Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5801
Gene name
LocationContig_48:113608..114603
Strand-
Gene length (bp)995
Transcript length (bp)858
Coding sequence length (bp)858
Protein length (aa) 286

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02900 LigB Catalytic LigB subunit of aromatic ring-opening dioxygenase 2.1E-34 8 264

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7XA48|DODA_PORGR 4,5-DOPA dioxygenase extradiol OS=Portulaca grandiflora GN=DODA PE=1 SV=1 44 257 1.0E-32
sp|Q70FG7|DODA_BETVU 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris GN=DODA PE=1 SV=1 9 276 2.0E-32
sp|Q949R4|DIOXL_ARATH Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1 9 255 5.0E-31
sp|I3PFJ3|DOD1U_BETVU 4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1 46 263 3.0E-28
sp|I3PFJ9|DOD1W_BETVU 4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1 46 263 3.0E-28
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Swissprot ID Swissprot Description Start End E-value
sp|Q7XA48|DODA_PORGR 4,5-DOPA dioxygenase extradiol OS=Portulaca grandiflora GN=DODA PE=1 SV=1 44 257 1.0E-32
sp|Q70FG7|DODA_BETVU 4,5-DOPA dioxygenase extradiol OS=Beta vulgaris GN=DODA PE=1 SV=1 9 276 2.0E-32
sp|Q949R4|DIOXL_ARATH Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1 9 255 5.0E-31
sp|I3PFJ3|DOD1U_BETVU 4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1 46 263 3.0E-28
sp|I3PFJ9|DOD1W_BETVU 4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1 46 263 3.0E-28
sp|B6F0W8|DODA_MIRJA 4,5-DOPA dioxygenase extradiol OS=Mirabilis jalapa GN=DOD PE=1 SV=1 46 255 2.0E-24
sp|P24197|YGID_ECOLI 4,5-DOPA dioxygenase extradiol OS=Escherichia coli (strain K12) GN=ygiD PE=1 SV=3 5 259 1.0E-23
sp|O74741|DIOXL_SCHPO 4,5-DOPA dioxygenase extradiol-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1709.16c PE=3 SV=2 45 259 4.0E-23
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GO

GO Term Description Terminal node
GO:0008198 ferrous iron binding Yes
GO:0006725 cellular aromatic compound metabolic process Yes
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0046872 metal ion binding No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0044237 cellular metabolic process No
GO:0005506 iron ion binding No
GO:0043167 ion binding No
GO:0046914 transition metal ion binding No
GO:0043169 cation binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 28 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6040
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3024
Ophiocordyceps australis map64 (Brazil) OphauB2|5801 (this protein)
Ophiocordyceps subramaniannii Hirsu2|1689

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5801
MPTAPVVALSHGGGPLPILGDPSHKSIIYSLKHRIPRILNLGTPLQPQAIILVTAHWQTATPHVSSSAQHELLYD
YSNFPPESYSLKYPAPGSPAIAQKVVDAFTAAGVKDPRLDPDRPWDHGVFVPLTLIHPQAQIPIVQVSVLQGEDV
AEHMRMGEALRSLREQNIAVIGSGFASLHNLQTMRDLRQVSHEERAKFKAQSDEWNDALTNAVKAEKKDRRHHLE
KWRKMPHADKMHPPNGGEHFMPLLVCAGAADDGEEMRSYKDEYLGMDILTYYWGGAHHGD*
Coding >OphauB2|5801
ATGCCTACTGCACCAGTTGTTGCGCTTTCGCATGGTGGAGGCCCCCTCCCCATCCTCGGCGACCCAAGCCACAAA
TCAATCATCTACTCTCTCAAGCACCGCATCCCTCGCATCCTCAACCTCGGCACCCCCCTCCAGCCCCAAGCCATC
ATCCTCGTCACCGCCCACTGGCAAACCGCAACCCCCCACGTCTCTTCATCTGCCCAGCACGAGCTCCTCTACGAC
TACTCCAACTTCCCCCCCGAGTCCTACTCCCTCAAGTATCCCGCTCCCGGCTCCCCCGCCATTGCCCAAAAAGTC
GTCGACGCCTTTACCGCCGCCGGCGTAAAGGATCCCCGTCTTGACCCCGACCGCCCCTGGGACCACGGCGTCTTT
GTCCCGCTTACCCTTATCCACCCACAGGCCCAGATCCCAATCGTCCAGGTCTCGGTCCTTCAGGGCGAAGACGTG
GCTGAGCACATGCGCATGGGCGAGGCCCTGCGTTCCCTTCGCGAGCAAAATATTGCAGTCATTGGCTCGGGCTTT
GCCTCGCTGCATAACCTGCAAACTATGCGCGACTTGCGCCAAGTCAGCCATGAGGAGCGCGCAAAGTTCAAGGCT
CAGTCGGATGAGTGGAACGATGCCCTCACTAATGCCGTCAAGGCGGAGAAGAAGGACCGCAGACACCACTTGGAA
AAGTGGAGAAAGATGCCCCATGCTGATAAAATGCATCCCCCAAATGGCGGCGAACACTTTATGCCCCTCTTGGTC
TGTGCTGGAGCTGCTGACGACGGCGAGGAGATGAGGTCCTACAAGGATGAGTATCTCGGCATGGACATTCTGACT
TATTACTGGGGAGGCGCCCACCACGGAGACTAG
Transcript >OphauB2|5801
ATGCCTACTGCACCAGTTGTTGCGCTTTCGCATGGTGGAGGCCCCCTCCCCATCCTCGGCGACCCAAGCCACAAA
TCAATCATCTACTCTCTCAAGCACCGCATCCCTCGCATCCTCAACCTCGGCACCCCCCTCCAGCCCCAAGCCATC
ATCCTCGTCACCGCCCACTGGCAAACCGCAACCCCCCACGTCTCTTCATCTGCCCAGCACGAGCTCCTCTACGAC
TACTCCAACTTCCCCCCCGAGTCCTACTCCCTCAAGTATCCCGCTCCCGGCTCCCCCGCCATTGCCCAAAAAGTC
GTCGACGCCTTTACCGCCGCCGGCGTAAAGGATCCCCGTCTTGACCCCGACCGCCCCTGGGACCACGGCGTCTTT
GTCCCGCTTACCCTTATCCACCCACAGGCCCAGATCCCAATCGTCCAGGTCTCGGTCCTTCAGGGCGAAGACGTG
GCTGAGCACATGCGCATGGGCGAGGCCCTGCGTTCCCTTCGCGAGCAAAATATTGCAGTCATTGGCTCGGGCTTT
GCCTCGCTGCATAACCTGCAAACTATGCGCGACTTGCGCCAAGTCAGCCATGAGGAGCGCGCAAAGTTCAAGGCT
CAGTCGGATGAGTGGAACGATGCCCTCACTAATGCCGTCAAGGCGGAGAAGAAGGACCGCAGACACCACTTGGAA
AAGTGGAGAAAGATGCCCCATGCTGATAAAATGCATCCCCCAAATGGCGGCGAACACTTTATGCCCCTCTTGGTC
TGTGCTGGAGCTGCTGACGACGGCGAGGAGATGAGGTCCTACAAGGATGAGTATCTCGGCATGGACATTCTGACT
TATTACTGGGGAGGCGCCCACCACGGAGACTAG
Gene >OphauB2|5801
ATGCCTACTGCACCAGTTGTTGCGCTTTCGCATGGTGGAGGTGAGTCTATTACTGCTTCAACCTCGTCTGCCCGA
GCATGTGCCCACCCCAACCGTGATATTCTTTCATCAACGATAAACCAACACTCTTCATCACACCCCAAAACAAAA
CCTCACTAACCCATTCCCCCCATCTAGGCCCCCTCCCCATCCTCGGCGACCCAAGCCACAAATCAATCATCTACT
CTCTCAAGCACCGCATCCCTCGCATCCTCAACCTCGGCACCCCCCTCCAGCCCCAAGCCATCATCCTCGTCACCG
CCCACTGGCAAACCGCAACCCCCCACGTCTCTTCATCTGCCCAGCACGAGCTCCTCTACGACTACTCCAACTTCC
CCCCCGAGTCCTACTCCCTCAAGTATCCCGCTCCCGGCTCCCCCGCCATTGCCCAAAAAGTCGTCGACGCCTTTA
CCGCCGCCGGCGTAAAGGATCCCCGTCTTGACCCCGACCGCCCCTGGGACCACGGCGTCTTTGTCCCGCTTACCC
TTATCCACCCACAGGCCCAGATCCCAATCGTCCAGGTCTCGGTCCTTCAGGGCGAAGACGTGGCTGAGCACATGC
GCATGGGCGAGGCCCTGCGTTCCCTTCGCGAGCAAAATATTGCAGTCATTGGCTCGGGCTTTGCCTCGCTGCATA
ACCTGCAAACTATGCGCGACTTGCGCCAAGTCAGCCATGAGGAGCGCGCAAAGTTCAAGGCTCAGTCGGATGAGT
GGAACGATGCCCTCACTAATGCCGTCAAGGCGGAGAAGAAGGACCGCAGACACCACTTGGAAAAGTGGAGAAAGA
TGCCCCATGCTGATAAAATGCATCCCCCAAATGGCGGCGAACACTTTATGCCCCTCTTGGTCTGTGCTGGAGCTG
CTGACGACGGCGAGGAGATGAGGTCCTACAAGGATGAGTATCTCGGCATGGACATTCTGACTTATTACTGGGGAG
GCGCCCACCACGGAGACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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