© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5768 |
| Gene name | |
| Location | Contig_48:28734..29337 |
| Strand | + |
| Gene length (bp) | 603 |
| Transcript length (bp) | 603 |
| Coding sequence length (bp) | 603 |
| Protein length (aa) | 201 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12430 | ABA_GPCR | Abscisic acid G-protein coupled receptor | 1.0E-35 | 25 | 183 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5X1G3|GPHR_SALSA | Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 | 27 | 184 | 9.0E-16 |
| sp|Q8BS95|GPHR_MOUSE | Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 | 27 | 184 | 2.0E-15 |
| sp|P0CG08|GPHRB_HUMAN | Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1 | 27 | 184 | 2.0E-15 |
| sp|B7ZAQ6|GPHRA_HUMAN | Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2 | 27 | 184 | 2.0E-15 |
| sp|Q5F448|GPHR_CHICK | Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 | 27 | 184 | 2.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5X1G3|GPHR_SALSA | Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 | 27 | 184 | 9.0E-16 |
| sp|Q8BS95|GPHR_MOUSE | Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 | 27 | 184 | 2.0E-15 |
| sp|P0CG08|GPHRB_HUMAN | Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1 | 27 | 184 | 2.0E-15 |
| sp|B7ZAQ6|GPHRA_HUMAN | Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2 | 27 | 184 | 2.0E-15 |
| sp|Q5F448|GPHR_CHICK | Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 | 27 | 184 | 2.0E-15 |
| sp|B2ZXD5|GPHR_CRIGR | Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1 | 27 | 184 | 3.0E-15 |
| sp|Q6DDW6|GPHR_XENLA | Golgi pH regulator OS=Xenopus laevis GN=gpr89-b PE=2 SV=1 | 27 | 184 | 3.0E-15 |
| sp|Q5BIM9|GPHR_BOVIN | Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2 | 27 | 184 | 3.0E-15 |
| sp|Q54QM5|GPHR_DICDI | Golgi pH regulator homolog OS=Dictyostelium discoideum GN=gpr89 PE=3 SV=1 | 41 | 168 | 6.0E-13 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 80 | 102 | 22 |
| 2 | 117 | 139 | 22 |
| 3 | 159 | 181 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5768 MGVEMQGLRALVNELREEERDKGSGVLAVYGGYRVVATSISALRRVCGAGGASDPISRAVGLVVRLWDPSIDQDA WSRAASFALVGCVLACSASTAAQTINLFSPSSSSSLSSAPALLALAQLAATYLLAASMLLRSLLPAPLLASRAAI LAALDTRFVDSWFDLCFLLGAAGSFCVLWAGRREDAWEAYGEEELGVKRL* |
| Coding | >OphauB2|5768 ATGGGGGTGGAAATGCAGGGGTTGAGGGCGTTGGTAAATGAGCTGAGAGAGGAGGAGAGGGATAAAGGGTCGGGA GTGTTGGCGGTGTATGGAGGTTACCGCGTCGTGGCAACGAGTATATCCGCTCTGCGGCGCGTGTGCGGTGCAGGC GGTGCCTCTGACCCCATAAGTCGCGCCGTGGGCCTCGTCGTCCGCCTCTGGGACCCATCCATTGACCAAGACGCC TGGTCCCGCGCCGCCAGCTTTGCCCTCGTGGGCTGCGTTCTCGCCTGCAGTGCCTCCACCGCCGCCCAAACCATT AATCTCTTCTCCCCTTCCTCCTCCTCCTCCCTCTCCTCTGCTCCCGCCCTCCTCGCCCTCGCCCAACTCGCAGCC ACCTACCTCCTCGCCGCCAGCATGCTCTTGCGCTCCCTCTTGCCCGCCCCGCTACTCGCCTCCCGCGCTGCCATT CTCGCCGCTCTGGATACGCGCTTCGTCGACTCGTGGTTCGACTTGTGCTTCTTGCTCGGCGCCGCGGGGTCCTTT TGCGTGCTGTGGGCGGGGAGGCGAGAGGATGCTTGGGAGGCGTATGGTGAGGAGGAGCTGGGCGTAAAGAGGTTG TGA |
| Transcript | >OphauB2|5768 ATGGGGGTGGAAATGCAGGGGTTGAGGGCGTTGGTAAATGAGCTGAGAGAGGAGGAGAGGGATAAAGGGTCGGGA GTGTTGGCGGTGTATGGAGGTTACCGCGTCGTGGCAACGAGTATATCCGCTCTGCGGCGCGTGTGCGGTGCAGGC GGTGCCTCTGACCCCATAAGTCGCGCCGTGGGCCTCGTCGTCCGCCTCTGGGACCCATCCATTGACCAAGACGCC TGGTCCCGCGCCGCCAGCTTTGCCCTCGTGGGCTGCGTTCTCGCCTGCAGTGCCTCCACCGCCGCCCAAACCATT AATCTCTTCTCCCCTTCCTCCTCCTCCTCCCTCTCCTCTGCTCCCGCCCTCCTCGCCCTCGCCCAACTCGCAGCC ACCTACCTCCTCGCCGCCAGCATGCTCTTGCGCTCCCTCTTGCCCGCCCCGCTACTCGCCTCCCGCGCTGCCATT CTCGCCGCTCTGGATACGCGCTTCGTCGACTCGTGGTTCGACTTGTGCTTCTTGCTCGGCGCCGCGGGGTCCTTT TGCGTGCTGTGGGCGGGGAGGCGAGAGGATGCTTGGGAGGCGTATGGTGAGGAGGAGCTGGGCGTAAAGAGGTTG TGA |
| Gene | >OphauB2|5768 ATGGGGGTGGAAATGCAGGGGTTGAGGGCGTTGGTAAATGAGCTGAGAGAGGAGGAGAGGGATAAAGGGTCGGGA GTGTTGGCGGTGTATGGAGGTTACCGCGTCGTGGCAACGAGTATATCCGCTCTGCGGCGCGTGTGCGGTGCAGGC GGTGCCTCTGACCCCATAAGTCGCGCCGTGGGCCTCGTCGTCCGCCTCTGGGACCCATCCATTGACCAAGACGCC TGGTCCCGCGCCGCCAGCTTTGCCCTCGTGGGCTGCGTTCTCGCCTGCAGTGCCTCCACCGCCGCCCAAACCATT AATCTCTTCTCCCCTTCCTCCTCCTCCTCCCTCTCCTCTGCTCCCGCCCTCCTCGCCCTCGCCCAACTCGCAGCC ACCTACCTCCTCGCCGCCAGCATGCTCTTGCGCTCCCTCTTGCCCGCCCCGCTACTCGCCTCCCGCGCTGCCATT CTCGCCGCTCTGGATACGCGCTTCGTCGACTCGTGGTTCGACTTGTGCTTCTTGCTCGGCGCCGCGGGGTCCTTT TGCGTGCTGTGGGCGGGGAGGCGAGAGGATGCTTGGGAGGCGTATGGTGAGGAGGAGCTGGGCGTAAAGAGGTTG TGA |