© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5450 |
| Gene name | |
| Location | Contig_42:40694..41612 |
| Strand | + |
| Gene length (bp) | 918 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00462 | Glutaredoxin | Glutaredoxin | 7.4E-11 | 174 | 236 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38068|GLRX7_YEAST | Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 | 158 | 269 | 1.0E-23 |
| sp|Q12438|GLRX6_YEAST | Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 | 159 | 271 | 1.0E-21 |
| sp|Q8LFQ6|GRXC4_ARATH | Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2 | 174 | 265 | 1.0E-16 |
| sp|Q0DAE4|GRXC8_ORYSJ | Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 | 165 | 265 | 1.0E-15 |
| sp|B7ZFT1|GLRX1_RHIID | Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 | 168 | 246 | 5.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38068|GLRX7_YEAST | Monothiol glutaredoxin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX7 PE=1 SV=1 | 158 | 269 | 1.0E-23 |
| sp|Q12438|GLRX6_YEAST | Monothiol glutaredoxin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX6 PE=1 SV=1 | 159 | 271 | 1.0E-21 |
| sp|Q8LFQ6|GRXC4_ARATH | Glutaredoxin-C4 OS=Arabidopsis thaliana GN=GRXC4 PE=2 SV=2 | 174 | 265 | 1.0E-16 |
| sp|Q0DAE4|GRXC8_ORYSJ | Glutaredoxin-C8 OS=Oryza sativa subsp. japonica GN=GRXC8 PE=2 SV=2 | 165 | 265 | 1.0E-15 |
| sp|B7ZFT1|GLRX1_RHIID | Glutaredoxin-1 OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GRX1 PE=2 SV=3 | 168 | 246 | 5.0E-14 |
| sp|Q9Y7N3|GLRX3_SCHPO | Monothiol glutaredoxin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx3 PE=3 SV=3 | 168 | 268 | 8.0E-13 |
| sp|Q8L8T2|GRXC1_ARATH | Glutaredoxin-C1 OS=Arabidopsis thaliana GN=GRXC1 PE=2 SV=2 | 168 | 247 | 9.0E-13 |
| sp|Q0J3L4|GRS10_ORYSJ | Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica GN=GRXS10 PE=2 SV=2 | 160 | 261 | 1.0E-12 |
| sp|Q9FVX1|GRXC3_ARATH | Glutaredoxin-C3 OS=Arabidopsis thaliana GN=GRXC3 PE=2 SV=1 | 166 | 245 | 1.0E-12 |
| sp|Q6H628|GRXS6_ORYSJ | Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica GN=GRXS6 PE=2 SV=1 | 174 | 260 | 3.0E-12 |
| sp|Q8LBS4|GRS12_ARATH | Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana GN=GRXS12 PE=1 SV=2 | 162 | 265 | 4.0E-12 |
| sp|P55143|GLRX_RICCO | Glutaredoxin OS=Ricinus communis PE=3 SV=1 | 174 | 254 | 1.0E-11 |
| sp|Q9FNE2|GRXC2_ARATH | Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1 | 161 | 264 | 2.0E-11 |
| sp|Q8GWS0|GRXC5_ARATH | Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana GN=GRXC5 PE=1 SV=1 | 160 | 264 | 2.0E-11 |
| sp|P55142|GRXC6_ORYSJ | Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2 | 172 | 254 | 2.0E-11 |
| sp|Q6K953|GRXC4_ORYSJ | Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXC4 PE=3 SV=1 | 168 | 248 | 8.0E-11 |
| sp|Q86VQ6|TRXR3_HUMAN | Thioredoxin reductase 3 OS=Homo sapiens GN=TXNRD3 PE=1 SV=4 | 135 | 244 | 2.0E-10 |
| sp|Q9UTI2|GLRX2_SCHPO | Glutaredoxin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx2 PE=3 SV=1 | 173 | 258 | 4.0E-10 |
| sp|Q19297|YZ73_CAEEL | Uncharacterized monothiol glutaredoxin F10D7.3 OS=Caenorhabditis elegans GN=F10D7.3 PE=3 SV=2 | 174 | 244 | 7.0E-10 |
| sp|Q9ZR41|GLRX_SOLLC | Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1 | 168 | 254 | 7.0E-10 |
| sp|P25373|GLRX1_YEAST | Glutaredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX1 PE=1 SV=1 | 154 | 245 | 1.0E-09 |
| sp|Q54GP8|GLRX_DICDI | Glutaredoxin OS=Dictyostelium discoideum GN=grxA PE=2 SV=1 | 164 | 254 | 2.0E-09 |
| sp|P17695|GLRX2_YEAST | Glutaredoxin-2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRX2 PE=1 SV=3 | 149 | 259 | 5.0E-09 |
| sp|O81187|GLRX_VERFO | Glutaredoxin OS=Vernicia fordii PE=3 SV=1 | 179 | 254 | 2.0E-07 |
| sp|Q9SA68|GRXS1_ARATH | Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana GN=GRXS1 PE=3 SV=1 | 163 | 259 | 3.0E-07 |
| sp|Q99MD6|TRXR3_MOUSE | Thioredoxin reductase 3 OS=Mus musculus GN=Txnrd3 PE=1 SV=3 | 174 | 243 | 3.0E-07 |
| sp|Q9LYC8|GRXS6_ARATH | Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana GN=GRXS6 PE=3 SV=1 | 163 | 259 | 7.0E-07 |
| sp|O36032|GLRX1_SCHPO | Glutaredoxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=grx1 PE=3 SV=1 | 174 | 256 | 1.0E-06 |
| sp|Q8JLF5|GLRX1_ECTVM | Glutaredoxin-1 OS=Ectromelia virus (strain Moscow) GN=EVM053 PE=1 SV=1 | 161 | 262 | 2.0E-06 |
| sp|Q9NS18|GLRX2_HUMAN | Glutaredoxin-2, mitochondrial OS=Homo sapiens GN=GLRX2 PE=1 SV=1 | 174 | 241 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0097573 | glutathione oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0015035 | protein-disulfide reductase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0015036 | disulfide oxidoreductase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0016491 | oxidoreductase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5450 MPSPRRLRLVFVATLVAVVFILIYTSNLQDRHPRDTRSFQDFYQKTMHGMSKQQQAVFDTSTGATAGRIPADKDA DGDVDEDDRRVGEMTKQRLRAAEQMAKDKANEKALRPDPPSQVVGMGSSAEGQERKAKAKAVAEAPAPAESKSNA PPQVSQEELKAEQELNAILKRAPIVIFSKTYCPYSKHAKDILLEKYSIVPAPYVVELDQHPQGKALQTQLSRATS RSTVPNIMVAGISIGGNDEVVDLVNRDQLASKIRNIAGKQVEIKERFAAASDKGKKRSV* |
| Coding | >OphauB2|5450 ATGCCATCGCCACGGCGCCTGCGCCTCGTTTTCGTCGCGACGCTCGTCGCCGTCGTCTTCATACTTATCTACACG AGCAATCTCCAGGACCGCCACCCACGCGACACGCGTTCCTTTCAAGACTTTTACCAAAAGACGATGCACGGCATG AGCAAGCAACAGCAGGCTGTTTTCGACACAAGTACGGGTGCCACAGCAGGCCGAATCCCTGCCGACAAGGACGCC GATGGCGATGTCGACGAGGACGACCGCCGTGTGGGAGAAATGACCAAGCAACGCTTGCGCGCCGCCGAGCAAATG GCAAAGGACAAGGCCAATGAAAAGGCGCTTCGTCCTGATCCTCCCAGCCAGGTAGTGGGCATGGGGAGCTCGGCC GAGGGCCAGGAGAGAAAGGCCAAGGCCAAGGCGGTCGCAGAGGCGCCCGCGCCAGCCGAGTCCAAGAGTAATGCA CCTCCCCAAGTGAGCCAGGAGGAGCTCAAGGCCGAACAAGAGCTCAATGCCATCCTCAAAAGGGCGCCTATCGTC ATCTTTTCCAAGACCTACTGCCCCTATTCAAAGCACGCCAAAGACATCCTCTTGGAAAAGTACTCAATCGTTCCT GCTCCCTACGTCGTTGAGCTGGACCAGCATCCCCAGGGCAAGGCTCTACAAACCCAGCTCTCGAGAGCCACCAGT CGAAGCACTGTGCCAAATATTATGGTGGCAGGCATCAGTATTGGCGGCAACGATGAAGTTGTCGATCTAGTCAAT CGTGACCAGCTTGCGTCCAAGATTCGTAATATTGCTGGCAAGCAGGTCGAGATCAAAGAGCGCTTCGCTGCTGCC AGCGACAAAGGGAAAAAACGCAGTGTTTAG |
| Transcript | >OphauB2|5450 ATGCCATCGCCACGGCGCCTGCGCCTCGTTTTCGTCGCGACGCTCGTCGCCGTCGTCTTCATACTTATCTACACG AGCAATCTCCAGGACCGCCACCCACGCGACACGCGTTCCTTTCAAGACTTTTACCAAAAGACGATGCACGGCATG AGCAAGCAACAGCAGGCTGTTTTCGACACAAGTACGGGTGCCACAGCAGGCCGAATCCCTGCCGACAAGGACGCC GATGGCGATGTCGACGAGGACGACCGCCGTGTGGGAGAAATGACCAAGCAACGCTTGCGCGCCGCCGAGCAAATG GCAAAGGACAAGGCCAATGAAAAGGCGCTTCGTCCTGATCCTCCCAGCCAGGTAGTGGGCATGGGGAGCTCGGCC GAGGGCCAGGAGAGAAAGGCCAAGGCCAAGGCGGTCGCAGAGGCGCCCGCGCCAGCCGAGTCCAAGAGTAATGCA CCTCCCCAAGTGAGCCAGGAGGAGCTCAAGGCCGAACAAGAGCTCAATGCCATCCTCAAAAGGGCGCCTATCGTC ATCTTTTCCAAGACCTACTGCCCCTATTCAAAGCACGCCAAAGACATCCTCTTGGAAAAGTACTCAATCGTTCCT GCTCCCTACGTCGTTGAGCTGGACCAGCATCCCCAGGGCAAGGCTCTACAAACCCAGCTCTCGAGAGCCACCAGT CGAAGCACTGTGCCAAATATTATGGTGGCAGGCATCAGTATTGGCGGCAACGATGAAGTTGTCGATCTAGTCAAT CGTGACCAGCTTGCGTCCAAGATTCGTAATATTGCTGGCAAGCAGGTCGAGATCAAAGAGCGCTTCGCTGCTGCC AGCGACAAAGGGAAAAAACGCAGTGTTTAG |
| Gene | >OphauB2|5450 ATGCCATCGCCACGGCGCCTGCGCCTCGTTTTCGTCGCGACGCTCGTCGCCGTCGTCTTCATACTTATCTACACG AGCAATCTCCAGGACCGCCACCCACGCGACACGCGTTCCTTTCAAGACTTTTACCAAAAGACGATGCACGGCATG AGCAAGCAACAGCAGGCTGTTTTCGACACAAGTACGGGTGCCACAGCAGGCCGAATCCCTGCCGACAAGGACGCC GATGGCGATGTCGACGAGGACGACCGCCGTGTGGGAGAAATGACCAAGCAACGCTTGCGCGCCGCCGAGCAAATG GCAAAGGACAAGGCCAATGAAAAGGCGCTTCGTCCTGATCCTCCCAGCCAGGTAGTGGGCATGGGGAGCTCGGCC GAGGGCCAGGAGAGAAAGGCCAAGGCCAAGGCGGTCGCAGAGGCGCCCGCGCCAGCCGAGTCCAAGAGTAATGCA CCTCCCCAAGTGAGCCAGGAGGAGCTCAAGGCCGAACAAGAGCTCAATGCCATCCTCAAAAGGGCGCCTAGTAAG CTCCATAGCCTTGCCCAAATGCTCAAACGACTCAAAAGATTAACGTGGCGATTGCTAGTCGTCATCTTTTCCAAG ACCTACTGCCCCTATTCAAAGCACGCCAAAGACATCCTCTTGGAAAAGTACTCAATCGTTCCTGCTCCCTACGTC GTTGAGCTGGACCAGCATCCCCAGGGCAAGGCTCTACAAACCCAGCTCTCGAGAGCCACCAGTCGAAGCACTGTG CCAAATATTATGGTGGCAGGCATCAGTATTGGCGGCAACGATGAAGTTGTCGATCTAGTCAATCGTGACCAGCTT GCGTCCAAGATTCGTAATATTGCTGGCAAGCAGGTCGAGATCAAAGAGCGCTTCGCTGCTGCCAGCGACAAAGGG AAAAAACGCAGTGTTTAG |