© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5804 |
| Gene name | |
| Location | Contig_48:120396..121758 |
| Strand | - |
| Gene length (bp) | 1362 |
| Transcript length (bp) | 1362 |
| Coding sequence length (bp) | 1362 |
| Protein length (aa) | 454 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 1.9E-11 | 110 | 249 |
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 1.3E-22 | 329 | 437 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTS8|YI7B_SCHPO | UPF0695 membrane protein C977.11/PB8B6.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.11 PE=3 SV=1 | 103 | 449 | 4.0E-34 |
| sp|Q08913|YO390_YEAST | UPF0695 membrane protein YOR390W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR390W PE=3 SV=1 | 113 | 452 | 1.0E-26 |
| sp|Q08991|YP279_YEAST | UPF0695 membrane protein YPL279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL279C PE=3 SV=1 | 113 | 452 | 5.0E-26 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 105 | 127 | 22 |
| 2 | 132 | 154 | 22 |
| 3 | 200 | 222 | 22 |
| 4 | 252 | 274 | 22 |
| 5 | 295 | 317 | 22 |
| 6 | 327 | 348 | 21 |
| 7 | 355 | 377 | 22 |
| 8 | 392 | 414 | 22 |
| 9 | 421 | 443 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5804 MEPTAPSHGVDSRKHTPNANQHASNANQQPYSVPDRWTNLDELAAPSPVENVADAPIHHTSLEAARSQDQNRTRS ANIGLAALDEDVPKDASQLRRVSARATQLYTISHLVFFSLLGTLARLGLTALTRYPNAPVIFSTVWANFGGSLVM GFLAEDRALFRQEWGTLPVQVGTDANRVGTSQDAAAAEAAKKAHLATKKTIPLYIGLATGFCGSFTSFSSFVRDI FLAMSNDLVAPGPGQSVAVGRNGGYSFMAMLAVIIATLALSLGGLVIGAHVAIAWAPMMPVIPYKFSRRLADPLV VLVAWGCWLGAVLLSIFPPHDFWRGRATFALVFAPPGCLLRFYLSLLLNAKAKAFPLGTFTANILGTALLAMAWD LAHGQVGGVGGCQVLQGIQDGFCGCLTTVSTWVAELNGLQRRSAHVYGVASVAVAFALTVIIMGGMRWTRGFDSL LCH* |
| Coding | >OphauB2|5804 ATGGAGCCCACGGCGCCCAGCCATGGCGTCGATTCTCGAAAACACACACCCAATGCAAATCAACACGCATCCAAC GCCAACCAGCAACCCTATAGCGTGCCAGACCGCTGGACCAATCTCGACGAGCTAGCTGCACCGAGCCCCGTGGAA AATGTCGCCGACGCGCCTATACACCACACCAGCCTCGAGGCGGCGCGCAGCCAGGACCAGAACCGGACAAGGAGT GCAAATATCGGCCTGGCGGCGCTAGACGAGGATGTACCCAAGGATGCTTCACAGCTGCGCCGCGTCTCGGCTCGG GCGACGCAGCTGTACACCATTTCACACCTCGTCTTCTTCTCCTTGCTCGGCACTCTGGCCCGGCTTGGTCTCACG GCGCTGACGCGGTATCCCAACGCGCCCGTAATTTTTAGCACAGTATGGGCCAATTTTGGAGGGAGCCTCGTCATG GGCTTCTTGGCCGAGGACCGCGCCCTCTTTCGCCAGGAGTGGGGGACGCTGCCGGTGCAAGTCGGGACAGACGCG AATCGAGTCGGCACCAGCCAAGACGCTGCTGCGGCAGAGGCGGCGAAAAAGGCGCACTTGGCCACCAAGAAGACC ATCCCCCTCTACATTGGCCTGGCGACTGGCTTCTGCGGCAGCTTCACCAGCTTCTCGAGCTTTGTGCGCGACATC TTCTTGGCCATGTCCAACGACTTGGTAGCGCCTGGGCCTGGGCAGTCGGTTGCAGTGGGCCGCAACGGCGGCTAT TCCTTCATGGCCATGCTGGCCGTGATTATTGCCACTCTTGCCCTCTCCCTCGGCGGCCTCGTCATTGGGGCCCAT GTGGCCATTGCTTGGGCACCCATGATGCCCGTCATCCCATACAAATTTAGCCGCCGACTGGCTGATCCCTTGGTC GTTCTTGTCGCCTGGGGCTGCTGGCTAGGCGCCGTCTTGCTCTCCATATTTCCTCCCCATGATTTCTGGCGCGGA CGAGCCACCTTTGCACTGGTATTCGCGCCTCCGGGGTGTCTGCTGCGCTTCTACCTATCGCTGCTGCTCAATGCC AAGGCCAAGGCGTTTCCCCTGGGGACCTTTACCGCCAATATACTGGGCACTGCACTACTGGCCATGGCATGGGAC CTGGCGCACGGACAGGTGGGAGGCGTGGGTGGCTGCCAGGTGCTGCAGGGGATCCAAGACGGCTTCTGCGGATGC TTGACGACGGTGTCGACATGGGTGGCTGAGCTGAATGGCCTGCAGCGGCGCAGTGCCCATGTGTATGGAGTGGCT AGTGTTGCTGTTGCGTTTGCTCTCACGGTAATCATTATGGGCGGCATGCGCTGGACTCGTGGCTTTGACTCGTTG CTCTGCCATTGA |
| Transcript | >OphauB2|5804 ATGGAGCCCACGGCGCCCAGCCATGGCGTCGATTCTCGAAAACACACACCCAATGCAAATCAACACGCATCCAAC GCCAACCAGCAACCCTATAGCGTGCCAGACCGCTGGACCAATCTCGACGAGCTAGCTGCACCGAGCCCCGTGGAA AATGTCGCCGACGCGCCTATACACCACACCAGCCTCGAGGCGGCGCGCAGCCAGGACCAGAACCGGACAAGGAGT GCAAATATCGGCCTGGCGGCGCTAGACGAGGATGTACCCAAGGATGCTTCACAGCTGCGCCGCGTCTCGGCTCGG GCGACGCAGCTGTACACCATTTCACACCTCGTCTTCTTCTCCTTGCTCGGCACTCTGGCCCGGCTTGGTCTCACG GCGCTGACGCGGTATCCCAACGCGCCCGTAATTTTTAGCACAGTATGGGCCAATTTTGGAGGGAGCCTCGTCATG GGCTTCTTGGCCGAGGACCGCGCCCTCTTTCGCCAGGAGTGGGGGACGCTGCCGGTGCAAGTCGGGACAGACGCG AATCGAGTCGGCACCAGCCAAGACGCTGCTGCGGCAGAGGCGGCGAAAAAGGCGCACTTGGCCACCAAGAAGACC ATCCCCCTCTACATTGGCCTGGCGACTGGCTTCTGCGGCAGCTTCACCAGCTTCTCGAGCTTTGTGCGCGACATC TTCTTGGCCATGTCCAACGACTTGGTAGCGCCTGGGCCTGGGCAGTCGGTTGCAGTGGGCCGCAACGGCGGCTAT TCCTTCATGGCCATGCTGGCCGTGATTATTGCCACTCTTGCCCTCTCCCTCGGCGGCCTCGTCATTGGGGCCCAT GTGGCCATTGCTTGGGCACCCATGATGCCCGTCATCCCATACAAATTTAGCCGCCGACTGGCTGATCCCTTGGTC GTTCTTGTCGCCTGGGGCTGCTGGCTAGGCGCCGTCTTGCTCTCCATATTTCCTCCCCATGATTTCTGGCGCGGA CGAGCCACCTTTGCACTGGTATTCGCGCCTCCGGGGTGTCTGCTGCGCTTCTACCTATCGCTGCTGCTCAATGCC AAGGCCAAGGCGTTTCCCCTGGGGACCTTTACCGCCAATATACTGGGCACTGCACTACTGGCCATGGCATGGGAC CTGGCGCACGGACAGGTGGGAGGCGTGGGTGGCTGCCAGGTGCTGCAGGGGATCCAAGACGGCTTCTGCGGATGC TTGACGACGGTGTCGACATGGGTGGCTGAGCTGAATGGCCTGCAGCGGCGCAGTGCCCATGTGTATGGAGTGGCT AGTGTTGCTGTTGCGTTTGCTCTCACGGTAATCATTATGGGCGGCATGCGCTGGACTCGTGGCTTTGACTCGTTG CTCTGCCATTGA |
| Gene | >OphauB2|5804 ATGGAGCCCACGGCGCCCAGCCATGGCGTCGATTCTCGAAAACACACACCCAATGCAAATCAACACGCATCCAAC GCCAACCAGCAACCCTATAGCGTGCCAGACCGCTGGACCAATCTCGACGAGCTAGCTGCACCGAGCCCCGTGGAA AATGTCGCCGACGCGCCTATACACCACACCAGCCTCGAGGCGGCGCGCAGCCAGGACCAGAACCGGACAAGGAGT GCAAATATCGGCCTGGCGGCGCTAGACGAGGATGTACCCAAGGATGCTTCACAGCTGCGCCGCGTCTCGGCTCGG GCGACGCAGCTGTACACCATTTCACACCTCGTCTTCTTCTCCTTGCTCGGCACTCTGGCCCGGCTTGGTCTCACG GCGCTGACGCGGTATCCCAACGCGCCCGTAATTTTTAGCACAGTATGGGCCAATTTTGGAGGGAGCCTCGTCATG GGCTTCTTGGCCGAGGACCGCGCCCTCTTTCGCCAGGAGTGGGGGACGCTGCCGGTGCAAGTCGGGACAGACGCG AATCGAGTCGGCACCAGCCAAGACGCTGCTGCGGCAGAGGCGGCGAAAAAGGCGCACTTGGCCACCAAGAAGACC ATCCCCCTCTACATTGGCCTGGCGACTGGCTTCTGCGGCAGCTTCACCAGCTTCTCGAGCTTTGTGCGCGACATC TTCTTGGCCATGTCCAACGACTTGGTAGCGCCTGGGCCTGGGCAGTCGGTTGCAGTGGGCCGCAACGGCGGCTAT TCCTTCATGGCCATGCTGGCCGTGATTATTGCCACTCTTGCCCTCTCCCTCGGCGGCCTCGTCATTGGGGCCCAT GTGGCCATTGCTTGGGCACCCATGATGCCCGTCATCCCATACAAATTTAGCCGCCGACTGGCTGATCCCTTGGTC GTTCTTGTCGCCTGGGGCTGCTGGCTAGGCGCCGTCTTGCTCTCCATATTTCCTCCCCATGATTTCTGGCGCGGA CGAGCCACCTTTGCACTGGTATTCGCGCCTCCGGGGTGTCTGCTGCGCTTCTACCTATCGCTGCTGCTCAATGCC AAGGCCAAGGCGTTTCCCCTGGGGACCTTTACCGCCAATATACTGGGCACTGCACTACTGGCCATGGCATGGGAC CTGGCGCACGGACAGGTGGGAGGCGTGGGTGGCTGCCAGGTGCTGCAGGGGATCCAAGACGGCTTCTGCGGATGC TTGACGACGGTGTCGACATGGGTGGCTGAGCTGAATGGCCTGCAGCGGCGCAGTGCCCATGTGTATGGAGTGGCT AGTGTTGCTGTTGCGTTTGCTCTCACGGTAATCATTATGGGCGGCATGCGCTGGACTCGTGGCTTTGACTCGTTG CTCTGCCATTGA |