Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|577
Gene name
LocationContig_11:138417..140691
Strand+
Gene length (bp)2274
Transcript length (bp)1908
Coding sequence length (bp)1908
Protein length (aa) 636

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02190 LON_substr_bdg ATP-dependent protease La (LON) substrate-binding domain 2.1E-24 353 617
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 6.6E-10 263 300
PF13445 zf-RING_UBOX RING-type zinc-finger 1.1E-08 263 298
PF14634 zf-RING_5 zinc-RING finger domain 1.8E-06 263 302
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 9.8E-07 263 300
PF13639 zf-RING_2 Ring finger domain 1.9E-06 262 301
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.2E-06 260 303

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens GN=LONRF1 PE=1 SV=2 259 467 2.0E-46
sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2 SV=1 259 467 8.0E-46
sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens GN=LONRF3 PE=1 SV=1 259 467 9.0E-46
sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1 259 467 2.0E-45
sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=3 260 464 2.0E-38
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q17RB8|LONF1_HUMAN LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens GN=LONRF1 PE=1 SV=2 259 467 2.0E-46
sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2 SV=1 259 467 8.0E-46
sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens GN=LONRF3 PE=1 SV=1 259 467 9.0E-46
sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1 259 467 2.0E-45
sp|Q1L5Z9|LONF2_HUMAN LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=3 260 464 2.0E-38
sp|O60106|YOXA_SCHPO LON peptidase N-terminal domain and RING finger protein C14F5.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC14F5.10c PE=3 SV=1 73 457 4.0E-34
sp|Q5R4I2|RNF8_PONAB E3 ubiquitin-protein ligase RNF8 OS=Pongo abelii GN=RNF8 PE=2 SV=1 214 347 2.0E-08
sp|O76064|RNF8_HUMAN E3 ubiquitin-protein ligase RNF8 OS=Homo sapiens GN=RNF8 PE=1 SV=1 214 343 3.0E-08
sp|Q03605|YNN1_CAEEL Uncharacterized RING finger protein T02C1.1 OS=Caenorhabditis elegans GN=T02C1.1 PE=3 SV=1 257 352 2.0E-07
sp|Q4KLN8|RNF8_RAT E3 ubiquitin-protein ligase RNF8 OS=Rattus norvegicus GN=Rnf8 PE=2 SV=1 223 343 2.0E-07
sp|Q8VC56|RNF8_MOUSE E3 ubiquitin-protein ligase RNF8 OS=Mus musculus GN=Rnf8 PE=1 SV=1 223 343 3.0E-07
sp|Q2HJ46|RNF8_BOVIN E3 ubiquitin-protein ligase RNF8 OS=Bos taurus GN=RNF8 PE=2 SV=1 244 343 4.0E-07
sp|Q6CHI1|RAD18_YARLI Postreplication repair E3 ubiquitin-protein ligase RAD18 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RAD18 PE=3 SV=1 241 328 4.0E-07
sp|Q6NRG0|RNF8B_XENLA E3 ubiquitin-protein ligase RNF8-B OS=Xenopus laevis GN=rnf8-b PE=2 SV=1 244 371 5.0E-07
sp|Q9P3U8|YJ95_SCHPO Uncharacterized RING finger protein C548.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC548.05c PE=3 SV=1 246 308 6.0E-07
sp|Q4WZJ6|RAD18_ASPFU Postreplication repair E3 ubiquitin-protein ligase rad18 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rad18 PE=3 SV=1 242 328 7.0E-07
sp|Q7ZX20|RNF8A_XENLA E3 ubiquitin-protein ligase RNF8-A OS=Xenopus laevis GN=rnf8-a PE=2 SV=1 244 371 8.0E-07
sp|Q91431|NF7O_XENLA Nuclear factor 7, ovary OS=Xenopus laevis PE=2 SV=1 234 315 9.0E-07
sp|Q5ZMD4|TRI59_CHICK Tripartite motif-containing protein 59 OS=Gallus gallus GN=TRIM59 PE=2 SV=1 257 328 2.0E-06
sp|Q810I2|TRI50_MOUSE E3 ubiquitin-protein ligase TRIM50 OS=Mus musculus GN=Trim50 PE=2 SV=1 257 328 3.0E-06
sp|A6NGJ6|TRI64_HUMAN Tripartite motif-containing protein 64 OS=Homo sapiens GN=TRIM64 PE=2 SV=4 255 314 4.0E-06
sp|Q61510|TRI25_MOUSE E3 ubiquitin/ISG15 ligase TRIM25 OS=Mus musculus GN=Trim25 PE=1 SV=2 257 332 4.0E-06
sp|Q02398|RAD18_EMENI Postreplication repair E3 ubiquitin-protein ligase rad18 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=uvsH PE=2 SV=1 250 328 4.0E-06
sp|A6NI03|TR64B_HUMAN Putative tripartite motif-containing protein 64B OS=Homo sapiens GN=TRIM64B PE=5 SV=3 255 314 4.0E-06
sp|Q7YR32|TRI10_PANTR Tripartite motif-containing protein 10 OS=Pan troglodytes GN=TRIM10 PE=3 SV=1 251 339 4.0E-06
sp|Q9UDY6|TRI10_HUMAN Tripartite motif-containing protein 10 OS=Homo sapiens GN=TRIM10 PE=1 SV=3 251 339 5.0E-06
sp|Q1XH17|TRI72_MOUSE Tripartite motif-containing protein 72 OS=Mus musculus GN=Trim72 PE=1 SV=1 257 312 5.0E-06
sp|Q99PQ1|TR12A_MOUSE Tripartite motif-containing protein 12A OS=Mus musculus GN=Trim12a PE=2 SV=1 251 326 6.0E-06
sp|Q14258|TRI25_HUMAN E3 ubiquitin/ISG15 ligase TRIM25 OS=Homo sapiens GN=TRIM25 PE=1 SV=2 257 333 7.0E-06
sp|A0JPQ4|TRI72_RAT Tripartite motif-containing protein 72 OS=Rattus norvegicus GN=Trim72 PE=1 SV=1 257 312 7.0E-06
sp|Q9WUH5|TRI10_MOUSE Tripartite motif-containing protein 10 OS=Mus musculus GN=Trim10 PE=2 SV=2 256 344 7.0E-06
sp|A6NLI5|TR64C_HUMAN Putative tripartite motif-containing protein 64C OS=Homo sapiens GN=TRIM64C PE=5 SV=3 246 302 7.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|577
MASHQADLGPQSPANVCGVASAPPSLSDHHPDQQRRQPSDSLRRPSPQAPAEPPPWLPKHSDQAQTAADSVDALL
DKTRAIVRLFQCHCCSIPYTSAYTLPCGRSICKRCLPRTHARNSITYPASPVRLEAFECPFDDCDKQHVLDDCSL
DVIVNKTAAIFVDAIKLARSEALALHLLTHVAVQDAWRLAGLSSLRQSGMAPKTVAGGRLLATWTLAEAGELDYG
AELVHRHVPVPGAPQEPDAYDAQTLAALQKAMRNEMDCQICYGLFIDPLTTGCGHTFCRSCLHRVLDHSRCCPVC
RRALSINPLLKRSSCPSNYFISNLVETFWSTELKSRKALLAAEAALRQTELNLPLFVCTLAFPYMPTFLHIFEPR
YRLMIRRALEGDRTFGMVLPKPQRRSGDAHFCELGTLLRIVNAQFYPDGRSLIETVGLSRFRVVRYGLLDGYTVA
KTERVDDVSVEEEEALEATEVGYDADLDTAGNANLVVLDQGGQDAHDNDSDSKTLHSGGEPLAATDSLLHRPSTT
RREGRPLTIEDLNMMSTESLICFAKDFVRRMGQQSARWMTDRMLAIYGECPDDPIVFPWWFASTLPVKEYEKYRL
LATSSVRERFKICALWILEIQRSHWSRSLQDCVIL*
Coding >OphauB2|577
ATGGCGTCGCATCAAGCCGACCTTGGGCCCCAAAGTCCAGCCAATGTGTGCGGCGTTGCCTCCGCGCCGCCATCG
CTATCGGACCACCACCCGGATCAGCAGCGTCGCCAGCCGTCAGACTCGCTTCGTCGCCCGAGCCCCCAAGCGCCA
GCCGAGCCGCCGCCCTGGCTGCCCAAGCACTCGGACCAGGCGCAAACGGCAGCCGACAGCGTCGACGCGCTGCTC
GACAAGACGCGCGCCATTGTCCGCCTCTTCCAGTGCCACTGCTGCTCCATCCCATATACCAGCGCCTATACGCTG
CCCTGCGGCCGCAGCATCTGCAAACGGTGCTTGCCGCGCACCCACGCCCGCAATAGCATCACCTATCCCGCCTCG
CCCGTTCGCCTCGAGGCCTTTGAGTGTCCCTTTGACGACTGCGATAAGCAGCACGTGCTTGACGACTGCTCGCTA
GACGTCATTGTCAACAAGACGGCCGCCATCTTTGTCGACGCCATCAAGCTGGCTAGAAGCGAGGCTCTCGCCCTC
CACCTCTTGACCCATGTTGCCGTGCAAGACGCTTGGCGCCTGGCTGGCCTTTCCTCCCTGCGCCAGAGCGGCATG
GCGCCCAAGACTGTGGCGGGTGGGAGGCTCTTGGCCACCTGGACTCTGGCCGAAGCTGGCGAGCTGGATTACGGC
GCCGAGCTTGTACATCGCCACGTCCCTGTGCCTGGCGCACCCCAGGAGCCCGATGCCTACGACGCCCAGACTCTT
GCCGCGCTGCAAAAGGCGATGCGCAACGAAATGGACTGCCAAATATGCTATGGGCTCTTTATTGACCCTCTGACG
ACTGGCTGCGGCCATACATTTTGCCGCTCATGTCTGCATCGCGTCCTTGACCATTCGCGCTGTTGTCCCGTCTGC
CGCCGGGCGCTGTCCATCAACCCGCTCCTCAAGCGCTCCTCGTGCCCATCAAACTACTTCATCTCCAATCTCGTC
GAGACGTTTTGGAGCACCGAGCTCAAGTCTCGCAAAGCGCTGCTTGCTGCAGAGGCGGCCTTGCGCCAGACGGAG
CTCAACCTGCCGCTCTTTGTCTGCACTCTAGCCTTTCCCTACATGCCCACCTTTCTTCACATTTTTGAGCCGCGC
TACCGCCTCATGATTCGTCGGGCCCTCGAGGGCGACAGGACCTTTGGCATGGTGCTCCCCAAGCCACAGCGGCGC
AGTGGAGATGCCCACTTTTGCGAATTGGGCACGCTGCTTCGCATTGTCAATGCCCAGTTTTACCCAGACGGCAGA
AGCCTCATTGAGACGGTTGGCCTGTCGCGCTTTCGCGTGGTGCGCTATGGCTTGCTCGACGGATACACGGTTGCC
AAGACGGAGCGCGTCGACGACGTGAGCGTCGAGGAGGAAGAGGCGCTGGAAGCGACTGAAGTGGGCTACGATGCC
GACCTTGACACGGCGGGCAATGCCAATCTCGTCGTCTTGGACCAGGGCGGCCAAGACGCACATGACAATGACAGC
GACTCCAAGACGCTCCATTCGGGGGGCGAGCCATTGGCCGCCACGGATTCTCTCCTCCACAGGCCGTCTACTACA
AGGCGAGAGGGCAGACCCCTGACGATTGAGGACCTCAACATGATGTCAACGGAGAGTCTGATTTGCTTCGCAAAG
GACTTTGTGCGGCGCATGGGGCAGCAGAGCGCGCGGTGGATGACGGATCGAATGCTGGCCATTTATGGCGAGTGT
CCCGATGACCCCATTGTTTTCCCCTGGTGGTTTGCCAGCACTCTGCCTGTCAAGGAGTACGAAAAGTACCGCCTC
TTGGCAACGTCTAGTGTGCGTGAGAGGTTCAAGATTTGCGCTCTGTGGATCTTGGAAATTCAGCGGTCACACTGG
TCTAGGTCTCTTCAGGATTGTGTCATTCTCTAG
Transcript >OphauB2|577
ATGGCGTCGCATCAAGCCGACCTTGGGCCCCAAAGTCCAGCCAATGTGTGCGGCGTTGCCTCCGCGCCGCCATCG
CTATCGGACCACCACCCGGATCAGCAGCGTCGCCAGCCGTCAGACTCGCTTCGTCGCCCGAGCCCCCAAGCGCCA
GCCGAGCCGCCGCCCTGGCTGCCCAAGCACTCGGACCAGGCGCAAACGGCAGCCGACAGCGTCGACGCGCTGCTC
GACAAGACGCGCGCCATTGTCCGCCTCTTCCAGTGCCACTGCTGCTCCATCCCATATACCAGCGCCTATACGCTG
CCCTGCGGCCGCAGCATCTGCAAACGGTGCTTGCCGCGCACCCACGCCCGCAATAGCATCACCTATCCCGCCTCG
CCCGTTCGCCTCGAGGCCTTTGAGTGTCCCTTTGACGACTGCGATAAGCAGCACGTGCTTGACGACTGCTCGCTA
GACGTCATTGTCAACAAGACGGCCGCCATCTTTGTCGACGCCATCAAGCTGGCTAGAAGCGAGGCTCTCGCCCTC
CACCTCTTGACCCATGTTGCCGTGCAAGACGCTTGGCGCCTGGCTGGCCTTTCCTCCCTGCGCCAGAGCGGCATG
GCGCCCAAGACTGTGGCGGGTGGGAGGCTCTTGGCCACCTGGACTCTGGCCGAAGCTGGCGAGCTGGATTACGGC
GCCGAGCTTGTACATCGCCACGTCCCTGTGCCTGGCGCACCCCAGGAGCCCGATGCCTACGACGCCCAGACTCTT
GCCGCGCTGCAAAAGGCGATGCGCAACGAAATGGACTGCCAAATATGCTATGGGCTCTTTATTGACCCTCTGACG
ACTGGCTGCGGCCATACATTTTGCCGCTCATGTCTGCATCGCGTCCTTGACCATTCGCGCTGTTGTCCCGTCTGC
CGCCGGGCGCTGTCCATCAACCCGCTCCTCAAGCGCTCCTCGTGCCCATCAAACTACTTCATCTCCAATCTCGTC
GAGACGTTTTGGAGCACCGAGCTCAAGTCTCGCAAAGCGCTGCTTGCTGCAGAGGCGGCCTTGCGCCAGACGGAG
CTCAACCTGCCGCTCTTTGTCTGCACTCTAGCCTTTCCCTACATGCCCACCTTTCTTCACATTTTTGAGCCGCGC
TACCGCCTCATGATTCGTCGGGCCCTCGAGGGCGACAGGACCTTTGGCATGGTGCTCCCCAAGCCACAGCGGCGC
AGTGGAGATGCCCACTTTTGCGAATTGGGCACGCTGCTTCGCATTGTCAATGCCCAGTTTTACCCAGACGGCAGA
AGCCTCATTGAGACGGTTGGCCTGTCGCGCTTTCGCGTGGTGCGCTATGGCTTGCTCGACGGATACACGGTTGCC
AAGACGGAGCGCGTCGACGACGTGAGCGTCGAGGAGGAAGAGGCGCTGGAAGCGACTGAAGTGGGCTACGATGCC
GACCTTGACACGGCGGGCAATGCCAATCTCGTCGTCTTGGACCAGGGCGGCCAAGACGCACATGACAATGACAGC
GACTCCAAGACGCTCCATTCGGGGGGCGAGCCATTGGCCGCCACGGATTCTCTCCTCCACAGGCCGTCTACTACA
AGGCGAGAGGGCAGACCCCTGACGATTGAGGACCTCAACATGATGTCAACGGAGAGTCTGATTTGCTTCGCAAAG
GACTTTGTGCGGCGCATGGGGCAGCAGAGCGCGCGGTGGATGACGGATCGAATGCTGGCCATTTATGGCGAGTGT
CCCGATGACCCCATTGTTTTCCCCTGGTGGTTTGCCAGCACTCTGCCTGTCAAGGAGTACGAAAAGTACCGCCTC
TTGGCAACGTCTAGTGTGCGTGAGAGGTTCAAGATTTGCGCTCTGTGGATCTTGGAAATTCAGCGGTCACACTGG
TCTAGGTCTCTTCAGGATTGTGTCATTCTCTAG
Gene >OphauB2|577
ATGGCGTCGCATCAAGCCGACCTTGGGCCCCAAAGTCCAGCCAATGTGTGCGGCGTTGCCTCCGCGCCGCCATCG
CTATCGGACCACCACCCGGATCAGCAGCGTCGCCAGCCGTCAGACTCGCTTCGTCGCCCGAGCCCCCAAGCGCCA
GCCGAGCCGCCGCCCTGGCTGCCCAAGCACTCGGACCAGGCGCAAACGGCAGCCGACAGCGTCGACGCGCTGCTC
GACAAGACGCGCGCCATTGTCCGCCTCTTCCAGTGCCACTGCTGCTCCATCCCATATACCAGCGCCTATACGCTG
CCCTGCGGCCGCAGCATCTGCAAACGGTGCTTGCCGCGCACCCACGCCCGCAATAGCATCACCTATCCCGCCTCG
CCCGTTCGCCTCGAGGCCTTTGAGTGTCCCTTTGACGACTGCGATAAGCAGCACGTGCTTGACGACTGCTCGCTA
GACGTCATTGTCAACAAGACGGCCGCCATCTTTGTCGACGCCATCAAGCTGGCTAGAAGCGAGGCTCTCGCCCTC
CACCTCTTGACCCATGTTGCCGTGCAAGACGCTTGGCGCCTGGCTGGCCTTTCCTCCCTGCGCCAGAGCGGCATG
GCGCCCAAGACTGTGGCGGGTGGGAGGCTCTTGGCCACCTGGACTCTGGCCGAAGCTGGCGAGCTGGATTACGGC
GCCGAGCTTGTACATCGCCACGTCCCTGTGCCTGGCGCACCCCAGGAGCCCGATGCCTACGACGCCCAGACTCTT
GCCGCGCTGCAAAAGGCGATGCGCAACGAAATGGACTGCCAAATATGCTATGGGCTCTTTATTGACCCTCTGACG
ACTGGCTGCGGCCATACATTTTGCCGCTCATGTCTGCATCGCGTCCTTGACCATTCGCGCTGTTGTCCCGTCTGC
CGCCGGGCGCTGTCCATCAACCCGCTCCTCAAGCGCTCCTCGTGCCCATCAAACTACTTCATCTCCAATCTCGTC
GAGACGTTTTGGAGCACCGAGCTCAAGTCTCGCAAAGCGCTGCTTGCTGCAGAGGCGGCCTTGCGCCAGACGGAG
CTCAACCTGCCGCTCTTTGTCTGCACTCTAGCCTTTCCCTACATGCCCACCTTTCTTCACATTTTTGAGCCGCGC
TACCGCCTCATGATTCGTCGGGCCCTCGAGGGCGACAGGACCTTTGGCATGGTGCTCCCCAAGCCACAGCGGCGC
AGTGGAGATGCCCACTTTTGCGAATTGGGCACGCTGCTTCGCATTGTCAATGCCCAGTTTTACCCAGACGGCAGA
AGCCTCATTGAGACGGTTGGCCTGTCGCGCTTTCGCGTGGTGCGCTATGGCTTGCTCGACGGATACACGGTTGCC
AAGACGGAGCGCGTCGACGACGTGAGCGTCGAGGAGGAAGAGGCGCTGGAAGCGACTGAAGTGGGCTACGATGCC
GACCTTGACACGGCGGGCAATGCCAATCTCGTCGTCTTGGACCAGGGCGGCCAAGACGCACATGACAATGACAGC
GACTCCAAGACGCTCCATTCGGGGGGCGAGCCATTGGCCGCCACGGATTCTCTCCTCCACAGGCCGTCTACTACA
AGGCGAGAGGGCAGACCCCTGACGATTGAGGACCTCAACATGATGTCAACGGAGAGTCTGATTTGCTTCGCAAAG
GACTTTGTGCGGCGCATGGGGCAGCAGAGCGCGCGGTGGATGACGGATCGAATGCTGGCCATTTATGGCGAGTGT
CCCGATGACCCCATTGTTTTCCCCTGGTGGTTTGCCAGCACTCTGCCTGTCAAGGAGTACGAAAAGTACCGCCTC
TTGGCAACGTCTAGTGTGCGTGAGAGGTTCAAGATTTGCGCTCTGTGGATCTTGGAAATTCAGCGGTCACACTGG
TGAGTCGCCACTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGAAAAAAA
GAGAGGGCTTTTTGAAGAAGGAATTCTTCTTTTGGCTCTTGACGGAAAAGAAAAGGGCTTTTTGAAGAAGAAATT
CTTCTTTTGGCTCTAGAGGGAAAGGAAAAGGTGTCGACGCTCGTGTTTTTTGCTCTCGTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGCAAATCAGTGACTTTGTTAGTAGTGCTTGTCAGGAGTGACTGACCAAAGACGGCCTCAGGTCTAGGTCT
CTTCAGGATTGTGTCATTCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail