Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5759
Gene name
LocationContig_48:1721..4605
Strand-
Gene length (bp)2884
Transcript length (bp)2484
Coding sequence length (bp)2484
Protein length (aa) 828

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04841 Vps16_N Vps16, N-terminal region 4.7E-84 8 410
PF04840 Vps16_C Vps16, C-terminal region 2.6E-82 503 807

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UT38|VPS16_SCHPO Probable vacuolar protein sorting-associated protein 16 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps16 PE=3 SV=1 9 807 1.0E-173
sp|Q55C58|VPS16_DICDI Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2 8 796 1.0E-152
sp|Q9H269|VPS16_HUMAN Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens GN=VPS16 PE=1 SV=2 8 823 4.0E-139
sp|Q920Q4|VPS16_MOUSE Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus GN=Vps16 PE=1 SV=3 8 796 1.0E-138
sp|Q5E9L7|VPS16_BOVIN Vacuolar protein sorting-associated protein 16 homolog OS=Bos taurus GN=VPS16 PE=2 SV=1 8 823 8.0E-136
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UT38|VPS16_SCHPO Probable vacuolar protein sorting-associated protein 16 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps16 PE=3 SV=1 9 807 1.0E-173
sp|Q55C58|VPS16_DICDI Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2 8 796 1.0E-152
sp|Q9H269|VPS16_HUMAN Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens GN=VPS16 PE=1 SV=2 8 823 4.0E-139
sp|Q920Q4|VPS16_MOUSE Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus GN=Vps16 PE=1 SV=3 8 796 1.0E-138
sp|Q5E9L7|VPS16_BOVIN Vacuolar protein sorting-associated protein 16 homolog OS=Bos taurus GN=VPS16 PE=2 SV=1 8 823 8.0E-136
sp|Q93VQ0|VCL1_ARATH Protein VACUOLELESS1 OS=Arabidopsis thaliana GN=VCL1 PE=1 SV=1 1 797 3.0E-130
sp|Q03308|VPS16_YEAST Vacuolar protein sorting-associated protein 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS16 PE=1 SV=2 211 784 5.0E-57
sp|Q60V75|VPS16_CAEBR Vacuolar protein sorting-associated protein 16 homolog OS=Caenorhabditis briggsae GN=vps-16 PE=3 SV=1 72 768 9.0E-18
sp|Q11182|VPS16_CAEEL Vacuolar protein sorting-associated protein 16 homolog OS=Caenorhabditis elegans GN=vps-16 PE=3 SV=2 13 746 6.0E-16
[Show less]

GO

GO Term Description Terminal node
GO:0006886 intracellular protein transport Yes
GO:0005737 cytoplasm Yes
GO:0015031 protein transport No
GO:0051641 cellular localization No
GO:0046907 intracellular transport No
GO:0070727 cellular macromolecule localization No
GO:0005575 cellular_component No
GO:0045184 establishment of protein localization No
GO:0051649 establishment of localization in cell No
GO:0008150 biological_process No
GO:0071702 organic substance transport No
GO:0033036 macromolecule localization No
GO:0051179 localization No
GO:0110165 cellular anatomical entity No
GO:0006810 transport No
GO:0071705 nitrogen compound transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008104 protein localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5759
MDTLHARADWESVGDKWFRKTQQYTAVFDQDLDLDNFIIAGALYAGALAFWRDETKLQAHQPGKSTKPAIDIYSL
AGKKLRSIPWEKGLIKGLGWSEDESLLVVTADGDVRCYDLQGDFSNFSLGNGADVYGVVSCRFYNHGMVALLGNK
SFVTVSSYLEPRPKLLASAPEGEIHSWTIVPPHHTLSRSVEILLSIRSTIYILDATDCEDRLLDIGPFSHISVSP
DGRHVTLFGSNGKAHVISSDFQDKLFEHDSNSQTPPRYVEWCGDDALIAWEDEVHIIGPGDQSTSFIYDSTRVHV
ISEYDGARLITNDFCEFLERIPDYTMEVFGHASESSPASILLDAVGQLEMESPKADDYIQLIRPNLTEAVDTCVN
AAGREFDIKWQKRLLRAASFGKSVLDIYNSDEFVDMCETLRVLNAVRDYEIGLPLSFEQYHRLTPERLIQRLLSR
NEHLLALKIADYLKLPTGGIYQDWASTKVRVGAEDDDTICRLVVERLSEKPGISFEEIARAAYHEGRARLATELL
NHEPRGGRQVPLLLDMEKDDLALDKAIESGDTDLMLSVLMQLRKKLPLAAFFRVINSRPTATAMVEASAVREGDN
SLLKDLYYQDDRRMDGANVFIRESLQQPGARTAADKLALAAKLLSDCKDATLELHALKDTTLLLRKQEALDRDLT
DSFTGLSVNETMYKLLRLGYKAQAKRIQSDFKVPDKVAWWIRLRALVAKREWSEIEDIAKTKKSPIGWEPFFNLT
LQAGNPRLAAVFVGKCTGLQPGETITMYEKCGMRTKAAEEAVRLRDGEAWQRLLEAVGRGSVEGREIERLGQAVF
KK*
Coding >OphauB2|5759
ATGGACACGCTGCATGCGAGAGCCGACTGGGAGAGCGTGGGGGACAAGTGGTTCCGCAAGACGCAGCAGTACACA
GCCGTCTTTGACCAGGACCTCGATCTCGACAACTTCATTATTGCTGGAGCACTCTATGCGGGAGCCTTGGCTTTC
TGGAGAGATGAGACCAAGTTGCAAGCCCATCAGCCAGGAAAGTCGACAAAGCCTGCAATCGACATTTACAGTCTT
GCTGGGAAGAAGCTGCGCAGCATCCCGTGGGAAAAGGGCCTCATTAAAGGGCTCGGCTGGTCCGAAGACGAGTCG
CTCCTCGTTGTGACTGCCGATGGCGATGTGCGTTGCTATGACCTTCAAGGCGACTTTAGCAACTTTTCGCTGGGA
AACGGCGCCGATGTCTATGGCGTTGTCTCTTGTCGCTTCTACAATCATGGCATGGTGGCTCTCTTGGGCAACAAG
TCTTTTGTCACAGTCTCATCCTACCTCGAACCACGACCAAAGCTTCTTGCCAGTGCGCCCGAGGGAGAAATTCAT
TCGTGGACCATTGTCCCCCCTCACCATACGCTCTCTCGTTCAGTGGAAATTCTTCTTAGCATCAGAAGTACAATT
TATATTCTTGATGCCACTGACTGTGAAGATCGACTTCTCGACATTGGGCCCTTTAGCCACATTAGCGTTTCTCCT
GATGGGCGACATGTCACTTTGTTTGGCAGCAACGGCAAAGCCCATGTCATCTCGAGCGACTTTCAAGACAAGCTC
TTTGAGCATGACTCAAACTCACAGACACCACCTCGCTATGTAGAATGGTGCGGCGACGATGCCCTCATTGCCTGG
GAAGACGAGGTGCACATTATTGGCCCAGGCGACCAGTCGACGTCGTTTATCTACGACAGCACACGTGTTCATGTT
ATTTCCGAGTATGACGGTGCTCGGCTCATCACCAATGATTTTTGCGAATTCTTGGAAAGAATACCCGATTACACC
ATGGAGGTGTTTGGGCATGCGTCAGAGTCGTCCCCGGCCTCAATCCTACTCGACGCCGTTGGTCAGCTAGAAATG
GAGTCGCCCAAGGCTGACGATTACATTCAACTGATACGTCCAAATCTAACCGAGGCTGTCGACACTTGTGTCAAC
GCAGCTGGCCGCGAGTTTGACATCAAGTGGCAAAAGAGACTGCTGAGAGCAGCCTCGTTTGGCAAGTCGGTACTT
GACATTTACAACAGCGATGAGTTTGTCGACATGTGCGAGACACTTCGGGTGCTCAATGCCGTGCGCGACTACGAG
ATTGGGCTCCCTTTATCCTTTGAGCAGTACCATCGACTGACACCAGAGAGACTCATACAGCGACTACTCAGCCGC
AACGAACACCTCTTGGCTCTCAAGATTGCAGATTACCTCAAGCTGCCGACTGGCGGCATTTACCAAGATTGGGCG
TCGACCAAGGTCCGGGTGGGTGCGGAAGACGACGACACGATATGTCGGCTGGTGGTGGAGAGACTATCGGAGAAA
CCTGGCATCTCATTTGAAGAGATTGCGCGGGCGGCATACCACGAGGGGAGAGCTCGGCTGGCAACAGAGCTGCTT
AATCACGAGCCGCGCGGCGGCAGACAGGTACCTCTGCTTCTGGACATGGAGAAGGACGATTTGGCGTTGGACAAG
GCAATTGAAAGCGGGGACACAGATCTCATGTTATCTGTACTGATGCAACTGCGAAAAAAGTTGCCGTTGGCCGCC
TTTTTCCGAGTCATCAACTCTCGGCCCACGGCAACAGCCATGGTGGAGGCCTCGGCTGTGCGGGAGGGTGACAAC
TCGTTGCTCAAAGACCTCTACTACCAAGACGACCGACGCATGGATGGGGCCAATGTGTTTATCCGGGAATCGTTG
CAGCAGCCCGGTGCGCGTACAGCGGCTGACAAGCTCGCATTGGCGGCCAAATTACTCTCAGATTGCAAAGATGCA
ACGCTGGAGCTGCATGCGCTCAAGGATACTACATTACTGTTACGCAAACAAGAGGCACTGGATCGAGACTTGACC
GACTCGTTTACCGGCCTCAGCGTTAATGAGACGATGTATAAGCTGCTACGATTGGGGTACAAGGCGCAGGCAAAG
CGGATTCAAAGCGACTTCAAAGTGCCGGACAAGGTTGCGTGGTGGATCCGGCTACGGGCTCTAGTAGCCAAGCGC
GAATGGAGTGAAATCGAAGACATTGCAAAGACGAAGAAGAGCCCAATCGGATGGGAGCCATTCTTCAACCTCACG
TTGCAAGCAGGCAACCCACGATTGGCGGCCGTCTTTGTGGGCAAGTGCACGGGCTTGCAGCCGGGTGAGACGATT
ACAATGTACGAAAAGTGTGGAATGCGGACAAAGGCGGCGGAGGAAGCAGTCCGGCTGCGTGACGGCGAGGCATGG
CAGCGGCTGCTCGAGGCAGTAGGACGGGGCTCGGTCGAGGGCAGAGAGATTGAGAGGCTTGGCCAAGCAGTGTTT
AAGAAGTGA
Transcript >OphauB2|5759
ATGGACACGCTGCATGCGAGAGCCGACTGGGAGAGCGTGGGGGACAAGTGGTTCCGCAAGACGCAGCAGTACACA
GCCGTCTTTGACCAGGACCTCGATCTCGACAACTTCATTATTGCTGGAGCACTCTATGCGGGAGCCTTGGCTTTC
TGGAGAGATGAGACCAAGTTGCAAGCCCATCAGCCAGGAAAGTCGACAAAGCCTGCAATCGACATTTACAGTCTT
GCTGGGAAGAAGCTGCGCAGCATCCCGTGGGAAAAGGGCCTCATTAAAGGGCTCGGCTGGTCCGAAGACGAGTCG
CTCCTCGTTGTGACTGCCGATGGCGATGTGCGTTGCTATGACCTTCAAGGCGACTTTAGCAACTTTTCGCTGGGA
AACGGCGCCGATGTCTATGGCGTTGTCTCTTGTCGCTTCTACAATCATGGCATGGTGGCTCTCTTGGGCAACAAG
TCTTTTGTCACAGTCTCATCCTACCTCGAACCACGACCAAAGCTTCTTGCCAGTGCGCCCGAGGGAGAAATTCAT
TCGTGGACCATTGTCCCCCCTCACCATACGCTCTCTCGTTCAGTGGAAATTCTTCTTAGCATCAGAAGTACAATT
TATATTCTTGATGCCACTGACTGTGAAGATCGACTTCTCGACATTGGGCCCTTTAGCCACATTAGCGTTTCTCCT
GATGGGCGACATGTCACTTTGTTTGGCAGCAACGGCAAAGCCCATGTCATCTCGAGCGACTTTCAAGACAAGCTC
TTTGAGCATGACTCAAACTCACAGACACCACCTCGCTATGTAGAATGGTGCGGCGACGATGCCCTCATTGCCTGG
GAAGACGAGGTGCACATTATTGGCCCAGGCGACCAGTCGACGTCGTTTATCTACGACAGCACACGTGTTCATGTT
ATTTCCGAGTATGACGGTGCTCGGCTCATCACCAATGATTTTTGCGAATTCTTGGAAAGAATACCCGATTACACC
ATGGAGGTGTTTGGGCATGCGTCAGAGTCGTCCCCGGCCTCAATCCTACTCGACGCCGTTGGTCAGCTAGAAATG
GAGTCGCCCAAGGCTGACGATTACATTCAACTGATACGTCCAAATCTAACCGAGGCTGTCGACACTTGTGTCAAC
GCAGCTGGCCGCGAGTTTGACATCAAGTGGCAAAAGAGACTGCTGAGAGCAGCCTCGTTTGGCAAGTCGGTACTT
GACATTTACAACAGCGATGAGTTTGTCGACATGTGCGAGACACTTCGGGTGCTCAATGCCGTGCGCGACTACGAG
ATTGGGCTCCCTTTATCCTTTGAGCAGTACCATCGACTGACACCAGAGAGACTCATACAGCGACTACTCAGCCGC
AACGAACACCTCTTGGCTCTCAAGATTGCAGATTACCTCAAGCTGCCGACTGGCGGCATTTACCAAGATTGGGCG
TCGACCAAGGTCCGGGTGGGTGCGGAAGACGACGACACGATATGTCGGCTGGTGGTGGAGAGACTATCGGAGAAA
CCTGGCATCTCATTTGAAGAGATTGCGCGGGCGGCATACCACGAGGGGAGAGCTCGGCTGGCAACAGAGCTGCTT
AATCACGAGCCGCGCGGCGGCAGACAGGTACCTCTGCTTCTGGACATGGAGAAGGACGATTTGGCGTTGGACAAG
GCAATTGAAAGCGGGGACACAGATCTCATGTTATCTGTACTGATGCAACTGCGAAAAAAGTTGCCGTTGGCCGCC
TTTTTCCGAGTCATCAACTCTCGGCCCACGGCAACAGCCATGGTGGAGGCCTCGGCTGTGCGGGAGGGTGACAAC
TCGTTGCTCAAAGACCTCTACTACCAAGACGACCGACGCATGGATGGGGCCAATGTGTTTATCCGGGAATCGTTG
CAGCAGCCCGGTGCGCGTACAGCGGCTGACAAGCTCGCATTGGCGGCCAAATTACTCTCAGATTGCAAAGATGCA
ACGCTGGAGCTGCATGCGCTCAAGGATACTACATTACTGTTACGCAAACAAGAGGCACTGGATCGAGACTTGACC
GACTCGTTTACCGGCCTCAGCGTTAATGAGACGATGTATAAGCTGCTACGATTGGGGTACAAGGCGCAGGCAAAG
CGGATTCAAAGCGACTTCAAAGTGCCGGACAAGGTTGCGTGGTGGATCCGGCTACGGGCTCTAGTAGCCAAGCGC
GAATGGAGTGAAATCGAAGACATTGCAAAGACGAAGAAGAGCCCAATCGGATGGGAGCCATTCTTCAACCTCACG
TTGCAAGCAGGCAACCCACGATTGGCGGCCGTCTTTGTGGGCAAGTGCACGGGCTTGCAGCCGGGTGAGACGATT
ACAATGTACGAAAAGTGTGGAATGCGGACAAAGGCGGCGGAGGAAGCAGTCCGGCTGCGTGACGGCGAGGCATGG
CAGCGGCTGCTCGAGGCAGTAGGACGGGGCTCGGTCGAGGGCAGAGAGATTGAGAGGCTTGGCCAAGCAGTGTTT
AAGAAGTGA
Gene >OphauB2|5759
ATGGACACGCTGCATGCGAGAGCCGACTGGGAGAGCGTGGGGGACAAGTGGTTCCGCAAGACGCAGCAGTACACA
GCCGTCTTTGACCAGGACCTCGATCTCGACAACTTCATTATTGCTGGAGCACTCTATGCGGGAGCCTTGGGTATG
CTTAATCTAGCCATTTGCAAATGAGACATGCAACACGATTAGCCTGAAGAAAAGTTCCCCCACAGCCCTCCCTTT
TGGAAGCTGGGAGGAAATGTATTTATAGACGGATGCCTTGCTTAAGAATGGGCCAAAGCTAATGGTTGATAGCTT
TCTGGAGAGATGAGACCAAGTTGCAAGCCCATCAGCCAGGAAAGTCGACAAAGCCTGCAATCGACATTTACAGTC
TTGCTGGGAAGAAGCTGCGCAGCATCCCGTGGGAAAAGGGCCTCATTAAAGGGCTCGGCTGGTCCGAAGACGAGT
CGCTCCTCGTTGTGACTGCCGATGGCGATGTGCGTTGCTATGACCTTCAAGGCGACTTTAGCAACTTTTCGCTGG
GAAACGGCGCCGATGTCTATGGCGTTGTCTCTTGTCGGTATGATATTCTTTAGACAGCCGCATAAACTATTGATA
TGGTAGAATATATTGACGCATCGCAGCTTCTACAATCATGGCATGGTGGCTCTCTTGGGCAACAAGTCTTTTGTC
ACAGTCTCATCCTACCTCGAACCACGACCAAAGCTTCTTGCCAGTGCGCCCGAGGGAGAAATTCATTCGTGGACC
ATTGTCCCCCCTCACCATACGCTCTCTCGTTCAGTGGAAATTCTTCTTAGCATCAGAAGTACAATTTATATTCTT
GATGCCACTGACTGTGAAGATCGACTTCTCGACATTGGGCCCTTTAGCCACATTAGCGTTTCTCCTGATGGGCGA
CATGTCACTTTGTTTGGCAGCAACGGCAAAGCCCATGTCATCTCGAGCGACTTTCAAGACAAGCTCTTTGAGCAT
GACTCAAACTCACAGACACCACCTCGCTATGTAGAATGGTGCGGCGACGATGCCCTCATTGCCTGGGAAGACGAG
GTGCACATTATTGGCCCAGGCGACCAGTCGACGTCGTTTATCTACGACAGCACACGTGTTCATGTTATTTCCGGT
ACTTGAAGTTTGCCACGGCATTGTTACAAGTGAGCTGATTTGCTAATGCTGCACAGAGTATGACGGTGCTCGGCT
CATCACCAATGATTTTTGCGAATTCTTGGAAAGAATACCCGATTACACCATGGAGGTGTTTGGGCATGCGTCAGA
GTCGTCCCCGGCCTCAATCCTACTCGACGCCGTTGGTCAGCTAGAAATGGAGTCGCCCAAGGCTGACGATTACAT
TCAACTGATACGTCCAAATCTAACCGAGGCTGTCGACACTTGTGTCAACGCAGCTGGCCGCGAGTTTGACATCAA
GTGGCAAAAGAGACTGCTGAGAGCAGCCTCGTTTGGCAAGTCGGTACTTGACATTTACAACAGCGATGAGTTTGT
CGACATGTGCGAGACACTTCGGGTGCTCAATGCCGTGCGCGACTACGAGATTGGGCTCCCTTTATCCTTTGAGCA
GTACCATCGACTGACACCAGAGAGACTCATACAGCGACTACTCAGCCGCAACGAACACCTCTTGGCTCTCAAGAT
TGCAGATTACCTCAAGCTGCCGACTGGCGGCATTTACCAAGATTGGGCGTCGACCAAGGTCCGGGTGGGTGCGGA
AGACGACGACACGATATGTCGGCTGGTGGTGGAGAGACTATCGGAGAAACCTGGCATCTCATTTGAAGAGATTGC
GCGGGCGGCATACCACGAGGGGAGAGCTCGGCTGGCAACAGAGCTGCTTAATCACGAGCCGCGCGGCGGCAGACA
GGTACCTCTGCTTCTGGACATGGAGAAGGACGATTTGGCGTTGGACAAGGCAATTGAAAGCGGGGACACAGATCT
CATGTTATCTGTACTGATGCAACTGCGAAAAAAGTTGCCGTTGGCCGCCTTTTTCCGAGTCATCAACTCTCGGCC
CACGGCAACAGCCATGGTGGAGGCCTCGGCTGTGCGGGAGGGTGACAACTCGTTGCTCAAAGACCTCTACTACCA
AGACGACCGACGCATGGATGGGGCCAATGTGTTTATCCGGGAATCGTTGCAGCAGCCCGGTGCGCGTACAGCGGC
TGACAAGCTCGCATTGGCGGCCAAATTACTCTCAGATTGCAAAGATGCAACGCTGGAGCTGCATGCGCTCAAGGA
TACTACATTACTGTTACGCAAACAAGAGGCACTGGATCGAGACTTGACCGACTCGTTTACCGGCCTCAGCGTTAA
TGAGACGATGTATAAGCTGCTACGATTGGGGTACAAGGCGCAGGCAAAGCGGATTCAAAGCGACTTCAAAGTGCC
GGACAAGGTTGCGTGGTGGATCCGGTGAGTTGCTGTGGTGAAGAGGCAGAACAACAAGGGCTTGGTGGACTGATG
CGGGGTGTGACAGGCTACGGGCTCTAGTAGCCAAGCGCGAATGGAGTGAAATCGAAGACATTGCAAAGACGAAGA
AGAGCCCAATCGGATGGGAGGTGAGTTGGGGCGACGCTAGCAGGGCGGGTAAGAAATGCAAGCTGACTCCGTCGG
TGACTAGCCATTCTTCAACCTCACGTTGCAAGCAGGCAACCCACGATTGGCGGCCGTCTTTGTGGGCAAGTGCAC
GGGCTTGCAGCCGGGTGAGACGATTACAATGTACGAAAAGTGTGGAATGCGGACAAAGGCGGCGGAGGAAGCAGT
CCGGCTGCGTGACGGCGAGGCATGGCAGCGGCTGCTCGAGGCAGTAGGACGGGGCTCGGTCGAGGGCAGAGAGAT
TGAGAGGCTTGGCCAAGCAGTGTTTAAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail