© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5742 |
| Gene name | |
| Location | Contig_47:106386..109002 |
| Strand | + |
| Gene length (bp) | 2616 |
| Transcript length (bp) | 2253 |
| Coding sequence length (bp) | 2253 |
| Protein length (aa) | 751 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 4.8E-136 | 104 | 618 |
| PF03169 | OPT | OPT oligopeptide transporter protein | 1.9E-10 | 624 | 704 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 17 | 750 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 83 | 728 | 3.0E-148 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 83 | 730 | 3.0E-132 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 62 | 719 | 8.0E-129 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 63 | 719 | 6.0E-128 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 17 | 750 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 83 | 728 | 3.0E-148 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 83 | 730 | 3.0E-132 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 62 | 719 | 8.0E-129 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 63 | 719 | 6.0E-128 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 69 | 733 | 6.0E-124 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 69 | 733 | 3.0E-123 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 74 | 745 | 3.0E-123 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 85 | 733 | 5.0E-123 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 71 | 745 | 4.0E-119 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 45 | 750 | 6.0E-119 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 88 | 745 | 2.0E-113 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 45 | 722 | 3.0E-90 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 28 | 733 | 5.0E-84 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| 2 | 142 | 164 | 22 |
| 3 | 179 | 201 | 22 |
| 4 | 210 | 232 | 22 |
| 5 | 236 | 258 | 22 |
| 6 | 279 | 301 | 22 |
| 7 | 321 | 343 | 22 |
| 8 | 352 | 374 | 22 |
| 9 | 426 | 448 | 22 |
| 10 | 480 | 502 | 22 |
| 11 | 507 | 529 | 22 |
| 12 | 536 | 558 | 22 |
| 13 | 589 | 611 | 22 |
| 14 | 634 | 651 | 17 |
| 15 | 656 | 673 | 17 |
| 16 | 686 | 708 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5742 MGLKVLVGVKAREMGASDSADSTALDLPAASANHSTERELRRFRRQHKWDPFLDADKLQSVDAAIASGDAEKEAV VDDALIHQDSPYSEVRSSVPPYDIEVPVNTIRAWVIGGLLCTIIAGCNVLLNLRRTPITITSTVVQLVAYPLGLG WAKYMPASAFTLFGHTFELNPGPFNIKEHTIITMMTAAGSSISYAIDILLAQEIFYKQEFRWGFQILLMISTQAM GFGIAGIARRFLIWPSAMVWPAVLITCSVMYSLHDHQASDPSKTNGWKIGRYSFFIIVALATFSWEWMPLVIAPF LSLFMFPTWIAPKNVLVNQIFGGQTGLGLLPISFDWSVVSAFLNSPLQTPSFAILNVCAGMLLILVGAVGLAWAG PDYYRYLPLSANQNFDRFAQPYNTSRILTPDFTINNTAYQEYSPIILGPTFALSYGLSFATLMSTIAHVVLFYGS DVWNRARNAHYDEPDIHFKLMRKYKEAPQWWFLSVFIVSFACGMIASQVWSTHLTWWAFSLCILIGVVLFIPIGI VQAITNQQTGLNVITEMIVGYLMPGRPVAMMLFKSWGYMLTFNGLQYISDMKVGHYMKIPPRSMFAAQAFAVIWL SFVQISTYNFLRGNIEGILIGPARFLVARRYPRSWARYIISPAMFGAASMVPPATLFYLFQWAVVGLTFNFFIHR RYYGWWSRYNYPLSGALDIGTALCTVVSGIGLGLSETKMPDWWGTTVMGNTLDANGTAVTKAFIKGQTPLGPSSW * |
| Coding | >OphauB2|5742 ATGGGCCTCAAAGTCCTCGTTGGCGTCAAGGCCCGCGAGATGGGCGCCTCTGACAGCGCCGACTCAACAGCCCTT GATCTGCCCGCTGCCTCTGCCAACCACAGCACGGAGCGCGAGCTGCGTCGCTTTCGCCGCCAGCACAAGTGGGAT CCTTTTCTCGACGCCGACAAGCTGCAAAGCGTAGATGCTGCCATTGCTTCTGGCGACGCCGAGAAAGAGGCCGTG GTTGATGATGCCCTCATCCACCAAGACTCTCCCTATTCAGAGGTCCGCTCTTCAGTGCCCCCCTATGATATCGAG GTCCCTGTCAACACAATCCGCGCCTGGGTCATTGGCGGCTTACTCTGCACCATCATTGCCGGCTGCAACGTCTTG CTCAATCTCCGCCGCACTCCCATCACCATTACATCCACGGTCGTTCAGCTCGTTGCATATCCACTGGGACTTGGT TGGGCCAAGTATATGCCAGCCTCAGCCTTCACTCTATTTGGCCACACTTTTGAGTTGAATCCCGGGCCATTCAAC ATCAAGGAACACACCATCATCACCATGATGACTGCTGCCGGCTCTTCCATCAGCTACGCCATTGACATCCTTTTG GCCCAGGAAATCTTTTATAAACAAGAGTTTCGATGGGGCTTTCAGATACTACTCATGATTTCTACGCAGGCCATG GGTTTTGGTATTGCCGGCATTGCTCGTCGTTTTCTCATATGGCCTTCGGCCATGGTTTGGCCGGCTGTTCTCATT ACCTGCTCTGTCATGTACTCGCTGCATGATCATCAAGCCTCGGACCCTTCAAAGACTAATGGCTGGAAAATTGGC CGCTATAGCTTCTTCATCATCGTCGCCTTGGCAACCTTTTCCTGGGAATGGATGCCTCTGGTTATTGCGCCCTTT CTCTCTCTCTTTATGTTTCCTACCTGGATTGCGCCAAAAAATGTCCTTGTTAATCAAATCTTCGGTGGCCAAACC GGACTTGGCTTGCTTCCCATCTCGTTCGACTGGTCTGTCGTCTCGGCCTTTCTCAACTCTCCACTACAAACCCCT TCTTTCGCCATCCTCAACGTTTGCGCTGGAATGCTCCTTATCCTAGTGGGCGCCGTTGGTCTAGCCTGGGCTGGC CCAGACTACTACCGCTACCTTCCGCTTAGTGCCAATCAGAACTTTGATCGGTTTGCCCAACCCTATAATACCAGC CGAATTCTCACGCCCGACTTTACTATTAACAATACGGCTTATCAAGAGTACTCGCCTATAATACTTGGGCCAACA TTTGCTCTCTCATATGGCTTATCTTTTGCCACCCTCATGTCTACAATTGCCCACGTGGTTCTATTCTATGGTTCC GATGTGTGGAACCGGGCCCGCAACGCCCACTATGACGAGCCTGATATTCACTTCAAGCTTATGCGAAAATACAAG GAAGCGCCTCAGTGGTGGTTTCTCTCGGTATTCATCGTGAGCTTTGCTTGCGGCATGATTGCTTCTCAGGTCTGG AGTACTCACCTTACTTGGTGGGCATTCTCTCTCTGCATACTCATCGGCGTTGTTCTATTCATACCTATTGGTATC GTCCAGGCCATCACAAATCAACAAACCGGACTAAATGTCATTACTGAGATGATTGTGGGATACCTGATGCCAGGC CGCCCTGTCGCCATGATGCTCTTTAAATCTTGGGGCTATATGCTGACATTTAATGGTCTTCAATACATTTCTGAC ATGAAGGTTGGCCATTATATGAAAATCCCTCCGCGCAGCATGTTTGCCGCACAGGCCTTTGCCGTCATTTGGCTT TCATTTGTTCAGATTTCGACCTACAACTTCTTGCGAGGAAACATTGAGGGCATTTTGATTGGCCCTGCCAGGTTC CTGGTTGCTCGCCGCTACCCTCGATCATGGGCGCGATACATCATCTCGCCGGCCATGTTCGGCGCCGCATCCATG GTTCCTCCAGCCACGCTATTTTACCTATTCCAGTGGGCTGTTGTCGGCCTCACCTTCAATTTCTTCATTCATCGG CGCTATTATGGATGGTGGTCTCGTTACAACTATCCGCTGTCTGGCGCGCTCGACATTGGTACGGCTCTTTGCACC GTAGTTTCGGGCATCGGCTTAGGCCTGAGCGAGACTAAAATGCCAGATTGGTGGGGCACTACCGTTATGGGCAAT ACCCTCGATGCAAATGGTACTGCCGTCACAAAAGCATTCATCAAGGGCCAGACGCCACTTGGACCTTCGAGCTGG TAA |
| Transcript | >OphauB2|5742 ATGGGCCTCAAAGTCCTCGTTGGCGTCAAGGCCCGCGAGATGGGCGCCTCTGACAGCGCCGACTCAACAGCCCTT GATCTGCCCGCTGCCTCTGCCAACCACAGCACGGAGCGCGAGCTGCGTCGCTTTCGCCGCCAGCACAAGTGGGAT CCTTTTCTCGACGCCGACAAGCTGCAAAGCGTAGATGCTGCCATTGCTTCTGGCGACGCCGAGAAAGAGGCCGTG GTTGATGATGCCCTCATCCACCAAGACTCTCCCTATTCAGAGGTCCGCTCTTCAGTGCCCCCCTATGATATCGAG GTCCCTGTCAACACAATCCGCGCCTGGGTCATTGGCGGCTTACTCTGCACCATCATTGCCGGCTGCAACGTCTTG CTCAATCTCCGCCGCACTCCCATCACCATTACATCCACGGTCGTTCAGCTCGTTGCATATCCACTGGGACTTGGT TGGGCCAAGTATATGCCAGCCTCAGCCTTCACTCTATTTGGCCACACTTTTGAGTTGAATCCCGGGCCATTCAAC ATCAAGGAACACACCATCATCACCATGATGACTGCTGCCGGCTCTTCCATCAGCTACGCCATTGACATCCTTTTG GCCCAGGAAATCTTTTATAAACAAGAGTTTCGATGGGGCTTTCAGATACTACTCATGATTTCTACGCAGGCCATG GGTTTTGGTATTGCCGGCATTGCTCGTCGTTTTCTCATATGGCCTTCGGCCATGGTTTGGCCGGCTGTTCTCATT ACCTGCTCTGTCATGTACTCGCTGCATGATCATCAAGCCTCGGACCCTTCAAAGACTAATGGCTGGAAAATTGGC CGCTATAGCTTCTTCATCATCGTCGCCTTGGCAACCTTTTCCTGGGAATGGATGCCTCTGGTTATTGCGCCCTTT CTCTCTCTCTTTATGTTTCCTACCTGGATTGCGCCAAAAAATGTCCTTGTTAATCAAATCTTCGGTGGCCAAACC GGACTTGGCTTGCTTCCCATCTCGTTCGACTGGTCTGTCGTCTCGGCCTTTCTCAACTCTCCACTACAAACCCCT TCTTTCGCCATCCTCAACGTTTGCGCTGGAATGCTCCTTATCCTAGTGGGCGCCGTTGGTCTAGCCTGGGCTGGC CCAGACTACTACCGCTACCTTCCGCTTAGTGCCAATCAGAACTTTGATCGGTTTGCCCAACCCTATAATACCAGC CGAATTCTCACGCCCGACTTTACTATTAACAATACGGCTTATCAAGAGTACTCGCCTATAATACTTGGGCCAACA TTTGCTCTCTCATATGGCTTATCTTTTGCCACCCTCATGTCTACAATTGCCCACGTGGTTCTATTCTATGGTTCC GATGTGTGGAACCGGGCCCGCAACGCCCACTATGACGAGCCTGATATTCACTTCAAGCTTATGCGAAAATACAAG GAAGCGCCTCAGTGGTGGTTTCTCTCGGTATTCATCGTGAGCTTTGCTTGCGGCATGATTGCTTCTCAGGTCTGG AGTACTCACCTTACTTGGTGGGCATTCTCTCTCTGCATACTCATCGGCGTTGTTCTATTCATACCTATTGGTATC GTCCAGGCCATCACAAATCAACAAACCGGACTAAATGTCATTACTGAGATGATTGTGGGATACCTGATGCCAGGC CGCCCTGTCGCCATGATGCTCTTTAAATCTTGGGGCTATATGCTGACATTTAATGGTCTTCAATACATTTCTGAC ATGAAGGTTGGCCATTATATGAAAATCCCTCCGCGCAGCATGTTTGCCGCACAGGCCTTTGCCGTCATTTGGCTT TCATTTGTTCAGATTTCGACCTACAACTTCTTGCGAGGAAACATTGAGGGCATTTTGATTGGCCCTGCCAGGTTC CTGGTTGCTCGCCGCTACCCTCGATCATGGGCGCGATACATCATCTCGCCGGCCATGTTCGGCGCCGCATCCATG GTTCCTCCAGCCACGCTATTTTACCTATTCCAGTGGGCTGTTGTCGGCCTCACCTTCAATTTCTTCATTCATCGG CGCTATTATGGATGGTGGTCTCGTTACAACTATCCGCTGTCTGGCGCGCTCGACATTGGTACGGCTCTTTGCACC GTAGTTTCGGGCATCGGCTTAGGCCTGAGCGAGACTAAAATGCCAGATTGGTGGGGCACTACCGTTATGGGCAAT ACCCTCGATGCAAATGGTACTGCCGTCACAAAAGCATTCATCAAGGGCCAGACGCCACTTGGACCTTCGAGCTGG TAA |
| Gene | >OphauB2|5742 ATGGGCCTCAAAGTCCTCGTTGGCGTCAAGGCCCGCGAGATGGGCGCCTCTGACAGCGCCGACTCAACAGCCCTT GATCTGCCCGCTGCCTCTGCCAACCACAGCACGGAGCGCGAGCTGCGTCGCTTTCGCCGCCAGCACAAGTGGGAT CCTTTTCTCGACGCCGACAAGCTGCAAAGCGTAGATGCTGCCATTGCTTCTGGCGACGCCGAGAAAGAGGCCGTG GTTGATGATGCCCTCATCCACCAAGACTCTCCCTATTCAGAGGTCCGCTCTTCAGTAAGTCCTTGCCTCTTGCTC TTGTCTTGTTCATCCTCCCTCGGACTGCCACGGGTAGAGAGGCCTTACGTTTTGCTGCTAGGTGCCCCCCTATGA TATCGAGGTCCCTGTCAACACAATCCGCGCCTGGGTCATTGGCGGCTTACTCTGCACCATCATTGCCGGCTGCAA CGTCTTGCTCAATCTCCGCCGCACTCCCATCACCATTACATCCACGGTCGTTCAGCTCGTTGCATATCCGTAAGT GCTTTATCAATATGAGCCGGGCCCATGTGCAGCATTGGTACTAATTTAGCTCGCCTCCAGACTGGGACTTGGTTG GGCCAAGTATATGCCAGCCTCAGCCTTCACTCTATTTGGCCACACTTTTGAGTTGAATCCCGGGCCATTCAACAT CAAGGAACACACCATCATCACCATGATGACTGCTGCCGGCTCTTCCATCAGCTACGCCATTGACATCCTTTTGGC CCAGGAAATCTTTTATAAACAAGAGTTTCGATGGGGCTTTCAGATACTACTCATGATTTCTACGCAGGCCATGGG TTTTGGTATTGCCGGCATTGCTCGTCGTTTTCTCATATGGCCTTCGGCCATGGTTTGGCCGGCTGTTCTCATTAC CTGCTCTGTCATGTACTCGCTGCATGATCATCAAGCCTCGGACCCTTCAAAGACTAATGGCTGGAAAATTGGCCG CTATAGCTTCTTCATCATCGTCGCCTTGGCAACCTTTTCCTGGGAATGGATGCCTCTGGTTATTGCGCCCTTTCT CTCTCTCTTTATGTTTCCTACCTGGATTGCGCCAAAAAATGTCCTTGTTAATCAAATCTTCGGTGGCCAAACCGG ACTTGGCTTGCTTCCCATCTCGTTCGACTGGTCTGTCGTCTCGGCCTTTCTCAACTCTCCACTACAAACCCCTTC TTTCGCCATCCTCAACGTTTGCGCTGGAATGCTCCTTATCCTAGTGGGCGCCGTTGGTCTAGCCTGGGCTGGCCC AGACTACTACCGCTACCTTCCGCTTAGTGCCAATCAGAACTTTGATCGGTTTGCCCAACCCTATAATACCAGCCG AATTCTCACGCCCGACTTTACTATTAACAATACGGCTTATCAAGAGTACTCGCCTATAATACTTGGGCCAACATT TGCTCTCTCATATGGCTTATCTTTTGCCACCCTCATGTCTACAATTGCCCACGTGGTTCTATTCTATGGTTCCGA TGTGTGGAACCGGGCCCGCAACGCCCACTATGACGAGCCTGATATTCACTTCAAGCTTATGCGAAAATACAAGGA AGCGCCTCAGTGGTGGTTTCTCTCGGTATTCATCGTGAGCTTTGCTTGCGGCATGATTGCTTCTCAGGTCTGGAG TACTCACCTTACTTGGTGGGCATTCTCTCTCTGCATACTCATCGGCGTTGTTCTATTCATACCTATTGGTATCGT CCAGGCCATCACAAATCAACAAACCGGACTAAATGTCATTACTGAGATGATTGTGGGATACCTGATGCCAGGCCG CCCTGTCGCCATGATGCTCTTTAAATCTTGGGGCTATATGCTGACATTTAATGGTCTTCAATACATTTCTGACAT GAAGGTTGGCCATTATATGAAAATCCCTCCGCGCAGCATGTTTGCCGCACAGGCCTTTGCCGTCATTTGGCTTTC ATTTGTTCAGATTTCGACCTACAACTTCTTGCGAGGAAACATTGAGGGCATTTGTACCCCGAATCAGACTCAAGG CTTAACCTGCCCCAACGCCAGAACCTTTTATAATGCCAGTGTCATTTGGGGAGTGATTGGCCCTGCCAGGGTTTT CGGGCGAGGAGCCATGTATTCGTGGGTCAATTGGTTCTGGGCAATTGGATTCGCTGTGCCCTTGATTCAGTTCCT GGTTGCTCGCCGCTACCCTCGATCATGGGCGCGATACATCATCTCGCCGGCCATGTTCGGCGCCGCATCCATGGT TCCTCCAGCCACGCTATTTTACCTATTCCAGTGGGCTGTTGTCGGCCTCACCTTCAATTTCTTCATTCATCGGCG CTATTATGGATGGTGGTGTAAGTTGCTATTCTGAGGTTCATTCAACTGTGCGCCAGCAATATGCTGATTGTTTTT ACTATAGCTCGTTACAACTATCCGCTGTCTGGCGCGCTCGACATTGGTACGGCTCTTTGCACCGTAGTTTCGGGC ATCGGCTTAGGCCTGAGCGAGACTAAAATGCCAGATTGGTGGGGCACTACCGTTATGGGCAATACCCTCGATGCA AATGGTACTGCCGTCACAAAAGCATTCATCAAGGGCCAGACGCCACTTGGACCTTCGAGCTGGTAA |