Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|5787
Gene name
Location	Contig_48:86277..87870
Strand	+
Gene length (bp)	1593
Transcript length (bp)	1593
Coding sequence length (bp)	1593
Protein length (aa)	531

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13002	LDB19	Arrestin_N terminal like	2.8E-38	159	334

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10347\|YDA5_SCHPO	Uncharacterized protein C1F12.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.05 PE=4 SV=1	100	488	6.0E-44
sp\|O60150\|YNSK_SCHPO	Uncharacterized protein C18H10.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC18H10.20c PE=1 SV=1	103	489	5.0E-43
sp\|Q75BI0\|LDB19_ASHGO	Protein LDB19 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=LDB19 PE=3 SV=1	77	335	7.0E-30
sp\|Q12502\|LDB19_YEAST	Protein LDB19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDB19 PE=1 SV=1	162	333	1.0E-20
sp\|Q12502\|LDB19_YEAST	Protein LDB19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDB19 PE=1 SV=1	431	488	2.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10347\|YDA5_SCHPO	Uncharacterized protein C1F12.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.05 PE=4 SV=1	100	488	6.0E-44
sp\|O60150\|YNSK_SCHPO	Uncharacterized protein C18H10.20c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC18H10.20c PE=1 SV=1	103	489	5.0E-43
sp\|Q75BI0\|LDB19_ASHGO	Protein LDB19 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=LDB19 PE=3 SV=1	77	335	7.0E-30
sp\|Q12502\|LDB19_YEAST	Protein LDB19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDB19 PE=1 SV=1	162	333	1.0E-20
sp\|Q12502\|LDB19_YEAST	Protein LDB19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDB19 PE=1 SV=1	431	488	2.0E-08
sp\|Q75BI0\|LDB19_ASHGO	Protein LDB19 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=LDB19 PE=3 SV=1	439	488	5.0E-08

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|5787 MPHRVANFLRTSSGTIPHIKKKKSTTAANELSRNSSLAPTRNNSLTTSPDDSDSDDHHSPRIMPDHLAEAIRRHH RLSFPFARSSGSSGASSSQGAGSGPVGLDWSVESPPIVFHGSAEDSTGALISGQMFMDVRAESVDVERFAACLEI RVVHRRPFQNHCVDCQRQTTELKAWRLLGHTTTMKRGRHLFPFSALLDGKLPASIDTPVISISYHFRAEAVLVHS PGSGPGSASPSASVTRVCFERPLDVKRSLPEPLYPHHSVRVFPPTNIKASAHYSAVIHPTGTNQLTLKLDGLLSR NEKARTVDLWRLKKLTWRLEETVKTRAPACDKHAAAGTTPPPSGSEDEAAKKTVARTETRILGEKQLHDGWKSDF GGTDGVVEMEFDFGVNQHQHHHQSSKSGPVSRYACDTKTPDGTEVTHSLLIELIVSKEYAPEGKTFLATQTGTGR ILRMHFAVVMTEFPGLGVSWDNEAPPVYQDVPPSPPGYSPCRDGESPVEYEELEALDARRSSFDHRRQPSAGNSS DGAED*
Coding	>OphauB2\|5787 ATGCCTCACCGCGTGGCCAACTTTTTGCGCACCTCGTCGGGCACTATCCCGCACATCAAGAAGAAGAAGTCGACA ACGGCTGCCAACGAGTTGTCGCGCAATAGTTCCCTCGCCCCCACGCGCAACAACTCTCTCACCACCAGCCCCGAC GACTCGGACTCGGACGACCACCACAGCCCCAGAATAATGCCGGACCACTTGGCCGAAGCCATTCGACGCCACCAC CGCCTCTCCTTTCCCTTTGCGCGCTCGAGTGGAAGCAGCGGCGCCTCGAGTTCCCAGGGCGCTGGCTCGGGCCCC GTTGGCCTCGACTGGAGCGTCGAGAGCCCGCCCATTGTCTTTCACGGATCGGCAGAGGACAGCACCGGCGCTCTC ATTTCGGGCCAAATGTTTATGGACGTGCGCGCCGAAAGCGTCGACGTGGAGCGCTTTGCCGCCTGTCTCGAGATT CGCGTCGTGCACCGCCGGCCCTTTCAGAATCACTGCGTCGACTGCCAGCGCCAGACGACGGAGCTCAAGGCCTGG CGTCTGCTGGGCCACACCACCACGATGAAGCGTGGCCGCCACTTGTTTCCCTTTTCTGCCCTGCTTGACGGCAAG CTGCCAGCCTCGATTGATACGCCCGTAATATCCATTTCCTACCACTTTCGTGCCGAGGCCGTTCTTGTCCACTCG CCCGGCTCCGGTCCCGGCTCTGCGTCGCCCTCGGCCTCGGTCACGCGCGTTTGCTTTGAGCGGCCCCTCGACGTT AAGCGCTCGCTGCCGGAGCCGCTCTACCCCCACCACTCGGTCCGTGTCTTCCCGCCAACAAACATCAAGGCCAGC GCACACTACAGCGCCGTTATTCACCCTACCGGCACCAACCAGCTTACCCTCAAGCTCGACGGCCTCTTGTCTCGC AACGAAAAGGCGCGGACGGTGGACCTGTGGCGCCTCAAGAAGCTGACGTGGCGCCTCGAAGAGACTGTAAAGACT CGTGCTCCGGCCTGTGACAAGCACGCCGCCGCGGGGACGACGCCTCCGCCAAGCGGCTCGGAGGATGAAGCCGCC AAGAAGACGGTGGCGCGCACCGAGACGCGCATCCTGGGCGAGAAGCAGCTGCACGACGGGTGGAAGTCTGACTTT GGCGGCACCGACGGCGTGGTGGAGATGGAGTTTGACTTTGGCGTCAACCAGCACCAGCACCACCACCAGTCGTCC AAGTCGGGTCCCGTGTCACGCTACGCCTGCGACACCAAGACGCCCGACGGCACCGAAGTGACGCACTCGCTGCTC ATTGAGCTCATTGTCTCCAAGGAATACGCACCCGAGGGCAAGACCTTTTTGGCCACGCAGACGGGCACAGGCCGC ATCTTGCGCATGCACTTTGCCGTGGTGATGACTGAGTTTCCCGGTCTGGGCGTCAGCTGGGACAATGAGGCGCCG CCCGTGTACCAAGACGTGCCGCCCAGTCCGCCGGGGTACTCGCCGTGCCGCGATGGCGAGTCGCCGGTTGAGTAT GAGGAGCTGGAGGCGCTGGATGCGCGGCGGTCGAGCTTTGATCACAGGCGGCAGCCGTCGGCAGGGAATAGCAGT GATGGAGCTGAAGATTGA
Transcript	>OphauB2\|5787 ATGCCTCACCGCGTGGCCAACTTTTTGCGCACCTCGTCGGGCACTATCCCGCACATCAAGAAGAAGAAGTCGACA ACGGCTGCCAACGAGTTGTCGCGCAATAGTTCCCTCGCCCCCACGCGCAACAACTCTCTCACCACCAGCCCCGAC GACTCGGACTCGGACGACCACCACAGCCCCAGAATAATGCCGGACCACTTGGCCGAAGCCATTCGACGCCACCAC CGCCTCTCCTTTCCCTTTGCGCGCTCGAGTGGAAGCAGCGGCGCCTCGAGTTCCCAGGGCGCTGGCTCGGGCCCC GTTGGCCTCGACTGGAGCGTCGAGAGCCCGCCCATTGTCTTTCACGGATCGGCAGAGGACAGCACCGGCGCTCTC ATTTCGGGCCAAATGTTTATGGACGTGCGCGCCGAAAGCGTCGACGTGGAGCGCTTTGCCGCCTGTCTCGAGATT CGCGTCGTGCACCGCCGGCCCTTTCAGAATCACTGCGTCGACTGCCAGCGCCAGACGACGGAGCTCAAGGCCTGG CGTCTGCTGGGCCACACCACCACGATGAAGCGTGGCCGCCACTTGTTTCCCTTTTCTGCCCTGCTTGACGGCAAG CTGCCAGCCTCGATTGATACGCCCGTAATATCCATTTCCTACCACTTTCGTGCCGAGGCCGTTCTTGTCCACTCG CCCGGCTCCGGTCCCGGCTCTGCGTCGCCCTCGGCCTCGGTCACGCGCGTTTGCTTTGAGCGGCCCCTCGACGTT AAGCGCTCGCTGCCGGAGCCGCTCTACCCCCACCACTCGGTCCGTGTCTTCCCGCCAACAAACATCAAGGCCAGC GCACACTACAGCGCCGTTATTCACCCTACCGGCACCAACCAGCTTACCCTCAAGCTCGACGGCCTCTTGTCTCGC AACGAAAAGGCGCGGACGGTGGACCTGTGGCGCCTCAAGAAGCTGACGTGGCGCCTCGAAGAGACTGTAAAGACT CGTGCTCCGGCCTGTGACAAGCACGCCGCCGCGGGGACGACGCCTCCGCCAAGCGGCTCGGAGGATGAAGCCGCC AAGAAGACGGTGGCGCGCACCGAGACGCGCATCCTGGGCGAGAAGCAGCTGCACGACGGGTGGAAGTCTGACTTT GGCGGCACCGACGGCGTGGTGGAGATGGAGTTTGACTTTGGCGTCAACCAGCACCAGCACCACCACCAGTCGTCC AAGTCGGGTCCCGTGTCACGCTACGCCTGCGACACCAAGACGCCCGACGGCACCGAAGTGACGCACTCGCTGCTC ATTGAGCTCATTGTCTCCAAGGAATACGCACCCGAGGGCAAGACCTTTTTGGCCACGCAGACGGGCACAGGCCGC ATCTTGCGCATGCACTTTGCCGTGGTGATGACTGAGTTTCCCGGTCTGGGCGTCAGCTGGGACAATGAGGCGCCG CCCGTGTACCAAGACGTGCCGCCCAGTCCGCCGGGGTACTCGCCGTGCCGCGATGGCGAGTCGCCGGTTGAGTAT GAGGAGCTGGAGGCGCTGGATGCGCGGCGGTCGAGCTTTGATCACAGGCGGCAGCCGTCGGCAGGGAATAGCAGT GATGGAGCTGAAGATTGA
Gene	>OphauB2\|5787 ATGCCTCACCGCGTGGCCAACTTTTTGCGCACCTCGTCGGGCACTATCCCGCACATCAAGAAGAAGAAGTCGACA ACGGCTGCCAACGAGTTGTCGCGCAATAGTTCCCTCGCCCCCACGCGCAACAACTCTCTCACCACCAGCCCCGAC GACTCGGACTCGGACGACCACCACAGCCCCAGAATAATGCCGGACCACTTGGCCGAAGCCATTCGACGCCACCAC CGCCTCTCCTTTCCCTTTGCGCGCTCGAGTGGAAGCAGCGGCGCCTCGAGTTCCCAGGGCGCTGGCTCGGGCCCC GTTGGCCTCGACTGGAGCGTCGAGAGCCCGCCCATTGTCTTTCACGGATCGGCAGAGGACAGCACCGGCGCTCTC ATTTCGGGCCAAATGTTTATGGACGTGCGCGCCGAAAGCGTCGACGTGGAGCGCTTTGCCGCCTGTCTCGAGATT CGCGTCGTGCACCGCCGGCCCTTTCAGAATCACTGCGTCGACTGCCAGCGCCAGACGACGGAGCTCAAGGCCTGG CGTCTGCTGGGCCACACCACCACGATGAAGCGTGGCCGCCACTTGTTTCCCTTTTCTGCCCTGCTTGACGGCAAG CTGCCAGCCTCGATTGATACGCCCGTAATATCCATTTCCTACCACTTTCGTGCCGAGGCCGTTCTTGTCCACTCG CCCGGCTCCGGTCCCGGCTCTGCGTCGCCCTCGGCCTCGGTCACGCGCGTTTGCTTTGAGCGGCCCCTCGACGTT AAGCGCTCGCTGCCGGAGCCGCTCTACCCCCACCACTCGGTCCGTGTCTTCCCGCCAACAAACATCAAGGCCAGC GCACACTACAGCGCCGTTATTCACCCTACCGGCACCAACCAGCTTACCCTCAAGCTCGACGGCCTCTTGTCTCGC AACGAAAAGGCGCGGACGGTGGACCTGTGGCGCCTCAAGAAGCTGACGTGGCGCCTCGAAGAGACTGTAAAGACT CGTGCTCCGGCCTGTGACAAGCACGCCGCCGCGGGGACGACGCCTCCGCCAAGCGGCTCGGAGGATGAAGCCGCC AAGAAGACGGTGGCGCGCACCGAGACGCGCATCCTGGGCGAGAAGCAGCTGCACGACGGGTGGAAGTCTGACTTT GGCGGCACCGACGGCGTGGTGGAGATGGAGTTTGACTTTGGCGTCAACCAGCACCAGCACCACCACCAGTCGTCC AAGTCGGGTCCCGTGTCACGCTACGCCTGCGACACCAAGACGCCCGACGGCACCGAAGTGACGCACTCGCTGCTC ATTGAGCTCATTGTCTCCAAGGAATACGCACCCGAGGGCAAGACCTTTTTGGCCACGCAGACGGGCACAGGCCGC ATCTTGCGCATGCACTTTGCCGTGGTGATGACTGAGTTTCCCGGTCTGGGCGTCAGCTGGGACAATGAGGCGCCG CCCGTGTACCAAGACGTGCCGCCCAGTCCGCCGGGGTACTCGCCGTGCCGCGATGGCGAGTCGCCGGTTGAGTAT GAGGAGCTGGAGGCGCTGGATGCGCGGCGGTCGAGCTTTGATCACAGGCGGCAGCCGTCGGCAGGGAATAGCAGT GATGGAGCTGAAGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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