Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5741
Gene name
LocationContig_47:101678..102510
Strand+
Gene length (bp)832
Transcript length (bp)372
Coding sequence length (bp)372
Protein length (aa) 124

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07960 CBP4 CBP4 1.1E-27 8 115

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7SDU5|CBP4_NEUCR Assembly factor cbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cbp-4 PE=3 SV=1 1 123 8.0E-43
sp|Q2H4Y0|CBP4_CHAGB Assembly factor CBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CBP4 PE=3 SV=2 5 119 4.0E-34
sp|A4RC22|CBP4_MAGO7 Assembly factor CBP4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBP4 PE=3 SV=1 1 119 2.0E-32
sp|A7EJE5|CBP4_SCLS1 Assembly factor cbp4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=cbp4 PE=3 SV=1 3 115 2.0E-31
sp|Q1DHX9|CBP4_COCIM Assembly factor CBP4 OS=Coccidioides immitis (strain RS) GN=CBP4 PE=3 SV=1 12 93 4.0E-31
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Swissprot ID Swissprot Description Start End E-value
sp|Q7SDU5|CBP4_NEUCR Assembly factor cbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cbp-4 PE=3 SV=1 1 123 8.0E-43
sp|Q2H4Y0|CBP4_CHAGB Assembly factor CBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CBP4 PE=3 SV=2 5 119 4.0E-34
sp|A4RC22|CBP4_MAGO7 Assembly factor CBP4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBP4 PE=3 SV=1 1 119 2.0E-32
sp|A7EJE5|CBP4_SCLS1 Assembly factor cbp4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=cbp4 PE=3 SV=1 3 115 2.0E-31
sp|Q1DHX9|CBP4_COCIM Assembly factor CBP4 OS=Coccidioides immitis (strain RS) GN=CBP4 PE=3 SV=1 12 93 4.0E-31
sp|A6SAY2|CBP4_BOTFB Assembly factor cbp4 OS=Botryotinia fuckeliana (strain B05.10) GN=cbp4 PE=3 SV=1 3 117 2.0E-30
sp|A1DLB6|CBP4_NEOFI Assembly factor cbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbp4 PE=3 SV=1 12 116 1.0E-29
sp|A1CMM2|CBP4_ASPCL Assembly factor cbp4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=cbp4 PE=3 SV=1 12 116 3.0E-29
sp|A2R065|CBP4_ASPNC Assembly factor cbp4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbp4 PE=3 SV=2 12 116 1.0E-28
sp|Q2UE23|CBP4_ASPOR Assembly factor cbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cbp4 PE=3 SV=2 12 116 3.0E-28
sp|Q0ULB7|CBP4_PHANO Assembly factor CBP4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=CBP4 PE=3 SV=2 12 112 4.0E-28
sp|Q0CGN5|CBP4_ASPTN Assembly factor cbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbp4 PE=3 SV=1 12 116 9.0E-28
sp|Q5ASG4|CBP4_EMENI Assembly factor cbp4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cbp4 PE=3 SV=1 12 116 5.0E-27
sp|A6R620|CBP4_AJECN Assembly factor CBP4 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=CBP4 PE=3 SV=1 14 116 9.0E-27
sp|Q6FVS6|CBP4_CANGA Assembly factor CBP4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CBP4 PE=3 SV=1 9 115 5.0E-09
sp|Q6C5S0|CBP4_YARLI Assembly factor CBP4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CBP4 PE=3 SV=1 20 83 7.0E-08
sp|A7TFK6|CBP4_VANPO Assembly factor CBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBP4 PE=3 SV=1 9 115 4.0E-07
sp|A3LQD9|CBP4_PICST Assembly factor CBP4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=CBP4 PE=3 SV=1 9 81 2.0E-06
sp|Q75F70|CBP4_ASHGO Assembly factor CBP4 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CBP4 PE=3 SV=2 9 115 5.0E-06
sp|Q59QC6|CBP4_CANAL Assembly factor CBP4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CBP4 PE=3 SV=1 9 81 5.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5741
MAPGKSFNWRLWSKALAGGAIVTVGGPALVYWLTPSEDELRARYNPDLRKKSLETRDEREQEFDEFVTRLKEYSK
SDKPIWIVVKEDEERRKKAALEATKAQQREADAQRDEMRREAGLTVAK*
Coding >OphauB2|5741
ATGGCTCCTGGCAAGTCATTCAACTGGCGACTCTGGTCAAAGGCACTCGCTGGAGGAGCGATTGTGACGGTGGGC
GGGCCAGCCTTGGTCTACTGGCTCACGCCCAGCGAAGACGAATTGCGGGCGCGGTATAACCCAGACTTGCGCAAA
AAGAGCCTCGAGACACGAGATGAGCGAGAGCAAGAGTTTGACGAATTTGTCACGCGACTCAAGGAGTACTCCAAA
TCGGATAAGCCAATCTGGATTGTGGTAAAGGAGGACGAGGAGCGGCGCAAAAAGGCTGCTCTTGAGGCGACCAAG
GCGCAACAGCGAGAGGCTGACGCACAGCGCGACGAGATGAGGCGCGAGGCTGGTCTGACGGTGGCCAAGTGA
Transcript >OphauB2|5741
ATGGCTCCTGGCAAGTCATTCAACTGGCGACTCTGGTCAAAGGCACTCGCTGGAGGAGCGATTGTGACGGTGGGC
GGGCCAGCCTTGGTCTACTGGCTCACGCCCAGCGAAGACGAATTGCGGGCGCGGTATAACCCAGACTTGCGCAAA
AAGAGCCTCGAGACACGAGATGAGCGAGAGCAAGAGTTTGACGAATTTGTCACGCGACTCAAGGAGTACTCCAAA
TCGGATAAGCCAATCTGGATTGTGGTAAAGGAGGACGAGGAGCGGCGCAAAAAGGCTGCTCTTGAGGCGACCAAG
GCGCAACAGCGAGAGGCTGACGCACAGCGCGACGAGATGAGGCGCGAGGCTGGTCTGACGGTGGCCAAGTGA
Gene >OphauB2|5741
ATGGCTCCTGGCAAGTCATTCAACTGGCGACTCTGGTCAAAGGCACTCGCTGGGTAAGAACAAAAACAGGCTCTT
GAGAAAGCTAGACATGGTGCTCCCTTGATGTGGCGAGCCAGAGGAGCAAGCATGGGAAGAGAGCCAGAAGCATGA
ATGAAATGAGCAAAAAGAAAAGACAGCGAGTGCGTACGTGAGGAGGGCTGACAAAGGGGGCAACAGAGGAGCGAT
TGTGACGGTGGGCGGGCCAGCCTTGGTCTACTGGCTCACGCCCAGCGAAGACGAATTGCGGGCGCGGTATAACCC
AGACTTGCGCAAAAAGAGCCTCGAGACACGAGATGAGCGAGAGCAAGAGTTTGACGAATTTGTCACGCGACTCAA
GGAGTACTCCAAATCGGATAAGCCAAGTTGGTGTCCTCCTCTTCTTGCTCGATTTCTTTGCCCCCTTGTTGCCCT
GTTTACCTGTTTCTTGCCTTGTTTTCTTTTTCCTCACTCGGACTAGTATTTCCTCCGTTCTTTTTCTCGCTATCT
TGCCGTGCTTTGCCGCGGCCGGCCCGCCCTTGATCCTCTGGGACAAAACAAAAACCTCCTTCCCGATCCTGTCCA
GTGTGGGACGCACCCAATCATCCCTGCGCATCTGTGTCTGTATTGTCTGCATGGTGCTGGAATATTGTGCTGACT
GGGCTTGCTGTCGTAATGCATAGTCTGGATTGTGGTAAAGGAGGACGAGGAGCGGCGCAAAAAGGCTGCTCTTGA
GGCGACCAAGGCGCAACAGCGAGAGGCTGACGCACAGCGCGACGAGATGAGGCGCGAGGCTGGTCTGACGGTGGC
CAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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