© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5676 |
| Gene name | |
| Location | Contig_46:30120..31616 |
| Strand | - |
| Gene length (bp) | 1496 |
| Transcript length (bp) | 1431 |
| Coding sequence length (bp) | 1431 |
| Protein length (aa) | 477 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01151 | ELO | GNS1/SUR4 family | 5.3E-77 | 51 | 402 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q86JM5|Y2012_DICDI | Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1 | 1 | 287 | 2.0E-12 |
| sp|Q54TC9|SRE1_DICDI | Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum GN=sre1 PE=2 SV=1 | 169 | 279 | 2.0E-11 |
| sp|Q54CJ4|ELOA_DICDI | Elongation of fatty acids protein A OS=Dictyostelium discoideum GN=eloA PE=2 SV=1 | 179 | 281 | 2.0E-10 |
| sp|Q9EQC4|ELOV4_MOUSE | Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 | 160 | 278 | 2.0E-10 |
| sp|Q9GZR5|ELOV4_HUMAN | Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 | 184 | 278 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q86JM5|Y2012_DICDI | Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1 | 1 | 287 | 2.0E-12 |
| sp|Q54TC9|SRE1_DICDI | Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum GN=sre1 PE=2 SV=1 | 169 | 279 | 2.0E-11 |
| sp|Q54CJ4|ELOA_DICDI | Elongation of fatty acids protein A OS=Dictyostelium discoideum GN=eloA PE=2 SV=1 | 179 | 281 | 2.0E-10 |
| sp|Q9EQC4|ELOV4_MOUSE | Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 | 160 | 278 | 2.0E-10 |
| sp|Q9GZR5|ELOV4_HUMAN | Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 | 184 | 278 | 3.0E-10 |
| sp|Q20303|ELO6_CAEEL | Elongation of very long chain fatty acids protein 6 OS=Caenorhabditis elegans GN=elo-6 PE=1 SV=1 | 171 | 278 | 5.0E-10 |
| sp|Q7LKX0|ELOH2_SCHPO | Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3 SV=3 | 173 | 291 | 1.0E-09 |
| sp|Q3S8M4|ELOV4_MACMU | Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 | 184 | 278 | 1.0E-09 |
| sp|Q95K73|ELOV4_MACFA | Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 | 184 | 278 | 1.0E-09 |
| sp|Q9HB03|ELOV3_HUMAN | Elongation of very long chain fatty acids protein 3 OS=Homo sapiens GN=ELOVL3 PE=1 SV=2 | 176 | 280 | 3.0E-09 |
| sp|A1L3X0|ELOV7_HUMAN | Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 | 184 | 295 | 3.0E-09 |
| sp|P49191|ELO3_CAEEL | Putative fatty acid elongation protein 3 OS=Caenorhabditis elegans GN=elo-3 PE=1 SV=2 | 161 | 285 | 6.0E-09 |
| sp|Q32NI8|ELOV5_XENLA | Elongation of very long chain fatty acids protein 5 OS=Xenopus laevis GN=elovl5 PE=2 SV=1 | 184 | 281 | 6.0E-09 |
| sp|Q5M8U1|ELOV5_XENTR | Elongation of very long chain fatty acids protein 5 OS=Xenopus tropicalis GN=elovl5 PE=2 SV=1 | 184 | 281 | 1.0E-08 |
| sp|D4A612|ELOV2_RAT | Elongation of very long chain fatty acids protein 2 OS=Rattus norvegicus GN=Elovl2 PE=1 SV=1 | 164 | 285 | 3.0E-08 |
| sp|Q9NXB9|ELOV2_HUMAN | Elongation of very long chain fatty acids protein 2 OS=Homo sapiens GN=ELOVL2 PE=1 SV=2 | 184 | 285 | 5.0E-08 |
| sp|Q9JLJ4|ELOV2_MOUSE | Elongation of very long chain fatty acids protein 2 OS=Mus musculus GN=Elovl2 PE=1 SV=1 | 184 | 285 | 6.0E-08 |
| sp|Q9D2Y9|ELOV7_MOUSE | Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 | 184 | 291 | 7.0E-08 |
| sp|Q20300|ELO5_CAEEL | Elongation of very long chain fatty acids protein 5 OS=Caenorhabditis elegans GN=elo-5 PE=1 SV=1 | 184 | 286 | 1.0E-07 |
| sp|P39540|ELO1_YEAST | Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1 | 175 | 331 | 2.0E-07 |
| sp|D4ADY9|ELOV7_RAT | Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 | 184 | 291 | 2.0E-07 |
| sp|P40319|ELO3_YEAST | Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO3 PE=1 SV=1 | 187 | 294 | 2.0E-07 |
| sp|A0JNC4|ELOV7_BOVIN | Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 | 184 | 278 | 2.0E-07 |
| sp|P25358|ELO2_YEAST | Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO2 PE=1 SV=1 | 175 | 278 | 4.0E-07 |
| sp|Q9BW60|ELOV1_HUMAN | Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 | 184 | 296 | 8.0E-07 |
| sp|Q2KJD9|ELOV5_BOVIN | Elongation of very long chain fatty acids protein 5 OS=Bos taurus GN=ELOVL5 PE=2 SV=1 | 184 | 278 | 1.0E-06 |
| sp|Q8BHI7|ELOV5_MOUSE | Elongation of very long chain fatty acids protein 5 OS=Mus musculus GN=Elovl5 PE=1 SV=1 | 184 | 278 | 1.0E-06 |
| sp|Q9NYP7|ELOV5_HUMAN | Elongation of very long chain fatty acids protein 5 OS=Homo sapiens GN=ELOVL5 PE=1 SV=1 | 184 | 278 | 2.0E-06 |
| sp|Q920L7|ELOV5_RAT | Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus GN=Elovl5 PE=1 SV=1 | 184 | 278 | 2.0E-06 |
| sp|Q6PC64|ELOV6_DANRE | Elongation of very long chain fatty acids protein 6 OS=Danio rerio GN=elovl6 PE=2 SV=1 | 181 | 281 | 7.0E-06 |
| sp|Q03574|ELO4_CAEEL | Putative fatty acid elongation protein 4 OS=Caenorhabditis elegans GN=elo-4 PE=3 SV=1 | 159 | 261 | 8.0E-06 |
| sp|Q1HRV8|ELVL1_AEDAE | Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 | 184 | 294 | 1.0E-05 |
| sp|Q4R516|ELOV5_MACFA | Elongation of very long chain fatty acids protein 5 OS=Macaca fascicularis GN=ELOVL5 PE=2 SV=1 | 186 | 278 | 1.0E-05 |
| sp|Q5RFL5|ELOV5_PONAB | Elongation of very long chain fatty acids protein 5 OS=Pongo abelii GN=ELOVL5 PE=2 SV=1 | 184 | 275 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009922 | fatty acid elongase activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0004312 | fatty acid synthase activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016740 | transferase activity | No |
| GO:0005575 | cellular_component | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| 2 | 89 | 111 | 22 |
| 3 | 180 | 202 | 22 |
| 4 | 215 | 237 | 22 |
| 5 | 242 | 264 | 22 |
| 6 | 276 | 298 | 22 |
| 7 | 371 | 393 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5676 MADAQSVVVSWPEAALFRFPPTNAPEPLAPAPAALSVMRPFNIAQPLYAWALEVTVPLTVATVYAVAVKALNRYN GSRNKQPWAVSKTRLFHCFVVAHNVLLAVYSAWTFVGMLATMRRAIVAPTHSDGLAATLDSLCRLHGPPGLGASA YFNETTQAWQSLDSSLDASSMGRIWNEGLAYYGWIFYLSKFYEVLDTFIILAKGKSSSTLQTYHHAGAMICMWAG MRYMSAPIWMFVLVNSFIHSLMYTYYTLTAFAVKVPVGVKRALTSMQITQFLVGATYAMTHSFIQYLVPVVTSKT ITVPEASSALPLATATPSPAGMLESLRKLLLGSQHVAKAAAAPAVSPSFKTIVVSETSRVTQPCIVTTGETFAIW LNVLYLAPLTWLFVSFFVTSYVKRSNAAHKIKGALQRHQNNVILAEKAGWDAARDVEREVYGGQDLVHAMTKNTQ DANGSADSQSESSVASRVQGRARRRA* |
| Coding | >OphauB2|5676 ATGGCTGACGCACAGAGCGTGGTGGTGTCGTGGCCCGAAGCCGCGCTCTTCCGCTTTCCTCCCACCAATGCCCCC GAGCCTCTGGCGCCGGCCCCCGCAGCCCTTTCCGTGATGCGGCCCTTCAACATTGCACAGCCGCTGTACGCATGG GCCCTCGAGGTGACGGTGCCTCTGACTGTTGCCACGGTGTACGCTGTGGCTGTCAAGGCGCTCAACCGCTACAAT GGCTCGCGCAACAAGCAGCCCTGGGCGGTCAGCAAGACGCGCCTCTTCCACTGCTTTGTCGTGGCTCACAATGTG CTGCTTGCCGTCTATTCGGCATGGACCTTTGTTGGAATGCTGGCCACGATGCGCCGCGCCATTGTGGCGCCCACG CACTCTGACGGCCTGGCAGCCACGCTTGATAGCCTTTGCCGTCTCCATGGCCCTCCCGGCCTAGGAGCCTCGGCC TACTTTAACGAGACGACGCAAGCTTGGCAGAGCCTTGACTCTTCTCTGGACGCCTCGAGCATGGGCCGCATCTGG AACGAGGGCCTGGCCTACTATGGCTGGATCTTTTACCTGAGCAAATTCTACGAGGTGCTCGACACCTTTATCATC CTGGCCAAGGGCAAGTCCAGCTCGACCTTGCAGACATACCATCACGCCGGCGCCATGATATGCATGTGGGCTGGC ATGCGCTACATGTCTGCCCCCATCTGGATGTTTGTTCTCGTCAACTCGTTTATTCACTCTCTCATGTACACCTAC TACACCCTGACTGCCTTTGCCGTCAAGGTTCCCGTGGGTGTCAAGCGCGCTCTGACCTCGATGCAAATCACGCAG TTTCTCGTCGGTGCAACCTACGCCATGACGCATTCATTCATCCAATACCTTGTCCCCGTCGTCACGTCCAAGACT ATCACGGTCCCGGAGGCTTCGTCGGCGCTGCCCCTGGCCACTGCGACCCCCTCGCCCGCCGGCATGCTCGAGTCT CTCAGAAAGCTGCTTTTGGGCTCGCAACATGTGGCAAAGGCTGCTGCCGCACCTGCTGTGTCACCCAGTTTTAAG ACAATTGTTGTCTCGGAAACAAGTCGAGTGACACAGCCTTGCATTGTCACCACGGGCGAGACTTTTGCCATTTGG CTCAACGTGCTCTACCTGGCGCCCCTGACCTGGCTCTTTGTCAGCTTCTTCGTTACGAGCTACGTCAAGCGCAGC AATGCTGCCCACAAGATCAAGGGCGCCCTGCAGCGCCACCAAAACAATGTGATTCTTGCCGAAAAGGCTGGCTGG GACGCTGCGCGCGATGTCGAGAGGGAGGTGTATGGTGGCCAAGACTTGGTTCACGCCATGACCAAGAATACTCAG GATGCCAATGGCAGTGCTGACTCTCAGAGCGAGTCGTCGGTTGCTTCCAGGGTCCAGGGGAGGGCCAGAAGGCGT GCCTAG |
| Transcript | >OphauB2|5676 ATGGCTGACGCACAGAGCGTGGTGGTGTCGTGGCCCGAAGCCGCGCTCTTCCGCTTTCCTCCCACCAATGCCCCC GAGCCTCTGGCGCCGGCCCCCGCAGCCCTTTCCGTGATGCGGCCCTTCAACATTGCACAGCCGCTGTACGCATGG GCCCTCGAGGTGACGGTGCCTCTGACTGTTGCCACGGTGTACGCTGTGGCTGTCAAGGCGCTCAACCGCTACAAT GGCTCGCGCAACAAGCAGCCCTGGGCGGTCAGCAAGACGCGCCTCTTCCACTGCTTTGTCGTGGCTCACAATGTG CTGCTTGCCGTCTATTCGGCATGGACCTTTGTTGGAATGCTGGCCACGATGCGCCGCGCCATTGTGGCGCCCACG CACTCTGACGGCCTGGCAGCCACGCTTGATAGCCTTTGCCGTCTCCATGGCCCTCCCGGCCTAGGAGCCTCGGCC TACTTTAACGAGACGACGCAAGCTTGGCAGAGCCTTGACTCTTCTCTGGACGCCTCGAGCATGGGCCGCATCTGG AACGAGGGCCTGGCCTACTATGGCTGGATCTTTTACCTGAGCAAATTCTACGAGGTGCTCGACACCTTTATCATC CTGGCCAAGGGCAAGTCCAGCTCGACCTTGCAGACATACCATCACGCCGGCGCCATGATATGCATGTGGGCTGGC ATGCGCTACATGTCTGCCCCCATCTGGATGTTTGTTCTCGTCAACTCGTTTATTCACTCTCTCATGTACACCTAC TACACCCTGACTGCCTTTGCCGTCAAGGTTCCCGTGGGTGTCAAGCGCGCTCTGACCTCGATGCAAATCACGCAG TTTCTCGTCGGTGCAACCTACGCCATGACGCATTCATTCATCCAATACCTTGTCCCCGTCGTCACGTCCAAGACT ATCACGGTCCCGGAGGCTTCGTCGGCGCTGCCCCTGGCCACTGCGACCCCCTCGCCCGCCGGCATGCTCGAGTCT CTCAGAAAGCTGCTTTTGGGCTCGCAACATGTGGCAAAGGCTGCTGCCGCACCTGCTGTGTCACCCAGTTTTAAG ACAATTGTTGTCTCGGAAACAAGTCGAGTGACACAGCCTTGCATTGTCACCACGGGCGAGACTTTTGCCATTTGG CTCAACGTGCTCTACCTGGCGCCCCTGACCTGGCTCTTTGTCAGCTTCTTCGTTACGAGCTACGTCAAGCGCAGC AATGCTGCCCACAAGATCAAGGGCGCCCTGCAGCGCCACCAAAACAATGTGATTCTTGCCGAAAAGGCTGGCTGG GACGCTGCGCGCGATGTCGAGAGGGAGGTGTATGGTGGCCAAGACTTGGTTCACGCCATGACCAAGAATACTCAG GATGCCAATGGCAGTGCTGACTCTCAGAGCGAGTCGTCGGTTGCTTCCAGGGTCCAGGGGAGGGCCAGAAGGCGT GCCTAG |
| Gene | >OphauB2|5676 ATGGCTGACGCACAGAGCGTGGTGGTGTCGTGGCCCGAAGCCGCGCTCTTCCGCTTTCCTCCCACCAATGCCCCC GAGCCTCTGGCGCCGGCCCCCGCAGCCCTTTCCGTGATGCGGCCCTTCAACATTGCACAGCCGCTGTACGCATGG GCCCTCGAGGTGACGGTGCCTCTGACTGTTGCCACGGTGTACGCTGTGGCTGTCAAGGCGCTCAACCGCTACAAT GGCTCGCGCAACAAGCAGCCCTGGGCGGTCAGCAAGACGCGCCTCTTCCACTGCTTTGTCGTGGCTCACAATGTG CTGCTTGCCGTCTATTCGGCATGGACCTTTGTTGGAATGCTGGCCACGATGCGCCGCGCCATTGTGGCGCCCACG CACTCTGACGGCCTGGCAGCCACGCTTGATAGCCTTTGCCGTCTCCATGGCCCTCCCGGCCTAGGAGCCTCGGCC TACTTTAACGAGACGACGCAAGCTTGGCAGAGCCTTGACTCTTCTCTGGACGCCTCGAGCATGGGCCGCATCTGG AACGAGGGCCTGGCCTACTATGGCTGGATCTTTTACCTGAGCAAATTCTACGAGGTGCTCGACACCTTTATCATC CTGGCCAAGGGCAAGTCCAGCTCGACCTTGCAGACATACCATCACGCCGGCGCCATGATATGCATGTGGGCTGGC ATGCGCTACATGTCTGCCCCCATCTGGATGTTTGTTCTCGTCAACTCGTTTATTCACTCTCTCATGGTTAGTCGC TCCTCGTCCTCTTGCTGCACATGGACCGACGTGGACTAAAAGACACATGCCTCCAGTACACCTACTACACCCTGA CTGCCTTTGCCGTCAAGGTTCCCGTGGGTGTCAAGCGCGCTCTGACCTCGATGCAAATCACGCAGTTTCTCGTCG GTGCAACCTACGCCATGACGCATTCATTCATCCAATACCTTGTCCCCGTCGTCACGTCCAAGACTATCACGGTCC CGGAGGCTTCGTCGGCGCTGCCCCTGGCCACTGCGACCCCCTCGCCCGCCGGCATGCTCGAGTCTCTCAGAAAGC TGCTTTTGGGCTCGCAACATGTGGCAAAGGCTGCTGCCGCACCTGCTGTGTCACCCAGTTTTAAGACAATTGTTG TCTCGGAAACAAGTCGAGTGACACAGCCTTGCATTGTCACCACGGGCGAGACTTTTGCCATTTGGCTCAACGTGC TCTACCTGGCGCCCCTGACCTGGCTCTTTGTCAGCTTCTTCGTTACGAGCTACGTCAAGCGCAGCAATGCTGCCC ACAAGATCAAGGGCGCCCTGCAGCGCCACCAAAACAATGTGATTCTTGCCGAAAAGGCTGGCTGGGACGCTGCGC GCGATGTCGAGAGGGAGGTGTATGGTGGCCAAGACTTGGTTCACGCCATGACCAAGAATACTCAGGATGCCAATG GCAGTGCTGACTCTCAGAGCGAGTCGTCGGTTGCTTCCAGGGTCCAGGGGAGGGCCAGAAGGCGTGCCTAG |