTGGAAAAGAAGTCAC
AACGTACATCACATCGTGACGAATGCGCCCGAGCATGACCCGGATATTGAACACATGCCGCTTTTCGCAGTATCA
CATCGTCTTTTGGGTAGCCTACGCTCGACATACTACGGCCGTGTCATGAAGTATGACGCCATTGCTAAAATGCTC
CTCAAAGTGCAGTCATGGACCTATTTTCCCTTCCTGGCACTGGGACGTTTTAACCTCTATGTGTTATCGTGGGAT
CATTTGCTTGCCAATCGTGGGCCTAGCAAGGGCCCTGGTGCTTGGCACCGCTGGCTTGAACTAACCGGTCAGATT
TTTTTCTGGGCTTGGTTCGGCTATGGCATCCTCTACTGTACCATACCGAATGGCTGGTCGCGATTGTTTTATCTC
ATTTTGCGATGA
Gene >OphauB2|5807
ATGATTGCAGACGGGCGCAAAATTATCTTATTCCGACAATATGTCCTCAAGGTAGATGCCTGGATACCGTATCAT
CCTGGTGGTGATAAGGCTATTCTTCACATGGTTGGCAGAGATGCCACAGCTGAGATTGAAGCGTATGCAATATTC
CTGGCCTCTAATTGTCTTTTGCTTCACTTGGAAGACTAACGACTGTCGCCCCCTCCCCCTTTCTTTAAACAAGGT
TACACTCCAATGAAGCAATACAGCAAATGCTGCGATATTGCATCGGTAGGGTAGATGGATTATGGCAAAACTTCA
CACCCCCGATCCAGGGAGGCGTTTTCCGACAAGTACTACAAGAGGGCCAAGACAGATGTAATAACGACAATGGTG
GCGAAATAGAGATGGAGTCGGGCTCTTCGCCGCTAAGCTCGCGTACACCATCTCCTCTATTTGACCAACAGCCAG
CAAAGCGTCGTCTTGCCTCATCTTCCTCGTCTTCAGTGAGCGAGGCAGAGTTTAGCGATGGCATGTCATACCTTG
ATGCCATTACACGCCAGCACATCAGCCTCGACCTCGATAAGTACCCAGCACCAGATACATCAACGCAGGCTCGCA
TATTACAACAGTACCGCGAACTTCATCAACGCATACTAGATTTAGGTCTATATGAATGCGACTCGATGGCTTATG
CGACTGACTGCTGCATCTATGTGGCCCTGTTCGCAGCCATGTTTGTCTGCCTGCACCTTGGCCAGTATGCGCTTG
GGGGCCTGTGTCTGGGCTTTGTCTGGCATCAGCTTGTGTTTGCTGCCCATGATGCTGGTCATATGGGCATCACAC
ACAAGTACCACGTGGACAGCGTCATTGGAATTTTCATTGCCGACTTTATTGGAGGACTGTCTATGGGCTGGTGGA
AAAGAAGTCACAACGTACATCACATCGTGACGAATGCGCCCGAGCATGACCCGGATATTGAACACATGCCGCTTT
TCGCAGTATCACATCGTCTTTTGGGTAGCCTACGCTCGACATACTACGGCCGTGTCATGAAGTATGACGCCATTG
CTAAAATGCTCCTCAAAGTGCAGTCATGGACCTATTTTCCCTTCCTGGCACTGGGACGTTTTAACCTCTATGTGT
TATCGTGGGATCATTTGCTTGCCAATCGTGGGCCTAGCAAGGGCCCTGGTGCTTGGCACCGCTGGCTTGAACTAA
CCGGTCAGATTTTTTTCTGGGCTTGGTTCGGCTATGGCATCCTCTACTGTACCATACCGAATGGCTGGTCGCGGT
TTGTCTTCGTTATGGTCAGCCATATTGCGTCGTCGCCTCTGCATGTGCAGATTGTTTTATCTCATTTTGCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail