© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5440 |
| Gene name | |
| Location | Contig_42:10149..12146 |
| Strand | - |
| Gene length (bp) | 1997 |
| Transcript length (bp) | 1716 |
| Coding sequence length (bp) | 1716 |
| Protein length (aa) | 572 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 1.3E-21 | 281 | 474 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 279 | 564 | 3.0E-49 |
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 265 | 567 | 2.0E-47 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 259 | 566 | 3.0E-47 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 279 | 564 | 4.0E-46 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 279 | 564 | 1.0E-44 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 279 | 564 | 3.0E-49 |
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 265 | 567 | 2.0E-47 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 259 | 566 | 3.0E-47 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 279 | 564 | 4.0E-46 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 279 | 564 | 1.0E-44 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 279 | 567 | 2.0E-43 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 255 | 564 | 8.0E-42 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 279 | 564 | 2.0E-41 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 236 | 564 | 3.0E-35 |
| sp|Q08970|MMT2_YEAST | Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=3 SV=2 | 273 | 465 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 280 | 302 | 22 |
| 2 | 348 | 370 | 22 |
| 3 | 385 | 407 | 22 |
| 4 | 428 | 447 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5440 MSSPSPRGRPIRRRPSLLSLDDGHHYPLSRTGALASLIRSRSQQSFTGSWPPSAHRHYFADDEETAAWARHEDED IERLLRDETRLSQILKGPQARSMNLLGKSNPRYRWDRYWKSHDELHVMKKSLRKYYKRTNDLIQQYMYIDCLLDS SIPHDLLNEYSVELEASAFRPIDVPATISEEPSGAQSLSASLDQQHAPTSYGSINAPPQAENGSLPTLPAKRTPK DIFRSSESLPLLQHHDDDVAEPVHVSPSGEEGPRPHLPWLEDAEIDSDDPIVTLAIWINLVANVFLLAGKIAVII SVPSMSVLASLVDATLDFLSTAIVWTTTRLISSGQKDQYRYPVGRRRLEPVGVLVFSVIMVTSFVQVGLQCIQRL ASPEHHILQLGAPAIIIMASTILIKGGCWIWCRLVRNSSVRALAEDAKTDVIFNVGSILFPIVGYYGQIWWLDAT GGLLLSLVVIFTWSQTSAHHVRNLTGFSAQPDERNLLLYLTMRFATAIRQIQNLRAYHAGDKLFVEVDIVLSAIT PLKDSHDLSEVLTYFLESVPIVDRAFVHVDYTSYNAPTHMLKQSSS* |
| Coding | >OphauB2|5440 ATGAGCTCCCCCAGTCCCCGAGGCCGCCCCATCCGCCGCAGGCCGTCGCTGCTCTCTCTCGACGATGGCCATCAC TACCCCTTGTCACGGACCGGAGCCCTCGCTTCCTTGATCCGCAGTCGCTCCCAGCAAAGCTTTACAGGCTCCTGG CCGCCCTCGGCCCACCGCCACTATTTTGCCGACGATGAGGAGACGGCCGCCTGGGCGCGCCACGAGGACGAGGAC ATTGAGAGGCTGCTGAGGGACGAGACGCGCCTCAGCCAGATTCTCAAGGGCCCTCAGGCCCGGAGCATGAACCTC CTGGGCAAGAGCAACCCCCGCTATCGCTGGGACCGCTACTGGAAGAGCCATGACGAGCTTCATGTCATGAAGAAA TCCCTCCGCAAGTACTACAAGCGCACCAACGATCTTATCCAGCAGTACATGTACATTGACTGCCTGCTCGACTCG TCCATTCCCCACGACCTGCTCAACGAGTACTCGGTTGAACTCGAGGCTTCGGCCTTTCGACCCATCGACGTGCCC GCCACCATTAGCGAGGAGCCCAGCGGAGCCCAGTCGCTGTCAGCCTCTCTGGATCAACAGCACGCGCCCACCTCG TATGGCTCCATCAATGCGCCGCCTCAAGCCGAAAACGGCTCCTTGCCAACACTGCCTGCCAAACGCACTCCCAAG GACATCTTTCGCTCCTCAGAGAGTCTGCCCCTGCTACAGCACCACGACGACGACGTTGCCGAGCCTGTCCATGTG TCTCCATCAGGCGAGGAAGGTCCCAGGCCCCATTTGCCCTGGCTCGAAGATGCCGAGATTGACAGTGACGACCCC ATTGTCACGCTGGCCATTTGGATCAACCTCGTGGCCAATGTCTTTCTCCTAGCAGGCAAGATTGCCGTCATCATC TCGGTCCCATCCATGTCTGTCCTGGCCAGTCTTGTCGATGCCACTCTTGATTTTCTTAGCACCGCCATTGTCTGG ACTACGACGCGACTCATTTCCAGCGGCCAAAAAGACCAGTATCGCTACCCGGTCGGACGGCGTCGATTGGAACCT GTTGGCGTCCTAGTCTTCTCAGTCATCATGGTTACCTCGTTTGTTCAGGTGGGTCTACAATGTATCCAGCGCCTA GCCAGTCCGGAGCACCACATCTTGCAGCTAGGTGCTCCTGCCATCATCATCATGGCTAGCACCATCCTCATCAAG GGGGGCTGCTGGATCTGGTGCCGCCTGGTTCGGAATTCCAGTGTCCGCGCCCTAGCCGAAGACGCCAAGACGGAT GTCATTTTCAACGTGGGATCGATTCTCTTTCCCATCGTCGGCTACTATGGCCAAATATGGTGGCTCGATGCCACT GGCGGTCTACTTCTCTCACTCGTTGTCATCTTTACGTGGAGCCAAACGTCGGCCCATCATGTGCGCAATCTGACG GGCTTCTCGGCCCAGCCGGACGAGCGTAACCTGCTGCTCTACCTGACGATGCGCTTCGCCACCGCCATTCGCCAA ATCCAAAACCTCCGTGCATACCACGCCGGCGACAAGCTCTTTGTCGAAGTCGACATTGTTCTCTCGGCCATTACG CCCCTCAAGGACAGCCATGATTTGAGCGAGGTTCTCACCTACTTTCTCGAGTCGGTGCCCATTGTCGACCGTGCC TTTGTCCACGTTGACTATACGAGCTACAATGCTCCCACGCACATGCTCAAGCAGTCATCGAGTTAG |
| Transcript | >OphauB2|5440 ATGAGCTCCCCCAGTCCCCGAGGCCGCCCCATCCGCCGCAGGCCGTCGCTGCTCTCTCTCGACGATGGCCATCAC TACCCCTTGTCACGGACCGGAGCCCTCGCTTCCTTGATCCGCAGTCGCTCCCAGCAAAGCTTTACAGGCTCCTGG CCGCCCTCGGCCCACCGCCACTATTTTGCCGACGATGAGGAGACGGCCGCCTGGGCGCGCCACGAGGACGAGGAC ATTGAGAGGCTGCTGAGGGACGAGACGCGCCTCAGCCAGATTCTCAAGGGCCCTCAGGCCCGGAGCATGAACCTC CTGGGCAAGAGCAACCCCCGCTATCGCTGGGACCGCTACTGGAAGAGCCATGACGAGCTTCATGTCATGAAGAAA TCCCTCCGCAAGTACTACAAGCGCACCAACGATCTTATCCAGCAGTACATGTACATTGACTGCCTGCTCGACTCG TCCATTCCCCACGACCTGCTCAACGAGTACTCGGTTGAACTCGAGGCTTCGGCCTTTCGACCCATCGACGTGCCC GCCACCATTAGCGAGGAGCCCAGCGGAGCCCAGTCGCTGTCAGCCTCTCTGGATCAACAGCACGCGCCCACCTCG TATGGCTCCATCAATGCGCCGCCTCAAGCCGAAAACGGCTCCTTGCCAACACTGCCTGCCAAACGCACTCCCAAG GACATCTTTCGCTCCTCAGAGAGTCTGCCCCTGCTACAGCACCACGACGACGACGTTGCCGAGCCTGTCCATGTG TCTCCATCAGGCGAGGAAGGTCCCAGGCCCCATTTGCCCTGGCTCGAAGATGCCGAGATTGACAGTGACGACCCC ATTGTCACGCTGGCCATTTGGATCAACCTCGTGGCCAATGTCTTTCTCCTAGCAGGCAAGATTGCCGTCATCATC TCGGTCCCATCCATGTCTGTCCTGGCCAGTCTTGTCGATGCCACTCTTGATTTTCTTAGCACCGCCATTGTCTGG ACTACGACGCGACTCATTTCCAGCGGCCAAAAAGACCAGTATCGCTACCCGGTCGGACGGCGTCGATTGGAACCT GTTGGCGTCCTAGTCTTCTCAGTCATCATGGTTACCTCGTTTGTTCAGGTGGGTCTACAATGTATCCAGCGCCTA GCCAGTCCGGAGCACCACATCTTGCAGCTAGGTGCTCCTGCCATCATCATCATGGCTAGCACCATCCTCATCAAG GGGGGCTGCTGGATCTGGTGCCGCCTGGTTCGGAATTCCAGTGTCCGCGCCCTAGCCGAAGACGCCAAGACGGAT GTCATTTTCAACGTGGGATCGATTCTCTTTCCCATCGTCGGCTACTATGGCCAAATATGGTGGCTCGATGCCACT GGCGGTCTACTTCTCTCACTCGTTGTCATCTTTACGTGGAGCCAAACGTCGGCCCATCATGTGCGCAATCTGACG GGCTTCTCGGCCCAGCCGGACGAGCGTAACCTGCTGCTCTACCTGACGATGCGCTTCGCCACCGCCATTCGCCAA ATCCAAAACCTCCGTGCATACCACGCCGGCGACAAGCTCTTTGTCGAAGTCGACATTGTTCTCTCGGCCATTACG CCCCTCAAGGACAGCCATGATTTGAGCGAGGTTCTCACCTACTTTCTCGAGTCGGTGCCCATTGTCGACCGTGCC TTTGTCCACGTTGACTATACGAGCTACAATGCTCCCACGCACATGCTCAAGCAGTCATCGAGTTAG |
| Gene | >OphauB2|5440 ATGAGCTCCCCCAGTCCCCGAGGCCGCCCCATCCGCCGCAGGCCGTCGCTGCTCTCTCTCGACGATGGCCATCAC TACCCCTTGTCACGGACCGGAGCCCTCGCTTCCTTGATCCGCAGTCGCTCCCAGCAAAGCTTTACAGGCTCCTGG CCGCCCTCGGCCCACCGCCACTATTTTGCCGACGATGAGGAGACGGCCGCCTGGGCGCGCCACGAGGACGAGGAC ATTGAGAGGCTGCTGAGGGACGAGACGCGCCTCAGCCAGATTCTCAAGGGCCCTCAGGCCCGGAGCATGAACCTC CTGGGCAAGAGCAACCCCCGCTATCGCTGGGACCGCTACTGGAAGAGCCATGACGAGCTTCATGTCATGAAGAAA TCCCTGTGAGAGCGTCTTCTGGCCCGTCTTGTCACTCTTGCACTCTGACGCCTCCAAGCCGCAAGTACTACAAGC GCACCAACGATCTTATCCAGCAGTACATGTACATTGACTGCCTGCTCGACTCGTCCATTCCCCACGACCTGCTCA ACGAGTACTCGGTTGAACTCGAGGCTTCGGCCTTTCGACCCATCGACGTGCCCGCCACCATTAGCGAGGAGCCCA GCGGAGCCCAGTCGCTGTCAGCCTCTCTGGATCAACAGCACGCGCCCACCTCGTATGGCTCCATCAATGCGCCGC CTCAAGCCGAAAACGGCTCCTTGCCAACACTGCCTGCCAAACGCACTCCCAAGGACATCTTTCGCTCCTCAGAGA GTCTGCCCCTGCTACAGCACCACGACGACGACGTTGCCGAGCCTGTCCATGTGTCTCCATCAGGCGAGGAAGGTC CCAGGCCCCATTTGCCCTGGCTCGAAGATGCCGAGATTGACAGTGACGACCCCATTGTCACGCTGGCCATTTGGA TCAACCTCGTGGCCAATGTCTTTCTCCTAGCAGGCAAGATTGCCGTCATCATCTCGGTCCCATCCATGTCTGTCC TGGCCAGTCTTGTCGATGCCACTCTTGATTTTCTTAGCACCGCCATTGTCTGGACTACGACGCGACTCATTTCCA GCGGCCAAAAAGACCAGTATCGCTACCCGGTCGGACGGCGTCGGTGAGTTGCTCTTGGCAGCCTTGCCACGGTCC TGACAAGTCGACTGATGGACCTCATGTCTCCAAGATTGGAACCTGTTGGCGTCCTAGTCTTCTCAGTCATCATGG TTACCTCGTTTGTTCAGGTGGGTCTACAATGTATCCAGCGCCTAGCCAGTCCGGAGCACCACATCTTGCAGCTAG GTGCTCCTGCCATCATCATCATGGCTAGCACCATCCTCATCAAGGGGGGCTGCTGGATCTGGTGCCGCCTGGTTC GGAATTCCAGTGTCCGCGCCCTGTGAGTAGCCTTTGCTCCAATGCATGCTAGCTGGGTCACTCTCTCACGTATCT TTCGCTTCCAGAGCCGAAGACGCCAAGACGGATGTCATTTTCAACGTGGGATCGATTCTCTTTCCCATCGGTACG TGTGAAAATTTTGCCCAATCCAAATATTCCCCCTTTGTTTTTTTTTTCCCTTGGCCGCCTGGCTCCCGCTCACAG GATGCATGTGCTACGCAGTCGGCTACTATGGCCAAATATGGTGGCTCGATGCCACTGGCGGTCTACTTCTCTCAC TCGTTGTCATCTTTACGTGGAGCCAAACGTCGGCCCATCATGTGCGCAATCTGACGGGCTTCTCGGCCCAGCCGG ACGAGCGTAACCTGCTGCTCTACCTGACGATGCGCTTCGCCACCGCCATTCGCCAAATCCAAAACCTCCGTGCAT ACCACGCCGGCGACAAGCTCTTTGTCGAAGTCGACATTGTTCTCTCGGCCATTACGCCCCTCAAGGACAGCCATG ATTTGAGCGAGGTTCTCACCTACTTTCTCGAGTCGGTGCCCATTGTCGACCGTGCCTTTGTCCACGTTGACTATA CGAGCTACAATGCTCCCACGCACATGCTCAAGCAGTCATCGAGTTAG |