© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5352 |
| Gene name | |
| Location | Contig_40:59875..61728 |
| Strand | - |
| Gene length (bp) | 1853 |
| Transcript length (bp) | 1725 |
| Coding sequence length (bp) | 1725 |
| Protein length (aa) | 575 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.7E-24 | 79 | 457 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.3E-21 | 92 | 553 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C101|YKT8_SCHPO | Uncharacterized MFS-type transporter PB1E7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.08c PE=1 SV=1 | 53 | 521 | 2.0E-77 |
| sp|Q2XWK0|SVOP_XENLA | Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1 | 56 | 553 | 1.0E-24 |
| sp|Q5R5T8|SVOP_PONAB | Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1 | 56 | 553 | 3.0E-24 |
| sp|P30638|SVOP_CAEEL | Putative transporter svop-1 OS=Caenorhabditis elegans GN=svop-1 PE=3 SV=5 | 52 | 520 | 4.0E-24 |
| sp|Q8N4V2|SVOP_HUMAN | Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1 | 56 | 553 | 5.0E-24 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C101|YKT8_SCHPO | Uncharacterized MFS-type transporter PB1E7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.08c PE=1 SV=1 | 53 | 521 | 2.0E-77 |
| sp|Q2XWK0|SVOP_XENLA | Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1 | 56 | 553 | 1.0E-24 |
| sp|Q5R5T8|SVOP_PONAB | Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1 | 56 | 553 | 3.0E-24 |
| sp|P30638|SVOP_CAEEL | Putative transporter svop-1 OS=Caenorhabditis elegans GN=svop-1 PE=3 SV=5 | 52 | 520 | 4.0E-24 |
| sp|Q8N4V2|SVOP_HUMAN | Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1 | 56 | 553 | 5.0E-24 |
| sp|Q1JP63|SVOP_BOVIN | Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1 | 56 | 553 | 6.0E-24 |
| sp|Q9Z2I7|SVOP_RAT | Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1 | 56 | 553 | 3.0E-21 |
| sp|Q8BFT9|SVOP_MOUSE | Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1 | 56 | 569 | 1.0E-20 |
| sp|Q940M4|OCT7_ARATH | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1 | 57 | 522 | 1.0E-16 |
| sp|Q29397|SV2A_BOVIN | Synaptic vesicle glycoprotein 2A OS=Bos taurus GN=SV2A PE=2 SV=1 | 65 | 304 | 5.0E-16 |
| sp|Q4R4X3|SV2A_MACFA | Synaptic vesicle glycoprotein 2A OS=Macaca fascicularis GN=SV2A PE=2 SV=1 | 65 | 304 | 6.0E-16 |
| sp|Q02563|SV2A_RAT | Synaptic vesicle glycoprotein 2A OS=Rattus norvegicus GN=Sv2a PE=1 SV=2 | 65 | 304 | 6.0E-16 |
| sp|Q9JIS5|SV2A_MOUSE | Synaptic vesicle glycoprotein 2A OS=Mus musculus GN=Sv2a PE=1 SV=1 | 65 | 304 | 6.0E-16 |
| sp|Q7L0J3|SV2A_HUMAN | Synaptic vesicle glycoprotein 2A OS=Homo sapiens GN=SV2A PE=1 SV=1 | 65 | 304 | 6.0E-16 |
| sp|Q5R4L9|SV2A_PONAB | Synaptic vesicle glycoprotein 2A OS=Pongo abelii GN=SV2A PE=2 SV=1 | 67 | 304 | 2.0E-15 |
| sp|Q7L1I2|SV2B_HUMAN | Synaptic vesicle glycoprotein 2B OS=Homo sapiens GN=SV2B PE=1 SV=1 | 20 | 304 | 1.0E-13 |
| sp|Q8BG39|SV2B_MOUSE | Synaptic vesicle glycoprotein 2B OS=Mus musculus GN=Sv2b PE=1 SV=1 | 20 | 304 | 2.0E-13 |
| sp|Q69ZS6|SV2C_MOUSE | Synaptic vesicle glycoprotein 2C OS=Mus musculus GN=Sv2c PE=1 SV=2 | 65 | 222 | 7.0E-13 |
| sp|Q63564|SV2B_RAT | Synaptic vesicle glycoprotein 2B OS=Rattus norvegicus GN=Sv2b PE=1 SV=1 | 20 | 304 | 2.0E-12 |
| sp|Q9Z2I6|SV2C_RAT | Synaptic vesicle glycoprotein 2C OS=Rattus norvegicus GN=Sv2c PE=1 SV=1 | 65 | 222 | 2.0E-12 |
| sp|Q496J9|SV2C_HUMAN | Synaptic vesicle glycoprotein 2C OS=Homo sapiens GN=SV2C PE=1 SV=1 | 65 | 222 | 3.0E-12 |
| sp|O70577|S22A2_MOUSE | Solute carrier family 22 member 2 OS=Mus musculus GN=Slc22a2 PE=1 SV=1 | 117 | 522 | 1.0E-11 |
| sp|O34691|NAIP_BACSU | Putative niacin/nicotinamide transporter NaiP OS=Bacillus subtilis (strain 168) GN=naiP PE=1 SV=1 | 75 | 221 | 2.0E-11 |
| sp|Q8H074|PT112_ORYSJ | Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1 | 61 | 570 | 1.0E-10 |
| sp|Q09852|YAEC_SCHPO | Putative inorganic phosphate transporter C23D3.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23D3.12 PE=1 SV=1 | 65 | 568 | 4.0E-10 |
| sp|Q43975|PCAK_ACIAD | 4-hydroxybenzoate transporter PcaK OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=pcaK PE=1 SV=3 | 48 | 396 | 8.0E-09 |
| sp|Q8GSD9|PHT12_ORYSJ | Inorganic phosphate transporter 1-2 OS=Oryza sativa subsp. japonica GN=PTH1-2 PE=2 SV=1 | 52 | 574 | 1.0E-08 |
| sp|Q8H6G8|PHT18_ORYSJ | Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1 | 50 | 328 | 1.0E-07 |
| sp|Q17QN9|S22AG_BOVIN | Solute carrier family 22 member 16 OS=Bos taurus GN=SLC22A16 PE=2 SV=2 | 99 | 517 | 2.0E-06 |
| sp|Q9ZWT3|PHT16_ARATH | Probable inorganic phosphate transporter 1-6 OS=Arabidopsis thaliana GN=PHT1-6 PE=1 SV=1 | 56 | 570 | 2.0E-06 |
| sp|Q51955|PCAK_PSEPU | 4-hydroxybenzoate transporter PcaK OS=Pseudomonas putida GN=pcaK PE=1 SV=1 | 53 | 197 | 2.0E-06 |
| sp|P25297|PHO84_YEAST | Inorganic phosphate transporter PHO84 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO84 PE=1 SV=2 | 59 | 567 | 3.0E-06 |
| sp|Q7X7V2|PHT15_ORYSJ | Probable inorganic phosphate transporter 1-5 OS=Oryza sativa subsp. japonica GN=PHT1-5 PE=2 SV=2 | 59 | 573 | 4.0E-06 |
| sp|Q9SYQ1|PHT18_ARATH | Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2 | 59 | 332 | 4.0E-06 |
| sp|Q9I6Q3|PCAK_PSEAE | 4-hydroxybenzoate transporter PcaK OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pcaK PE=3 SV=1 | 57 | 197 | 7.0E-06 |
| sp|A7MJD1|NANT_CROS8 | Putative sialic acid transporter OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nanT PE=3 SV=1 | 66 | 202 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 93 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 137 | 156 | 19 |
| 4 | 166 | 188 | 22 |
| 5 | 195 | 217 | 22 |
| 6 | 253 | 275 | 22 |
| 7 | 370 | 392 | 22 |
| 8 | 412 | 434 | 22 |
| 9 | 441 | 463 | 22 |
| 10 | 536 | 558 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5352 MKEKSADTSSLKPSTSLSTPSDISGCATTDVELAPALPLDLSGLQGLSLHEQKCVLVNRELDAQGMGRYQWYVWG LCGFGYFLDLMWAQAFSLCLSPLQQELGFSNSQSGRISTCFNAGLTAGALFWGFMSDIVGRRWAFNLTCLLSSIF GLVLGLSNSYTTFLVLTAFVGFGVGGNIPVDGAIFLEFVPQSRRFLLACLSVFQPLGVVACSSLAFAFIPSHSCT PNFSQHDALPSCRNSAAPCCARSNNMGWRYLLFTLGGITLFVFAARFLVFTCRETPKFLIYQGQDQRAIETMRHV SHVNGNHCRLSLQVFEALDREHQRLSDSASDDDQGRKPPGVLVVSKPKWRLSQQLNRYKMLFSSWQMSRLTLLTW LTYILDFSGFTVAGFYLPRILALKNGGAHVSLKFTYASYIYTYAPGIVGVLVGAWTCRIPRIGRKWTMVLASGLM GTSIFLLSQVDTVAKREGLFTLEYFFQSMFNAVLYGWTPEAFPAPVRGTACGMASFWGRLFGIVSPLIAQHLYGR SSSGNGDINSVLYLAGGVTLGCVISTALLPTAMMETQDERSQKAQVDAT* |
| Coding | >OphauB2|5352 ATGAAGGAAAAGTCTGCTGACACGTCGTCGCTCAAGCCGTCGACATCGCTCTCGACGCCCAGCGACATTTCGGGA TGCGCCACCACCGATGTCGAGCTGGCGCCCGCGCTGCCACTCGATCTGTCGGGTCTGCAGGGCCTGTCGCTGCAC GAGCAGAAATGCGTCTTGGTGAATCGCGAGCTCGACGCGCAGGGCATGGGGCGCTACCAGTGGTATGTCTGGGGC CTGTGTGGCTTTGGCTACTTTCTCGACCTCATGTGGGCGCAGGCTTTTAGCCTGTGCTTGAGTCCGCTGCAGCAG GAGCTTGGCTTTTCCAATTCGCAGTCGGGCAGGATCTCGACGTGCTTCAACGCGGGCTTGACTGCCGGGGCGCTG TTTTGGGGCTTCATGTCGGACATTGTCGGCCGGCGCTGGGCCTTCAACCTCACCTGCCTCCTCTCCTCCATCTTT GGCCTCGTCCTCGGCCTCTCCAACAGCTACACCACCTTTCTCGTCCTGACCGCATTTGTCGGCTTCGGCGTGGGC GGCAACATCCCCGTCGACGGCGCCATCTTTCTCGAATTCGTGCCCCAGTCGCGCCGATTTCTGCTGGCGTGCCTG TCCGTCTTTCAGCCACTGGGCGTCGTGGCCTGCTCGTCTTTAGCCTTTGCTTTTATACCCAGTCACTCGTGTACG CCAAACTTTTCGCAGCACGATGCGCTGCCGTCGTGCCGAAACAGCGCGGCGCCGTGCTGTGCGCGCTCCAACAAC ATGGGCTGGCGCTACCTGCTCTTTACGCTCGGCGGCATCACGCTCTTTGTCTTTGCGGCGCGCTTCCTCGTCTTT ACGTGTCGCGAGACGCCCAAGTTTCTCATCTACCAAGGGCAGGACCAACGAGCGATTGAGACGATGCGCCATGTT TCTCACGTCAACGGAAATCACTGCCGTCTCAGTCTGCAAGTTTTTGAGGCGCTGGACCGCGAGCACCAGCGCCTC AGCGACTCGGCCAGTGACGACGACCAGGGGAGAAAGCCGCCAGGGGTACTTGTCGTGTCCAAGCCCAAGTGGAGG CTGAGCCAGCAGCTCAACCGATACAAGATGCTCTTTTCTAGCTGGCAAATGTCGCGCCTGACGCTGCTCACTTGG CTGACGTATATCCTCGACTTTTCCGGCTTCACCGTTGCCGGCTTCTACCTGCCGCGGATTCTGGCGCTTAAAAAT GGCGGCGCCCACGTTAGCCTCAAGTTCACCTACGCCTCGTACATTTACACGTATGCGCCAGGCATCGTGGGCGTC CTCGTGGGCGCCTGGACATGTCGCATTCCACGAATAGGGCGCAAGTGGACCATGGTGCTCGCCTCGGGTCTCATG GGCACCTCCATCTTCCTGCTGTCTCAGGTGGACACAGTGGCCAAGCGCGAGGGCCTCTTTACTCTCGAGTATTTC TTCCAGTCCATGTTCAACGCGGTGCTTTACGGCTGGACGCCCGAGGCCTTTCCCGCGCCTGTTCGCGGCACGGCG TGCGGCATGGCCAGTTTCTGGGGCCGCCTGTTTGGCATTGTCAGCCCTCTCATTGCTCAGCATCTCTATGGCCGC AGCTCTAGCGGCAACGGCGACATTAATAGCGTTCTTTACCTTGCCGGCGGCGTGACGCTGGGCTGCGTCATTAGC ACGGCGCTACTTCCCACGGCCATGATGGAGACGCAGGATGAGCGTTCGCAAAAGGCTCAAGTTGACGCCACTTGA |
| Transcript | >OphauB2|5352 ATGAAGGAAAAGTCTGCTGACACGTCGTCGCTCAAGCCGTCGACATCGCTCTCGACGCCCAGCGACATTTCGGGA TGCGCCACCACCGATGTCGAGCTGGCGCCCGCGCTGCCACTCGATCTGTCGGGTCTGCAGGGCCTGTCGCTGCAC GAGCAGAAATGCGTCTTGGTGAATCGCGAGCTCGACGCGCAGGGCATGGGGCGCTACCAGTGGTATGTCTGGGGC CTGTGTGGCTTTGGCTACTTTCTCGACCTCATGTGGGCGCAGGCTTTTAGCCTGTGCTTGAGTCCGCTGCAGCAG GAGCTTGGCTTTTCCAATTCGCAGTCGGGCAGGATCTCGACGTGCTTCAACGCGGGCTTGACTGCCGGGGCGCTG TTTTGGGGCTTCATGTCGGACATTGTCGGCCGGCGCTGGGCCTTCAACCTCACCTGCCTCCTCTCCTCCATCTTT GGCCTCGTCCTCGGCCTCTCCAACAGCTACACCACCTTTCTCGTCCTGACCGCATTTGTCGGCTTCGGCGTGGGC GGCAACATCCCCGTCGACGGCGCCATCTTTCTCGAATTCGTGCCCCAGTCGCGCCGATTTCTGCTGGCGTGCCTG TCCGTCTTTCAGCCACTGGGCGTCGTGGCCTGCTCGTCTTTAGCCTTTGCTTTTATACCCAGTCACTCGTGTACG CCAAACTTTTCGCAGCACGATGCGCTGCCGTCGTGCCGAAACAGCGCGGCGCCGTGCTGTGCGCGCTCCAACAAC ATGGGCTGGCGCTACCTGCTCTTTACGCTCGGCGGCATCACGCTCTTTGTCTTTGCGGCGCGCTTCCTCGTCTTT ACGTGTCGCGAGACGCCCAAGTTTCTCATCTACCAAGGGCAGGACCAACGAGCGATTGAGACGATGCGCCATGTT TCTCACGTCAACGGAAATCACTGCCGTCTCAGTCTGCAAGTTTTTGAGGCGCTGGACCGCGAGCACCAGCGCCTC AGCGACTCGGCCAGTGACGACGACCAGGGGAGAAAGCCGCCAGGGGTACTTGTCGTGTCCAAGCCCAAGTGGAGG CTGAGCCAGCAGCTCAACCGATACAAGATGCTCTTTTCTAGCTGGCAAATGTCGCGCCTGACGCTGCTCACTTGG CTGACGTATATCCTCGACTTTTCCGGCTTCACCGTTGCCGGCTTCTACCTGCCGCGGATTCTGGCGCTTAAAAAT GGCGGCGCCCACGTTAGCCTCAAGTTCACCTACGCCTCGTACATTTACACGTATGCGCCAGGCATCGTGGGCGTC CTCGTGGGCGCCTGGACATGTCGCATTCCACGAATAGGGCGCAAGTGGACCATGGTGCTCGCCTCGGGTCTCATG GGCACCTCCATCTTCCTGCTGTCTCAGGTGGACACAGTGGCCAAGCGCGAGGGCCTCTTTACTCTCGAGTATTTC TTCCAGTCCATGTTCAACGCGGTGCTTTACGGCTGGACGCCCGAGGCCTTTCCCGCGCCTGTTCGCGGCACGGCG TGCGGCATGGCCAGTTTCTGGGGCCGCCTGTTTGGCATTGTCAGCCCTCTCATTGCTCAGCATCTCTATGGCCGC AGCTCTAGCGGCAACGGCGACATTAATAGCGTTCTTTACCTTGCCGGCGGCGTGACGCTGGGCTGCGTCATTAGC ACGGCGCTACTTCCCACGGCCATGATGGAGACGCAGGATGAGCGTTCGCAAAAGGCTCAAGTTGACGCCACTTGA |
| Gene | >OphauB2|5352 ATGAAGGAAAAGTCTGCTGACACGTCGTCGCTCAAGCCGTCGACATCGCTCTCGACGCCCAGCGACATTTCGGGA TGCGCCACCACCGATGTCGAGCTGGCGCCCGCGCTGCCACTCGATCTGTCGGGTCTGCAGGGCCTGTCGCTGCAC GAGCAGAAATGCGTCTTGGTGAATCGCGAGCTCGACGCGCAGGGCATGGGGCGCTACCAGTGGTATGTCTGGGGC CTGTGTGGCTTTGGCTACTTTCTCGACCTCATGTGGGCGCAGGCTTTTAGCCTGTGCTTGAGTCCGCTGCAGCAG GAGCTTGGCTTTTCCAATTCGCAGTCGGGCAGGATCTCGACGTGCTTCAACGCGGGCTTGACTGCCGGGGCGCTG TTTTGGGGCTTCATGTCGGACATTGTCGGTGAGCAGACGCCATTTCCTCCTCTCCTCGCCTCATCATGTCTCTTC TCTTTTTTTCCCCTTTTGCTTCGTCAATTTAGCAAGACGCAGTAAAACAGAGGCAGGACTGCATGCTGACACTGC TGCCAGGCCGGCGCTGGGCCTTCAACCTCACCTGCCTCCTCTCCTCCATCTTTGGCCTCGTCCTCGGCCTCTCCA ACAGCTACACCACCTTTCTCGTCCTGACCGCATTTGTCGGCTTCGGCGTGGGCGGCAACATCCCCGTCGACGGCG CCATCTTTCTCGAATTCGTGCCCCAGTCGCGCCGATTTCTGCTGGCGTGCCTGTCCGTCTTTCAGCCACTGGGCG TCGTGGCCTGCTCGTCTTTAGCCTTTGCTTTTATACCCAGTCACTCGTGTACGCCAAACTTTTCGCAGCACGATG CGCTGCCGTCGTGCCGAAACAGCGCGGCGCCGTGCTGTGCGCGCTCCAACAACATGGGCTGGCGCTACCTGCTCT TTACGCTCGGCGGCATCACGCTCTTTGTCTTTGCGGCGCGCTTCCTCGTCTTTACGTGTCGCGAGACGCCCAAGT TTCTCATCTACCAAGGGCAGGACCAACGAGCGATTGAGACGATGCGCCATGTTTCTCACGTCAACGGAAATCACT GCCGTCTCAGTCTGCAAGTTTTTGAGGCGCTGGACCGCGAGCACCAGCGCCTCAGCGACTCGGCCAGTGACGACG ACCAGGGGAGAAAGCCGCCAGGGGTACTTGTCGTGTCCAAGCCCAAGTGGAGGCTGAGCCAGCAGCTCAACCGAT ACAAGATGCTCTTTTCTAGCTGGCAAATGTCGCGCCTGACGCTGCTCACTTGGCTGACGTATATCCTCGACTTTT CCGGCTTCACCGTTGCCGGCTTCTACCTGCCGCGGATTCTGGCGCTTAAAAATGGCGGCGCCCACGTTAGCCTCA AGTTCACCTACGCCTCGTACATTTACACGTATGCGCCAGGCATCGTGGGCGTCCTCGTGGGCGCCTGGACATGTC GCATTCCACGAATAGGGCGCAAGTGGACCATGGTGCTCGCCTCGGGTCTCATGGGCACCTCCATCTTCCTGCTGT CTCAGGTGGACACAGTGGCCAAGCGCGAGGGCCTCTTTACTCTCGAGTATTTCTTCCAGTCCATGTTCAACGCGG TGCTTTACGGCTGGACGCCCGAGGCCTTTCCCGCGCCTGTTCGCGGCACGGCGTGCGGCATGGCCAGTTTCTGGG GCCGCCTGTTTGGCATTGTCAGCCCTCTCATTGCTCAGCATCTCTATGGCCGCAGCTCTAGCGGCAACGGCGACA TTAATAGCGTTCTTTACCTTGCCGGCGGCGTGACGCTGGGCTGCGTCATTAGCACGGCGCTACTTCCCACGGCCA TGATGGAGACGCAGGATGAGCGTTCGCAAAAGGCTCAAGTTGACGCCACTTGA |