Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5527
Gene name
LocationContig_43:88132..89594
Strand-
Gene length (bp)1462
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 4.4E-26 26 313

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 27 313 3.0E-48
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 27 325 3.0E-47
sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 15 313 3.0E-47
sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 27 313 1.0E-45
sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 35 326 1.0E-41
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 27 313 3.0E-48
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 27 325 3.0E-47
sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 15 313 3.0E-47
sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 27 313 1.0E-45
sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 35 326 1.0E-41
sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1 31 339 1.0E-39
sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 15 313 7.0E-39
sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 39 313 2.0E-36
sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 26 325 4.0E-25
sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 26 324 7.0E-25
sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 15 319 3.0E-23
sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 28 313 7.0E-20
sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 28 324 2.0E-19
sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 28 313 2.0E-18
sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 41 309 1.0E-17
sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 15 312 1.0E-17
sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 39 312 5.0E-17
sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 41 309 7.0E-15
sp|Q5VQL3|PPT3_ORYSJ Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 40 313 5.0E-14
sp|P0CK96|S352B_HUMAN Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B PE=2 SV=1 26 330 7.0E-14
sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1 33 314 1.0E-10
sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 11 313 2.0E-09
sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1 31 331 3.0E-09
sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1 42 313 2.0E-08
sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 4 313 2.0E-08
sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 10 313 6.0E-08
sp|Q69VR7|PPT1_ORYSJ Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 31 313 9.0E-08
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 14 313 1.0E-07
sp|Q8RXN3|PPT1_ARATH Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 10 313 4.0E-07
sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1 83 313 5.0E-07
sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1 35 325 6.0E-07
sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 31 313 9.0E-07
sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1 31 314 1.0E-06
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 31 313 1.0E-06
sp|Q6ICL7|S35E4_HUMAN Solute carrier family 35 member E4 OS=Homo sapiens GN=SLC35E4 PE=2 SV=1 31 312 2.0E-06
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 31 314 2.0E-06
sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 6 313 4.0E-06
sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1 103 313 1.0E-05
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 31 314 1.0E-05
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 99 121 22
2 141 163 22
3 170 192 22
4 207 229 22
5 241 263 22
6 267 289 22
7 294 316 22
8 351 373 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5527
MASSAAERFAVEDGDAAPARGLHPALHIANWIFFSNLTILFNKWILDTAGFRYPILLTCWHLVFSTLATQLLART
TTLLDSRHKLPITPRLYLRTICPIGLFYSGSLVCSNLVYLYLSVAFIQMLKSAAPVAVLFASWAWRVANPSLPAL
LNICVIVAGVALASVGEIHFSLVGFVYQLGGILFEAVRIVMIQVMLSGERLRMDPLVGLYYYAPVCAVMNLIVAM
FAEVPRFQLQHLTNVGFSLLFLNALIAFLLNVASVFLIGKTSGLVMTLTGIFKNILLIVVSIFIWNTPISLLQAV
GYSIALAGLIYYSVGYDQLALAAQATVAWTTATLGFASSSASSNSSSSVLLARRLLLLVAVALVAIFIFVMALRH
YDPRARAIFSLPALFGSER*
Coding >OphauB2|5527
ATGGCTTCGTCTGCCGCTGAGCGCTTTGCCGTCGAGGATGGCGATGCGGCGCCCGCAAGAGGCCTGCATCCCGCG
CTGCACATTGCCAACTGGATCTTCTTTTCCAACCTGACTATTCTCTTCAACAAGTGGATTCTCGACACTGCGGGC
TTTCGCTACCCGATTCTGCTTACCTGCTGGCATCTCGTCTTCTCCACCCTGGCCACGCAGCTGCTGGCGCGCACC
ACGACGCTGCTCGACTCGCGCCACAAGCTGCCCATTACGCCGCGCCTCTACTTGCGTACAATATGCCCCATTGGT
CTCTTTTACTCGGGCTCGCTAGTCTGCTCAAACCTCGTCTACCTCTACCTCTCCGTCGCCTTTATCCAGATGCTC
AAGTCGGCTGCCCCCGTTGCCGTGCTCTTTGCCTCGTGGGCCTGGCGCGTCGCCAATCCCAGCCTGCCTGCCCTG
CTCAACATTTGCGTCATTGTCGCCGGCGTTGCCCTCGCCTCGGTGGGCGAGATTCACTTTTCCCTCGTGGGCTTT
GTCTACCAGCTCGGCGGCATCTTGTTTGAGGCTGTCCGCATCGTCATGATTCAAGTCATGCTCTCGGGCGAGCGT
CTTCGCATGGATCCCCTCGTGGGCCTTTACTACTACGCCCCCGTCTGCGCCGTCATGAACCTCATTGTCGCCATG
TTTGCCGAGGTTCCACGTTTTCAGCTGCAGCACCTCACAAACGTTGGCTTCTCCTTGCTCTTCCTCAATGCCCTC
ATTGCCTTTCTTCTCAACGTTGCCAGCGTCTTTCTTATTGGCAAAACCTCGGGCCTTGTCATGACCCTGACGGGC
ATCTTCAAAAACATTCTCCTCATTGTCGTGTCCATTTTCATATGGAACACCCCAATTTCTCTTCTTCAGGCCGTT
GGCTACTCCATTGCCCTTGCAGGCCTCATTTATTACTCGGTTGGCTACGACCAGCTCGCCCTCGCTGCCCAAGCC
ACTGTCGCCTGGACCACGGCTACTCTGGGCTTTGCCTCCTCGTCGGCCTCTTCCAACTCGTCCTCGTCAGTCTTG
CTTGCTCGCAGGCTGCTCCTCTTGGTTGCTGTCGCCCTCGTCGCCATTTTCATCTTTGTCATGGCTTTGCGACAT
TATGATCCAAGGGCAAGAGCCATCTTTTCTCTTCCAGCCTTGTTTGGTAGCGAGCGATGA
Transcript >OphauB2|5527
ATGGCTTCGTCTGCCGCTGAGCGCTTTGCCGTCGAGGATGGCGATGCGGCGCCCGCAAGAGGCCTGCATCCCGCG
CTGCACATTGCCAACTGGATCTTCTTTTCCAACCTGACTATTCTCTTCAACAAGTGGATTCTCGACACTGCGGGC
TTTCGCTACCCGATTCTGCTTACCTGCTGGCATCTCGTCTTCTCCACCCTGGCCACGCAGCTGCTGGCGCGCACC
ACGACGCTGCTCGACTCGCGCCACAAGCTGCCCATTACGCCGCGCCTCTACTTGCGTACAATATGCCCCATTGGT
CTCTTTTACTCGGGCTCGCTAGTCTGCTCAAACCTCGTCTACCTCTACCTCTCCGTCGCCTTTATCCAGATGCTC
AAGTCGGCTGCCCCCGTTGCCGTGCTCTTTGCCTCGTGGGCCTGGCGCGTCGCCAATCCCAGCCTGCCTGCCCTG
CTCAACATTTGCGTCATTGTCGCCGGCGTTGCCCTCGCCTCGGTGGGCGAGATTCACTTTTCCCTCGTGGGCTTT
GTCTACCAGCTCGGCGGCATCTTGTTTGAGGCTGTCCGCATCGTCATGATTCAAGTCATGCTCTCGGGCGAGCGT
CTTCGCATGGATCCCCTCGTGGGCCTTTACTACTACGCCCCCGTCTGCGCCGTCATGAACCTCATTGTCGCCATG
TTTGCCGAGGTTCCACGTTTTCAGCTGCAGCACCTCACAAACGTTGGCTTCTCCTTGCTCTTCCTCAATGCCCTC
ATTGCCTTTCTTCTCAACGTTGCCAGCGTCTTTCTTATTGGCAAAACCTCGGGCCTTGTCATGACCCTGACGGGC
ATCTTCAAAAACATTCTCCTCATTGTCGTGTCCATTTTCATATGGAACACCCCAATTTCTCTTCTTCAGGCCGTT
GGCTACTCCATTGCCCTTGCAGGCCTCATTTATTACTCGGTTGGCTACGACCAGCTCGCCCTCGCTGCCCAAGCC
ACTGTCGCCTGGACCACGGCTACTCTGGGCTTTGCCTCCTCGTCGGCCTCTTCCAACTCGTCCTCGTCAGTCTTG
CTTGCTCGCAGGCTGCTCCTCTTGGTTGCTGTCGCCCTCGTCGCCATTTTCATCTTTGTCATGGCTTTGCGACAT
TATGATCCAAGGGCAAGAGCCATCTTTTCTCTTCCAGCCTTGTTTGGTAGCGAGCGATGA
Gene >OphauB2|5527
ATGGCTTCGTCTGCCGCTGAGCGCTTTGCCGTCGAGGATGGCGATGCGGCGCCCGCAAGAGGCCTGCATCCCGCG
CTGCACATTGCGTGAGTGGACGGCGTCTGGACGAGGCTGTTGCGTGGCTGGCTAATGTCTCGCGGCAGCAACTGG
ATCTTCTTTTCCAACCTGACTATTCTCTTCAACAAGTGGATTCTCGACACTGCGGGCTTTCGTACGTGCTTGTTT
GCTGCCTCGCTGGCTTGTAGCTAACCAGTGCTTCCCCCTGACTTTTTTACTCGCTAGGCTACCGTGCGCCATTCC
TCTCTCCTCTCCTCTCTCCTCTCCTCTCTCACCATGGCTGCTCATGACTGACACGCGCTGCAGCGATTCTGCTTA
CCTGCTGGCATCTCGTCTTCTCCACCCTGGCCACGCAGCTGCTGGCGCGCACCACGACGCTGCTCGACTCGCGCC
ACAAGCTGCCCATTACGCCGCGCCTCTACTTGCGTACAATATGCCCCATTGGTCTCTTTTACTCGGGCTCGCTAG
TCTGCTCAAACCTCGTCTACCTCTACCTCTCCGTCGCCTTTATCCAGATGCTCAAGTCGGCTGCCCCCGTTGCCG
TGCTCTTTGCCTCGTGGGCCTGGCGCGTCGCCAATCCCAGCCTGCCTGCCCTGCTCAACATTTGCGTCATTGTCG
CCGGCGTTGCCCTCGCCTCGGTGGGCGAGATTCACTTTTCCCTCGTGGGCTTTGTCTACCAGCTCGGCGGCATCT
TGTTTGAGGCTGTCCGCATCGTCATGATTCAAGTCATGCTCTCGGGCGAGCGTCTTCGCATGGATCCCCTCGTGG
GCCTTTACTACTACGCCCCCGTCTGCGCCGTCATGAACCTCATTGTCGCCATGTTTGCCGAGGTTCCACGTTTTC
AGCTGCAGCACCTCACAAACGTTGGCTTCTCCTTGCTCTTCCTCAATGCCCTCATTGCCTTTCTTCTCAACGTTG
CCAGCGTCTTTCTTGTATGTGCCCCCCCTTTGCTCTCCCTTTGAAAATTGCACTCATCGACTCGCTCTGCTCACC
CCTTGGCTTCTAGATTGGCAAAACCTCGGGCCTTGTCATGACCCTGACGGGCATCTTCAAAAACATTCTCCTCAT
TGTCGTGTCCATTTTCATATGGAACACCCCAATTTCTCTTCTTCAGGCCGTTGGCTACTCCATTGCCCTTGCAGG
CCTCATTTATTACTCGGTTGGCTACGACCAGCTCGCCCTCGCTGCCCAAGCCACTGTCGCCTGGACCACGGCTAC
TCTGGGCTTTGCCTCCTCGTCGGCCTCTTCCAACTCGTCCTCGTCAGTCTTGCTTGCTCGCAGGCTGCTCCTCTT
GGTTGCTGTCGCCCTCGTCGCCATTTTCATCTTTGTCATGGCTTTGCGACATTATGATCCAAGGGCAAGAGCCAT
CTTTTCTCTTCCAGCCTTGTTTGGTAGCGAGCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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