© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|5758 |
| Gene name | |
| Location | Contig_479:1527..1875 |
| Strand | - |
| Gene length (bp) | 348 |
| Transcript length (bp) | 228 |
| Coding sequence length (bp) | 228 |
| Protein length (aa) | 76 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05493 | ATP_synt_H | ATP synthase subunit H | 2.4E-24 | 6 | 66 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q75EU0|VA0E_ASHGO | V-type proton ATPase subunit e OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VMA9 PE=3 SV=1 | 5 | 74 | 4.0E-19 |
| sp|Q3E7B6|VA0E_YEAST | V-type proton ATPase subunit e OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA9 PE=1 SV=1 | 1 | 74 | 4.0E-19 |
| sp|Q69Z14|VA0E_SCHPO | V-type proton ATPase subunit e OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma9 PE=3 SV=2 | 14 | 65 | 6.0E-13 |
| sp|Q5K8S8|VA0E_CRYNJ | V-type proton ATPase subunit e OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VMA9 PE=3 SV=2 | 20 | 72 | 1.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0033179 | proton-transporting V-type ATPase, V0 domain | Yes |
| GO:1902600 | proton transmembrane transport | Yes |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | Yes |
| GO:0008150 | biological_process | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0042625 | ATPase-coupled ion transmembrane transporter activity | No |
| GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | No |
| GO:0006812 | cation transport | No |
| GO:0005575 | cellular_component | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0022853 | active ion transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0015399 | primary active transmembrane transporter activity | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0098796 | membrane protein complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0140657 | ATP-dependent activity | No |
| GO:0019829 | ATPase-coupled cation transmembrane transporter activity | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | No |
| GO:0055085 | transmembrane transport | No |
| GO:0005215 | transporter activity | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | No |
| GO:0015078 | proton transmembrane transporter activity | No |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| 2 | 33 | 55 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 6847 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5758 MAKGYSIFVGLVVVGILCLASWFLAPKGENRVLWRSSLILSIVSCFLMWAITFLAQLHPLIVPRRSDLRESFLET * |
| Coding | >OphauB2|5758 ATGGCTAAAGGATACTCTATTTTCGTCGGCCTCGTCGTCGTCGGCATCCTATGCTTGGCTTCTTGGTTTCTAGCA CCAAAGGGGGAGAATCGAGTACTTTGGCGATCGTCTCTGATTCTCTCGATCGTCAGTTGCTTTCTCATGTGGGCC ATCACTTTCCTCGCGCAGCTCCATCCCTTAATCGTACCGAGACGAAGCGACCTGCGCGAGAGCTTCCTGGAGACA TGA |
| Transcript | >OphauB2|5758 ATGGCTAAAGGATACTCTATTTTCGTCGGCCTCGTCGTCGTCGGCATCCTATGCTTGGCTTCTTGGTTTCTAGCA CCAAAGGGGGAGAATCGAGTACTTTGGCGATCGTCTCTGATTCTCTCGATCGTCAGTTGCTTTCTCATGTGGGCC ATCACTTTCCTCGCGCAGCTCCATCCCTTAATCGTACCGAGACGAAGCGACCTGCGCGAGAGCTTCCTGGAGACA TGA |
| Gene | >OphauB2|5758 ATGGCTAAAGGGTAAGTCGCTATAATTGCACTAAATTGCAATCGGAATTAATCATTCTCACATATCTGAAGATAC TCTATTTTCGTCGGCCTCGTCGTCGTCGGCATCCTATGCTTGGCTTCTTGGTTTCTAGCACCAAAGGGGGAGAAT CGAGTGTACGTCAGGCTTCTTTATTTGCTGAGATGTGCCTCGTTGACTTCGAATTAACTTTACAGACTTTGGCGA TCGTCTCTGATTCTCTCGATCGTCAGTTGCTTTCTCATGTGGGCCATCACTTTCCTCGCGCAGCTCCATCCCTTA ATCGTACCGAGACGAAGCGACCTGCGCGAGAGCTTCCTGGAGACATGA |