Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5757
Gene name
LocationContig_479:128..1148
Strand+
Gene length (bp)1020
Transcript length (bp)864
Coding sequence length (bp)864
Protein length (aa) 288

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04161 Arv1 Arv1-like family 9.5E-71 3 217

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9HDX5|ARV1_SCHPO Protein arv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arv1 PE=3 SV=3 4 256 1.0E-41
sp|Q54GD9|ARV1_DICDI Protein arv1 homolog OS=Dictyostelium discoideum GN=arv1 PE=3 SV=1 3 250 5.0E-28
sp|Q5ANH2|ARV1_CANAL Protein ARV1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ARV1 PE=3 SV=1 3 225 1.0E-24
sp|Q750Q7|ARV1_ASHGO Protein ARV1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ARV1 PE=3 SV=1 3 235 3.0E-21
sp|Q9H2C2|ARV1_HUMAN Protein ARV1 OS=Homo sapiens GN=ARV1 PE=2 SV=1 4 222 7.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|Q9HDX5|ARV1_SCHPO Protein arv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arv1 PE=3 SV=3 4 256 1.0E-41
sp|Q54GD9|ARV1_DICDI Protein arv1 homolog OS=Dictyostelium discoideum GN=arv1 PE=3 SV=1 3 250 5.0E-28
sp|Q5ANH2|ARV1_CANAL Protein ARV1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ARV1 PE=3 SV=1 3 225 1.0E-24
sp|Q750Q7|ARV1_ASHGO Protein ARV1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ARV1 PE=3 SV=1 3 235 3.0E-21
sp|Q9H2C2|ARV1_HUMAN Protein ARV1 OS=Homo sapiens GN=ARV1 PE=2 SV=1 4 222 7.0E-16
sp|Q3SZW3|ARV1_BOVIN Protein ARV1 OS=Bos taurus GN=ARV1 PE=2 SV=1 4 235 3.0E-15
sp|Q9D0U9|ARV1_MOUSE Protein ARV1 OS=Mus musculus GN=Arv1 PE=2 SV=1 4 222 3.0E-14
sp|Q06541|ARV1_YEAST Protein ARV1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARV1 PE=1 SV=1 3 249 1.0E-13
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GO

GO Term Description Terminal node
GO:0032366 intracellular sterol transport Yes
GO:0046907 intracellular transport No
GO:0032365 intracellular lipid transport No
GO:0015918 sterol transport No
GO:0009987 cellular process No
GO:0051179 localization No
GO:0071702 organic substance transport No
GO:0008150 biological_process No
GO:0015850 organic hydroxy compound transport No
GO:0051649 establishment of localization in cell No
GO:0051234 establishment of localization No
GO:0006869 lipid transport No
GO:0006810 transport No
GO:0051641 cellular localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 82 101 19
2 126 148 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5757
MPICIECRHPVKTLWTQYSGAGDKSSGHNIRLTVCRRCGRFCDKYVEHDFVVLFIDLVLIKPQVYRHLLHNTLMR
DGDGLDPFIVRLGVLLLLFDVYLTWARIEKQTSPVAAPGESNLGSLARQPIVLQYLFFLMLCTLSTLAFHISIRF
LTSSPRSPLQSWGVMNRHKRPNSVSTALLVSSSTKLFPILMVIWEYDVPAAARSLGWAVVANNIEALRILLDCRY
YTACFLALAGAASRWAVGRLVLMAVGLGHVDSIGDSSVAADGKALWALLMYARQWAGRLAVG*
Coding >OphauB2|5757
ATGCCTATCTGTATTGAATGTCGGCACCCGGTTAAGACGCTCTGGACGCAATATTCAGGCGCTGGCGATAAGTCG
AGTGGACATAATATACGTTTGACAGTATGCCGTCGGTGTGGTCGCTTCTGCGACAAGTATGTCGAGCATGACTTT
GTCGTGCTCTTTATCGACCTTGTCCTTATCAAGCCTCAGGTCTATCGTCACCTATTGCATAACACGTTGATGCGC
GATGGCGATGGTCTTGATCCCTTTATCGTTCGGCTAGGCGTGCTTCTGCTGCTCTTTGACGTCTACCTTACATGG
GCACGGATTGAGAAGCAGACAAGTCCCGTTGCCGCGCCGGGAGAGAGCAATCTGGGCAGTCTAGCACGCCAGCCT
ATTGTGCTGCAATATCTGTTCTTCTTAATGCTATGCACCCTGTCAACACTAGCTTTCCATATCAGCATCCGTTTC
CTCACGTCTTCGCCCCGCTCGCCTCTCCAATCATGGGGCGTCATGAATAGGCACAAGCGACCAAACTCAGTCTCG
ACTGCCCTGCTCGTATCTTCGTCGACAAAGCTGTTCCCCATCTTGATGGTGATTTGGGAATACGACGTCCCTGCC
GCCGCGCGCTCTCTGGGATGGGCCGTCGTGGCCAACAATATTGAGGCTTTGCGCATTCTCCTCGACTGCCGATAT
TACACAGCTTGTTTTTTGGCCCTGGCTGGCGCGGCCTCGAGGTGGGCTGTTGGACGATTAGTGCTAATGGCGGTC
GGTTTGGGACACGTTGATTCCATTGGTGATAGTAGTGTGGCAGCTGACGGTAAGGCGCTCTGGGCCCTATTGATG
TATGCCAGACAGTGGGCTGGTAGATTGGCTGTGGGATAA
Transcript >OphauB2|5757
ATGCCTATCTGTATTGAATGTCGGCACCCGGTTAAGACGCTCTGGACGCAATATTCAGGCGCTGGCGATAAGTCG
AGTGGACATAATATACGTTTGACAGTATGCCGTCGGTGTGGTCGCTTCTGCGACAAGTATGTCGAGCATGACTTT
GTCGTGCTCTTTATCGACCTTGTCCTTATCAAGCCTCAGGTCTATCGTCACCTATTGCATAACACGTTGATGCGC
GATGGCGATGGTCTTGATCCCTTTATCGTTCGGCTAGGCGTGCTTCTGCTGCTCTTTGACGTCTACCTTACATGG
GCACGGATTGAGAAGCAGACAAGTCCCGTTGCCGCGCCGGGAGAGAGCAATCTGGGCAGTCTAGCACGCCAGCCT
ATTGTGCTGCAATATCTGTTCTTCTTAATGCTATGCACCCTGTCAACACTAGCTTTCCATATCAGCATCCGTTTC
CTCACGTCTTCGCCCCGCTCGCCTCTCCAATCATGGGGCGTCATGAATAGGCACAAGCGACCAAACTCAGTCTCG
ACTGCCCTGCTCGTATCTTCGTCGACAAAGCTGTTCCCCATCTTGATGGTGATTTGGGAATACGACGTCCCTGCC
GCCGCGCGCTCTCTGGGATGGGCCGTCGTGGCCAACAATATTGAGGCTTTGCGCATTCTCCTCGACTGCCGATAT
TACACAGCTTGTTTTTTGGCCCTGGCTGGCGCGGCCTCGAGGTGGGCTGTTGGACGATTAGTGCTAATGGCGGTC
GGTTTGGGACACGTTGATTCCATTGGTGATAGTAGTGTGGCAGCTGACGGTAAGGCGCTCTGGGCCCTATTGATG
TATGCCAGACAGTGGGCTGGTAGATTGGCTGTGGGATAA
Gene >OphauB2|5757
ATGCCTATCTGTATTGAATGTCGGCACCCGGTTAAGACGCTCTGGACGCAATATTCAGGCGCTGGCGATAAGTCG
AGTGGACATAATATACGTTTGACAGTATGCCGTCGGTGTGGTCGCTTCTGCGACAAGTATGTCGAGCATGACTTT
GTCGTGCTCTTTATCGACCTTGTCCTTATCAAGCCTCAGGTATGTCGAGTCGAAAGGGTATGATGCGTGCTAATT
CCAAGCGCAGGTCTATCGTCACCTATTGCATAACACGTTGATGCGCGATGGCGATGGTCTTGATGTGGGTATTAG
TACTAGATCACAGCCTTCACGCTTCTCACAGTTGATGCTTTCCAGCCCTTTATCGTTCGGCTAGGCGTGCTTCTG
CTGCTCTTTGACGTCTACCTTACATGGGCACGGATTGAGAAGCAGACAAGTCCCGTTGCCGCGCCGGGAGAGAGC
AATCTGGGCAGTCTAGCACGCCAGCCTATTGTGCTGCAATATCTGTTCTTCTGCAAGTCCAATCTGCTTCGACAG
CCGCTGCTTTCTCTCACTGACTAGCATATAGTAATGCTATGCACCCTGTCAACACTAGCTTTCCATATCAGCATC
CGTTTCCTCACGTCTTCGCCCCGCTCGCCTCTCCAATCATGGGGCGTCATGAATAGGCACAAGCGACCAAACTCA
GTCTCGACTGCCCTGCTCGTATCTTCGTCGACAAAGCTGTTCCCCATCTTGATGGTGATTTGGGAATACGACGTC
CCTGCCGCCGCGCGCTCTCTGGGATGGGCCGTCGTGGCCAACAATATTGAGGCTTTGCGCATTCTCCTCGACTGC
CGATATTACACAGCTTGTTTTTTGGCCCTGGCTGGCGCGGCCTCGAGGTGGGCTGTTGGACGATTAGTGCTAATG
GCGGTCGGTTTGGGACACGTTGATTCCATTGGTGATAGTAGTGTGGCAGCTGACGGTAAGGCGCTCTGGGCCCTA
TTGATGTATGCCAGACAGTGGGCTGGTAGATTGGCTGTGGGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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