Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5650
Gene name
LocationContig_45:115382..116075
Strand-
Gene length (bp)693
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 3.6E-18 46 169

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 79 101 22
3 114 136 22
4 151 173 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5650
MAPQKPLRDWLYLAMTAAQISGSLFLDLVPFYPRPLWHPPWSALHFLVTLRSAYTNFTKDPYFPPLSSPSIPAYP
AAQAWFLAFLYIKAFVNLPLCLYLSRRLGTSKTSGPVEIASLVLACISAMGATTCCVDLWHMGPNKLSPSKKPLL
IYGVYMPFAIIPAMMAVDMSLRLLARVQRVQEKSKRQ*
Coding >OphauB2|5650
ATGGCGCCACAGAAACCTCTGCGTGACTGGCTCTATCTGGCCATGACGGCTGCTCAAATCTCCGGTAGTCTTTTT
CTCGACCTCGTGCCCTTTTACCCTCGCCCCCTCTGGCATCCCCCTTGGTCCGCCTTGCATTTTCTTGTCACGCTT
CGTTCCGCCTACACAAACTTTACCAAAGACCCTTACTTCCCGCCACTTTCCTCTCCGTCGATTCCTGCATACCCG
GCCGCCCAGGCCTGGTTCCTCGCCTTTCTATACATCAAGGCCTTTGTCAATCTCCCGCTATGTCTCTATCTGTCG
CGCCGGCTGGGCACCAGCAAGACTAGCGGCCCTGTAGAAATTGCCTCGCTGGTGCTTGCCTGCATCTCGGCCATG
GGAGCCACGACGTGTTGTGTCGACTTGTGGCACATGGGTCCGAATAAGCTGAGTCCAAGCAAGAAGCCCTTGCTG
ATATATGGCGTCTACATGCCCTTTGCCATTATTCCTGCCATGATGGCTGTCGACATGTCTCTCAGGCTCTTGGCC
AGGGTGCAGCGAGTCCAGGAAAAGTCAAAACGCCAATAA
Transcript >OphauB2|5650
ATGGCGCCACAGAAACCTCTGCGTGACTGGCTCTATCTGGCCATGACGGCTGCTCAAATCTCCGGTAGTCTTTTT
CTCGACCTCGTGCCCTTTTACCCTCGCCCCCTCTGGCATCCCCCTTGGTCCGCCTTGCATTTTCTTGTCACGCTT
CGTTCCGCCTACACAAACTTTACCAAAGACCCTTACTTCCCGCCACTTTCCTCTCCGTCGATTCCTGCATACCCG
GCCGCCCAGGCCTGGTTCCTCGCCTTTCTATACATCAAGGCCTTTGTCAATCTCCCGCTATGTCTCTATCTGTCG
CGCCGGCTGGGCACCAGCAAGACTAGCGGCCCTGTAGAAATTGCCTCGCTGGTGCTTGCCTGCATCTCGGCCATG
GGAGCCACGACGTGTTGTGTCGACTTGTGGCACATGGGTCCGAATAAGCTGAGTCCAAGCAAGAAGCCCTTGCTG
ATATATGGCGTCTACATGCCCTTTGCCATTATTCCTGCCATGATGGCTGTCGACATGTCTCTCAGGCTCTTGGCC
AGGGTGCAGCGAGTCCAGGAAAAGTCAAAACGCCAATAA
Gene >OphauB2|5650
ATGGCGCCACAGAAACCTCTGCGTGACTGGCTCTATCTGGCCATGACGGCTGCTCAAATCTCCGGTAGTCTTTGT
ACGCCTCACCTCGCCCCCACCTGTTGAGCGGTAAAGTAAACAAACAAACTAACCGCCTCTCGAGTTCTCGACCTC
GTGCCCTTTTACCCTCGCCCCCTCTGGCATCCCCCTTGGTCCGCCTTGCATTTTCTTGTCACGCTTCGTTCCGCC
TACACAAACTTTACCAAAGACCCTTACTTCCCGCCACTTTCCTCTCCGTCGATTCCTGCATACCCGGCCGCCCAG
GCCTGGTTCCTCGCCTTTCTATACATCAAGGCCTTTGTCAATCTCCCGCTATGTCTCTATCTGTCGCGCCGGCTG
GGCACCAGCAAGACTAGCGGCCCTGTAGAAATTGCCTCGCTGGTGCTTGCCTGCATCTCGGCCATGGGAGCCACG
ACGTGTTGTGTCGACTTGTGGCACATGGGTCCGAATAAGCTGAGTCCAAGCAAGAAGCCCTTGCTGATATATGGC
GTCTACATGCCCTTTGCCATTATTCGTGAGACTTGCCCTTGGGACTTGCACGCGCCTCTCGCAAGTATAGCGACT
AATCAGATAATAGCTGCCATGATGGCTGTCGACATGTCTCTCAGGCTCTTGGCCAGGGTGCAGCGAGTCCAGGAA
AAGTCAAAACGCCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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