Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|5508
Gene name
Location	Contig_43:35738..36668
Strand	+
Gene length (bp)	930
Transcript length (bp)	768
Coding sequence length (bp)	768
Protein length (aa)	256

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13398	Peptidase_M50B	Peptidase M50B-like	1.2E-59	28	229

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	21	43	22
2	89	111	22
3	116	138	22
4	143	165	22
5	170	187	17
6	216	238	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|5508 MLQEQQQLVARNLQHPTRTQQVTLGVIAGYVVVIAILWNVPYLRMVLWPFKMLVIAFHEFGHASTAMLTGGRVKS ISLDPNEGGVTHLQGGISAITLPAGYLGSSIIGALLTFCGFNIVASKVASFVLGLCFLLTLWWGKRDWLTVLTVL LAVGLLVACWFIVHAEALRFVVLFIGVMSSLYSVWDICDDLILRKVNSSDASVFAKRYGGSSQCWGVIWSIISIL VMALGIIAGLAAFSQSFEQQQQDSKHFIPT*
Coding	>OphauB2\|5508 ATGCTCCAGGAGCAGCAGCAGCTCGTTGCGCGCAATCTCCAGCACCCGACGCGCACGCAGCAGGTGACGCTGGGC GTTATTGCTGGCTATGTTGTGGTGATTGCTATTTTGTGGAACGTGCCCTATCTTCGAATGGTGCTCTGGCCCTTC AAGATGCTCGTCATCGCCTTTCACGAATTCGGCCACGCTTCAACAGCCATGCTCACTGGCGGCCGCGTCAAGTCC ATCAGCCTCGACCCCAACGAAGGCGGCGTCACCCATCTCCAGGGCGGCATCAGCGCCATCACCCTCCCCGCCGGC TACCTTGGCTCCTCCATCATTGGCGCCCTCCTGACCTTTTGCGGCTTCAACATTGTCGCCTCAAAGGTGGCCAGC TTTGTCCTTGGCCTCTGCTTCCTCCTCACCCTGTGGTGGGGCAAGCGCGACTGGCTCACCGTCTTGACCGTTTTG CTCGCCGTTGGCCTGCTCGTTGCCTGCTGGTTCATTGTCCACGCCGAGGCGCTGCGCTTTGTCGTGCTCTTTATT GGCGTCATGTCCTCCCTCTATAGCGTCTGGGACATTTGCGACGATCTCATTCTGCGCAAGGTCAATTCGTCGGAT GCCAGTGTCTTTGCCAAGCGCTACGGCGGCTCCTCCCAGTGCTGGGGCGTCATTTGGTCCATTATTTCCATTCTC GTCATGGCCCTGGGCATTATCGCTGGCCTCGCTGCCTTTTCCCAGTCCTTTGAGCAGCAGCAGCAGGATTCGAAG CACTTTATTCCTACTTGA
Transcript	>OphauB2\|5508 ATGCTCCAGGAGCAGCAGCAGCTCGTTGCGCGCAATCTCCAGCACCCGACGCGCACGCAGCAGGTGACGCTGGGC GTTATTGCTGGCTATGTTGTGGTGATTGCTATTTTGTGGAACGTGCCCTATCTTCGAATGGTGCTCTGGCCCTTC AAGATGCTCGTCATCGCCTTTCACGAATTCGGCCACGCTTCAACAGCCATGCTCACTGGCGGCCGCGTCAAGTCC ATCAGCCTCGACCCCAACGAAGGCGGCGTCACCCATCTCCAGGGCGGCATCAGCGCCATCACCCTCCCCGCCGGC TACCTTGGCTCCTCCATCATTGGCGCCCTCCTGACCTTTTGCGGCTTCAACATTGTCGCCTCAAAGGTGGCCAGC TTTGTCCTTGGCCTCTGCTTCCTCCTCACCCTGTGGTGGGGCAAGCGCGACTGGCTCACCGTCTTGACCGTTTTG CTCGCCGTTGGCCTGCTCGTTGCCTGCTGGTTCATTGTCCACGCCGAGGCGCTGCGCTTTGTCGTGCTCTTTATT GGCGTCATGTCCTCCCTCTATAGCGTCTGGGACATTTGCGACGATCTCATTCTGCGCAAGGTCAATTCGTCGGAT GCCAGTGTCTTTGCCAAGCGCTACGGCGGCTCCTCCCAGTGCTGGGGCGTCATTTGGTCCATTATTTCCATTCTC GTCATGGCCCTGGGCATTATCGCTGGCCTCGCTGCCTTTTCCCAGTCCTTTGAGCAGCAGCAGCAGGATTCGAAG CACTTTATTCCTACTTGA
Gene	>OphauB2\|5508 ATGCTCCAGGAGCAGCAGCAGCTCGTTGCGCGCAATCTCCAGCACCCGACGCGCACGCAGCAGGTGACGCTGGGC GTTATTGCTGGCTATGTTGTGGTGATTGCTATTTTGTGGAACGTGCCCTATCTTCGAATGGTGCTCTGGCCCTTC AAGGTGAGCAGAGGAGAAGACGGCAGCGCAAAATATCAGACAGCAGATCAGAGGACAAGACAGCAGAGCAAAACA TTAGAGAGCAGATGAGAGCAAAGAAACAAGCATCGTGGGGGAGCAAGACTTTTTGTAGTATTGCTAACCAACCGC CACGATGCCATCTAGATGCTCGTCATCGCCTTTCACGAATTCGGCCACGCTTCAACAGCCATGCTCACTGGCGGC CGCGTCAAGTCCATCAGCCTCGACCCCAACGAAGGCGGCGTCACCCATCTCCAGGGCGGCATCAGCGCCATCACC CTCCCCGCCGGCTACCTTGGCTCCTCCATCATTGGCGCCCTCCTGACCTTTTGCGGCTTCAACATTGTCGCCTCA AAGGTGGCCAGCTTTGTCCTTGGCCTCTGCTTCCTCCTCACCCTGTGGTGGGGCAAGCGCGACTGGCTCACCGTC TTGACCGTTTTGCTCGCCGTTGGCCTGCTCGTTGCCTGCTGGTTCATTGTCCACGCCGAGGCGCTGCGCTTTGTC GTGCTCTTTATTGGCGTCATGTCCTCCCTCTATAGCGTCTGGGACATTTGCGACGATCTCATTCTGCGCAAGGTC AATTCGTCGGATGCCAGTGTCTTTGCCAAGCGCTACGGCGGCTCCTCCCAGTGCTGGGGCGTCATTTGGTCCATT ATTTCCATTCTCGTCATGGCCCTGGGCATTATCGCTGGCCTCGCTGCCTTTTCCCAGTCCTTTGAGCAGCAGCAG CAGGATTCGAAGCACTTTATTCCTACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail