Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5700
Gene name
LocationContig_46:88998..90236
Strand-
Gene length (bp)1238
Transcript length (bp)1056
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 3.7E-37 66 319

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2 4 325 9.0E-63

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 51 73 22
2 150 172 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5700
MHFPLLESLRACSDWYLTVEPFIPQLYALPSRLMDVRDLDGLRQLYVNTNPLMSAFAFSIALGFVFFILSEVNRN
YSQVDRMWSLLPNLYIVHLAVWARLAGLPHKRIDLVAISTTLWSCRLTFNYWRRGGYQVGSEDYRWAIVKAKIPA
AIFFLFNMTFISFIQTVLLFAFSCPPAYAILLSSRFEPDITPGDLAYFTIELALIVSEWFSDGQQWNYQTAKHQY
NKDAKLPKGFRQTDLDRGFITSGLWAYSRHPNFFAEQSFWFMLYQWSCFATKSMYNWTFVGATSLILLFQGSTWL
TETITAAKYPEYSGYQRQVGMFMPRSLKGYAPPLDKPNGIRASELRKQKQK*
Coding >OphauB2|5700
ATGCATTTTCCTCTTCTCGAGTCCCTACGGGCCTGCAGCGACTGGTATCTCACCGTGGAGCCCTTCATTCCTCAG
CTCTACGCGTTGCCGTCGCGCCTGATGGACGTACGAGACCTCGATGGCTTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCATGTCGGCCTTTGCTTTCTCCATTGCCCTTGGCTTTGTCTTTTTTATTCTCTCCGAAGTCAATCGCAAC
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATCTTTATATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCACAAACGCATCGATCTCGTTGCCATCAGCACTACGCTCTGGAGTTGTCGATTAACCTTCAAT
TATTGGCGCAGAGGTGGCTACCAGGTGGGCTCCGAGGACTATAGATGGGCAATCGTCAAGGCCAAGATCCCGGCT
GCCATCTTCTTCCTTTTCAACATGACCTTCATCTCCTTTATACAGACCGTCTTATTGTTCGCCTTTTCTTGTCCT
CCAGCCTACGCCATTTTGCTCTCATCGCGCTTCGAACCCGATATCACACCAGGTGACCTTGCCTACTTCACCATT
GAGCTCGCTCTTATAGTTAGTGAATGGTTCAGCGACGGACAGCAGTGGAATTACCAGACCGCCAAGCATCAGTAT
AATAAAGATGCCAAGCTTCCCAAGGGGTTCAGACAGACAGACCTCGATCGAGGTTTCATCACGTCTGGCCTATGG
GCCTACAGCAGGCATCCTAACTTCTTTGCCGAGCAGAGCTTTTGGTTCATGCTGTATCAATGGAGCTGTTTTGCC
ACTAAATCCATGTATAACTGGACTTTTGTCGGCGCCACAAGCCTCATTCTACTCTTTCAAGGCTCAACCTGGCTG
ACTGAGACAATCACTGCTGCCAAGTACCCCGAGTATTCAGGATACCAGAGGCAAGTGGGTATGTTTATGCCACGC
TCGCTCAAAGGCTACGCACCGCCCTTAGACAAGCCCAATGGTATTAGAGCAAGCGAACTCCGTAAACAGAAGCAA
AAGTGA
Transcript >OphauB2|5700
ATGCATTTTCCTCTTCTCGAGTCCCTACGGGCCTGCAGCGACTGGTATCTCACCGTGGAGCCCTTCATTCCTCAG
CTCTACGCGTTGCCGTCGCGCCTGATGGACGTACGAGACCTCGATGGCTTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCATGTCGGCCTTTGCTTTCTCCATTGCCCTTGGCTTTGTCTTTTTTATTCTCTCCGAAGTCAATCGCAAC
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATCTTTATATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCACAAACGCATCGATCTCGTTGCCATCAGCACTACGCTCTGGAGTTGTCGATTAACCTTCAAT
TATTGGCGCAGAGGTGGCTACCAGGTGGGCTCCGAGGACTATAGATGGGCAATCGTCAAGGCCAAGATCCCGGCT
GCCATCTTCTTCCTTTTCAACATGACCTTCATCTCCTTTATACAGACCGTCTTATTGTTCGCCTTTTCTTGTCCT
CCAGCCTACGCCATTTTGCTCTCATCGCGCTTCGAACCCGATATCACACCAGGTGACCTTGCCTACTTCACCATT
GAGCTCGCTCTTATAGTTAGTGAATGGTTCAGCGACGGACAGCAGTGGAATTACCAGACCGCCAAGCATCAGTAT
AATAAAGATGCCAAGCTTCCCAAGGGGTTCAGACAGACAGACCTCGATCGAGGTTTCATCACGTCTGGCCTATGG
GCCTACAGCAGGCATCCTAACTTCTTTGCCGAGCAGAGCTTTTGGTTCATGCTGTATCAATGGAGCTGTTTTGCC
ACTAAATCCATGTATAACTGGACTTTTGTCGGCGCCACAAGCCTCATTCTACTCTTTCAAGGCTCAACCTGGCTG
ACTGAGACAATCACTGCTGCCAAGTACCCCGAGTATTCAGGATACCAGAGGCAAGTGGGTATGTTTATGCCACGC
TCGCTCAAAGGCTACGCACCGCCCTTAGACAAGCCCAATGGTATTAGAGCAAGCGAACTCCGTAAACAGAAGCAA
AAGTGA
Gene >OphauB2|5700
ATGCATTTTCCTCTTCTCGAGTCCCTACGGGCCTGCAGCGACTGGTATCTCACCGTGGAGCCCTTCATTCCTCAG
CTCTACGCGTTGCCGTCGCGCCTGATGGACGTACGAGACCTCGATGGCTTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCATGTCGGCCTTTGCTTTCTCCATTGCCCTTGGCTTTGTCTTTTTTATTCTCTCCGAAGTCAATCGCAAC
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATCTTTATATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCACAAACGCATCGATCTCGTTGCCATCAGCACTACGCTCTGGAGTGTATGACAAGACGCTGCC
TTTTCTCCGCCACTGAACTGAGCTCACAACTATACACAGTGTCGATTAACCTTCAATTATTGGCGCAGAGGTGGC
TACCAGGTGGGCTCCGAGGACTATAGATGGTGAGATAAAAGCCAAGCTCTTGCACTGCAGTCAGTACACTTATAC
ATGGCTCTTTAGGGCAATCGTCAAGGCCAAGATCCCGGCTGCCATCTTCTTCCTTTTCAACATGACCTTCATCTC
CTTTATACAGACCGTCTTATTGTTCGCCTTTTCTTGTCCTCCAGCCTACGCCATTTTGCTCTCATCGCGCTTCGA
ACCCGATATCACACCAGGTGACCTTGCCTACTTCACCATTGAGCTCGCTCTTATAGTTAGTGAATGGTTCAGCGA
CGGACAGCAGTGGAGTACGTTGCATTTCATCACGGCCATCTTTTTTTTGTGCGACACAGGGGTACTAATGCGACT
GGTCAGATTACCAGACCGCCAAGCATCAGTATAATAAAGATGCCAAGCTTCCCAAGGGGTTCAGACAGACAGACC
TCGATCGAGGTTTCATCACGTCTGGCCTATGGGCCTACAGCAGGCATCCTAACTTCTTTGCCGAGCAGAGCTTTT
GGTTCATGCTGTATCAATGGAGCTGTTTTGCCACTAAATCCATGTATAACTGGACTTTTGTCGGCGCCACAAGCC
TCATTCTACTCTTTCAAGGCTCAACCTGGCTGACTGAGACAATCACTGCTGCCAAGTACCCCGAGTATTCAGGAT
ACCAGAGGCAAGTGGGTATGTTTATGCCACGCTCGCTCAAAGGCTACGCACCGCCCTTAGACAAGCCCAATGGTA
TTAGAGCAAGCGAACTCCGTAAACAGAAGCAAAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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