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| Protein ID | OphauB2|5404 |
| Gene name | |
| Location | Contig_41:42258..44235 |
| Strand | + |
| Gene length (bp) | 1977 |
| Transcript length (bp) | 1854 |
| Coding sequence length (bp) | 1854 |
| Protein length (aa) | 618 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08783 | DWNN | DWNN domain | 8.0E-32 | 5 | 78 |
| PF13696 | zf-CCHC_2 | Zinc knuckle | 1.7E-08 | 175 | 195 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94264|YORF_SCHPO | Uncharacterized RING finger protein P8B7.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.15c PE=3 SV=1 | 1 | 354 | 3.0E-103 |
| sp|P35728|MPE1_YEAST | Protein MPE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPE1 PE=1 SV=1 | 1 | 357 | 2.0E-91 |
| sp|Q7Z6E9|RBBP6_HUMAN | E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens GN=RBBP6 PE=1 SV=1 | 3 | 339 | 9.0E-35 |
| sp|P97868|RBBP6_MOUSE | E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus GN=Rbbp6 PE=1 SV=5 | 3 | 339 | 2.0E-33 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0046872 | metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043169 | cation binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 524 | 546 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5404 MSSSVFFKFKSQKEPTRVEFDGTGISVFELKREIISKSGLGDGTDFDLHIYTDDNSEEYDDDTTIVPRSTTVIAR RQPAIKPGAGRAARYVSGKMPASAKNASRKEQASRANAAKSGSNAINQMNEAMTEEEKMEAMFAAQSEQWSAQQE ELSHNAPAYKPGAKRPTNVPDHDPPNGYICYRCGNKGHWIQLCPTNDDPDFDNRPRVKRTTGIPRSFLQKIDKSA ILAQTDGDETKRPSGIMVNADGDFVIAEPDKASWEQFQAKTKSSNKPTDAQATENKEVQDRGLECPIDKKMLIEP MKTPCCNKTFCNDCITNALIESDFVCPACQTEGVLIDDLTPDEDCAKNIQEYLKKKETCADSPRPVSKSESDGKE GENAELGKVTQNESELKDDKTTKKSKSPSPGPGNKSPAQEPKKSWPGTTTAPDKPSTDEAKAIEVKSTKRPAEDV LENPKIPKAPKAMQSQQAANVMPNLNDMGNLNSMGMDNMMFGGCMGMMPPNMMGMQQNMGMNMGMNMGMMGMPMM GMPGFGGINVGGFGALHSAWGINDMNPMNGMGMQNQQMNGPMSNGMGPGFFNGSGLMQTNGNEDDAYFRKPVNPH RHQNKQRRVRPSDYREL* |
| Coding | >OphauB2|5404 ATGTCGTCTTCAGTCTTTTTCAAATTTAAATCGCAAAAGGAACCGACGCGTGTCGAGTTTGACGGTACTGGCATA TCCGTTTTTGAACTGAAGCGCGAAATCATCAGCAAGAGCGGCCTTGGTGACGGTACTGATTTTGATCTTCACATT TACACTGACGACAATAGCGAGGAGTATGATGATGATACCACCATTGTCCCTCGCTCCACCACCGTCATTGCACGG CGCCAACCTGCCATCAAGCCCGGTGCTGGGCGTGCTGCGCGGTATGTTTCGGGCAAAATGCCCGCATCAGCAAAG AATGCCAGTCGCAAGGAGCAGGCATCGCGTGCAAACGCTGCCAAGTCTGGATCAAACGCCATTAACCAAATGAAT GAAGCAATGACTGAAGAAGAAAAGATGGAGGCCATGTTTGCTGCCCAGAGTGAACAGTGGTCTGCCCAACAGGAA GAATTATCACATAATGCACCAGCATATAAACCTGGTGCCAAGAGACCGACCAATGTCCCTGACCATGACCCCCCC AACGGCTACATTTGCTATCGATGTGGCAACAAAGGCCATTGGATTCAGCTCTGCCCCACAAACGATGATCCCGAC TTTGACAATAGACCTCGGGTTAAGCGCACCACTGGCATTCCGCGCTCATTTCTTCAAAAGATTGACAAGTCGGCA ATCCTGGCGCAGACGGACGGAGACGAGACTAAGCGCCCCTCTGGAATCATGGTCAACGCGGATGGCGATTTTGTC ATTGCTGAGCCTGACAAGGCTTCTTGGGAACAGTTTCAAGCAAAAACCAAGTCATCAAACAAGCCAACGGATGCC CAGGCCACAGAGAACAAGGAGGTACAAGATCGCGGCCTAGAGTGCCCGATTGACAAGAAAATGTTGATAGAGCCA ATGAAGACACCCTGCTGCAACAAGACGTTTTGTAATGATTGCATAACAAATGCTCTCATTGAAAGCGATTTTGTC TGTCCTGCCTGCCAGACTGAAGGTGTCTTGATAGACGATTTGACGCCCGATGAAGATTGCGCAAAAAACATACAA GAGTACTTAAAGAAGAAGGAGACTTGTGCTGATTCGCCTAGGCCAGTATCAAAATCTGAATCTGACGGCAAGGAA GGGGAAAACGCCGAGCTCGGCAAAGTAACACAAAACGAGTCTGAATTAAAAGATGACAAGACGACCAAGAAGTCC AAGTCGCCATCGCCAGGACCAGGCAACAAGTCGCCTGCCCAAGAGCCCAAGAAGTCATGGCCAGGTACTACGACA GCTCCTGACAAGCCCAGTACGGATGAAGCAAAAGCGATAGAGGTCAAGTCGACTAAACGACCAGCAGAGGATGTG CTTGAGAACCCAAAGATACCCAAGGCTCCCAAGGCTATGCAGAGCCAGCAAGCGGCGAATGTAATGCCCAACCTA AATGACATGGGCAACCTGAACAGCATGGGAATGGACAACATGATGTTTGGCGGCTGCATGGGTATGATGCCCCCC AACATGATGGGTATGCAGCAAAACATGGGCATGAACATGGGCATGAATATGGGCATGATGGGAATGCCCATGATG GGAATGCCTGGGTTTGGTGGTATCAATGTCGGAGGATTCGGAGCTCTGCATAGTGCCTGGGGTATTAACGACATG AATCCCATGAATGGCATGGGCATGCAAAATCAACAAATGAATGGACCCATGAGCAACGGAATGGGACCTGGCTTC TTTAATGGAAGCGGACTAATGCAAACAAACGGCAATGAAGACGACGCTTACTTTCGGAAACCCGTTAATCCCCAT CGTCATCAGAATAAGCAACGAAGAGTACGACCAAGTGACTATCGCGAGCTGTAA |
| Transcript | >OphauB2|5404 ATGTCGTCTTCAGTCTTTTTCAAATTTAAATCGCAAAAGGAACCGACGCGTGTCGAGTTTGACGGTACTGGCATA TCCGTTTTTGAACTGAAGCGCGAAATCATCAGCAAGAGCGGCCTTGGTGACGGTACTGATTTTGATCTTCACATT TACACTGACGACAATAGCGAGGAGTATGATGATGATACCACCATTGTCCCTCGCTCCACCACCGTCATTGCACGG CGCCAACCTGCCATCAAGCCCGGTGCTGGGCGTGCTGCGCGGTATGTTTCGGGCAAAATGCCCGCATCAGCAAAG AATGCCAGTCGCAAGGAGCAGGCATCGCGTGCAAACGCTGCCAAGTCTGGATCAAACGCCATTAACCAAATGAAT GAAGCAATGACTGAAGAAGAAAAGATGGAGGCCATGTTTGCTGCCCAGAGTGAACAGTGGTCTGCCCAACAGGAA GAATTATCACATAATGCACCAGCATATAAACCTGGTGCCAAGAGACCGACCAATGTCCCTGACCATGACCCCCCC AACGGCTACATTTGCTATCGATGTGGCAACAAAGGCCATTGGATTCAGCTCTGCCCCACAAACGATGATCCCGAC TTTGACAATAGACCTCGGGTTAAGCGCACCACTGGCATTCCGCGCTCATTTCTTCAAAAGATTGACAAGTCGGCA ATCCTGGCGCAGACGGACGGAGACGAGACTAAGCGCCCCTCTGGAATCATGGTCAACGCGGATGGCGATTTTGTC ATTGCTGAGCCTGACAAGGCTTCTTGGGAACAGTTTCAAGCAAAAACCAAGTCATCAAACAAGCCAACGGATGCC CAGGCCACAGAGAACAAGGAGGTACAAGATCGCGGCCTAGAGTGCCCGATTGACAAGAAAATGTTGATAGAGCCA ATGAAGACACCCTGCTGCAACAAGACGTTTTGTAATGATTGCATAACAAATGCTCTCATTGAAAGCGATTTTGTC TGTCCTGCCTGCCAGACTGAAGGTGTCTTGATAGACGATTTGACGCCCGATGAAGATTGCGCAAAAAACATACAA GAGTACTTAAAGAAGAAGGAGACTTGTGCTGATTCGCCTAGGCCAGTATCAAAATCTGAATCTGACGGCAAGGAA GGGGAAAACGCCGAGCTCGGCAAAGTAACACAAAACGAGTCTGAATTAAAAGATGACAAGACGACCAAGAAGTCC AAGTCGCCATCGCCAGGACCAGGCAACAAGTCGCCTGCCCAAGAGCCCAAGAAGTCATGGCCAGGTACTACGACA GCTCCTGACAAGCCCAGTACGGATGAAGCAAAAGCGATAGAGGTCAAGTCGACTAAACGACCAGCAGAGGATGTG CTTGAGAACCCAAAGATACCCAAGGCTCCCAAGGCTATGCAGAGCCAGCAAGCGGCGAATGTAATGCCCAACCTA AATGACATGGGCAACCTGAACAGCATGGGAATGGACAACATGATGTTTGGCGGCTGCATGGGTATGATGCCCCCC AACATGATGGGTATGCAGCAAAACATGGGCATGAACATGGGCATGAATATGGGCATGATGGGAATGCCCATGATG GGAATGCCTGGGTTTGGTGGTATCAATGTCGGAGGATTCGGAGCTCTGCATAGTGCCTGGGGTATTAACGACATG AATCCCATGAATGGCATGGGCATGCAAAATCAACAAATGAATGGACCCATGAGCAACGGAATGGGACCTGGCTTC TTTAATGGAAGCGGACTAATGCAAACAAACGGCAATGAAGACGACGCTTACTTTCGGAAACCCGTTAATCCCCAT CGTCATCAGAATAAGCAACGAAGAGTACGACCAAGTGACTATCGCGAGCTGTAA |
| Gene | >OphauB2|5404 ATGTCGTCTTCAGTCTTTTTCAAATTTAAATCGCAAAAGGAACCGACGCGTGTCGAGTTTGACGGTACTGGCATA TCCGTTTTTGAACTGAAGCGCGAAATCATCAGCAAGAGCGGCCTTGGTGACGGTACTGATTTTGATCTTCACATT TACACTGACGACAATAGCGAGGGTAAGTACAAAACCATGAATGCCTGTTGCTGTTTTTACTCATGATTGACGGCC CCTTGTATAGAGTATGATGATGATACCACCATTGTCCCTCGCTCCACCACCGTCATTGCACGGCGCCAACCTGCC ATCAAGCCCGGTGCTGGGCGTGCTGCGCGGTATGTTTCGGGCAAAATGCCCGCATCAGCAAAGAATGCCAGTCGC AAGGAGCAGGCATCGCGTGCAAACGCTGCCAAGTCTGGATCAAACGCCATTAACCAAATGAATGAAGCAATGACT GAAGAAGAAAAGATGGAGGCCATGTTTGCTGCCCAGAGTGAACAGTGGTCTGCCCAACAGGAAGAATTATCACAG TAGGTTGCCATGACTGAAAGCCATGACTTCACTTTGGCTGACTGACCATGCTGTAATAGTAATGCACCAGCATAT AAACCTGGTGCCAAGAGACCGACCAATGTCCCTGACCATGACCCCCCCAACGGCTACATTTGCTATCGATGTGGC AACAAAGGCCATTGGATTCAGCTCTGCCCCACAAACGATGATCCCGACTTTGACAATAGACCTCGGGTTAAGCGC ACCACTGGCATTCCGCGCTCATTTCTTCAAAAGATTGACAAGTCGGCAATCCTGGCGCAGACGGACGGAGACGAG ACTAAGCGCCCCTCTGGAATCATGGTCAACGCGGATGGCGATTTTGTCATTGCTGAGCCTGACAAGGCTTCTTGG GAACAGTTTCAAGCAAAAACCAAGTCATCAAACAAGCCAACGGATGCCCAGGCCACAGAGAACAAGGAGGTACAA GATCGCGGCCTAGAGTGCCCGATTGACAAGAAAATGTTGATAGAGCCAATGAAGACACCCTGCTGCAACAAGACG TTTTGTAATGATTGCATAACAAATGCTCTCATTGAAAGCGATTTTGTCTGTCCTGCCTGCCAGACTGAAGGTGTC TTGATAGACGATTTGACGCCCGATGAAGATTGCGCAAAAAACATACAAGAGTACTTAAAGAAGAAGGAGACTTGT GCTGATTCGCCTAGGCCAGTATCAAAATCTGAATCTGACGGCAAGGAAGGGGAAAACGCCGAGCTCGGCAAAGTA ACACAAAACGAGTCTGAATTAAAAGATGACAAGACGACCAAGAAGTCCAAGTCGCCATCGCCAGGACCAGGCAAC AAGTCGCCTGCCCAAGAGCCCAAGAAGTCATGGCCAGGTACTACGACAGCTCCTGACAAGCCCAGTACGGATGAA GCAAAAGCGATAGAGGTCAAGTCGACTAAACGACCAGCAGAGGATGTGCTTGAGAACCCAAAGATACCCAAGGCT CCCAAGGCTATGCAGAGCCAGCAAGCGGCGAATGTAATGCCCAACCTAAATGACATGGGCAACCTGAACAGCATG GGAATGGACAACATGATGTTTGGCGGCTGCATGGGTATGATGCCCCCCAACATGATGGGTATGCAGCAAAACATG GGCATGAACATGGGCATGAATATGGGCATGATGGGAATGCCCATGATGGGAATGCCTGGGTTTGGTGGTATCAAT GTCGGAGGATTCGGAGCTCTGCATAGTGCCTGGGGTATTAACGACATGAATCCCATGAATGGCATGGGCATGCAA AATCAACAAATGAATGGACCCATGAGCAACGGAATGGGACCTGGCTTCTTTAATGGAAGCGGACTAATGCAAACA AACGGCAATGAAGACGACGCTTACTTTCGGAAACCCGTTAATCCCCATCGTCATCAGAATAAGCAACGAAGAGTA CGACCAAGTGACTATCGCGAGCTGTAA |