Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5317
Gene name
LocationContig_4:321916..322829
Strand-
Gene length (bp)913
Transcript length (bp)828
Coding sequence length (bp)828
Protein length (aa) 276

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08193 INO80_Ies4 INO80 complex subunit Ies4 2.7E-75 5 240

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9P7S9|IES4_SCHPO INO80 complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ies4 PE=1 SV=1 158 207 3.0E-11

GO

GO Term Description Terminal node
GO:0006338 chromatin remodeling Yes
GO:0031011 Ino80 complex Yes
GO:0032991 protein-containing complex No
GO:0071840 cellular component organization or biogenesis No
GO:1904949 ATPase complex No
GO:0009987 cellular process No
GO:0070603 SWI/SNF superfamily-type complex No
GO:0008150 biological_process No
GO:0016043 cellular component organization No
GO:0140513 nuclear protein-containing complex No
GO:1902494 catalytic complex No
GO:0005575 cellular_component No
GO:0006325 chromatin organization No
GO:0097346 INO80-type complex No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4380
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3069
Ophiocordyceps australis map64 (Brazil) OphauB2|5317 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|02047
Ophiocordyceps camponoti-rufipedis Ophun1|5677
Ophiocordyceps kimflemingae Ophio5|6826
Ophiocordyceps subramaniannii Hirsu2|9065

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5317
MPPSSKITEGRRKSAGKPTLLITLSLAPPKLRSLLLPQSTDEESPVKESASSKDDSKASPANSATPAPQSNSNSG
ENASDSNAATPAAEGTPVSSAMGPPADGPKKKGIKRSAATANGTGEGGSKPPRGKPGPKKKPRLEDGTIDHSTNR
PAGGHKLGPKANQGAINAGLRALDRSGKPCRKWSRGGFCLKSFTGVQWEIPRWKAPPKKSLEPNMNDSAVPSAEN
SSSKENKENRPDANSASNSNSGADMEMRSVLSVNASSPAPMAVGPAPITA*
Coding >OphauB2|5317
ATGCCTCCCTCTTCCAAGATTACCGAGGGCCGACGCAAGTCTGCTGGCAAACCCACCTTGCTCATCACCCTCTCC
CTCGCGCCCCCCAAGCTGCGCAGCCTCTTGCTGCCCCAGTCCACCGACGAGGAGTCGCCTGTCAAGGAGTCGGCT
TCCTCCAAGGATGACTCCAAGGCCTCGCCCGCCAACTCGGCCACCCCTGCACCACAGAGCAACTCCAACAGCGGC
GAGAATGCCTCTGATTCAAATGCAGCAACTCCTGCCGCAGAGGGCACCCCCGTTTCATCTGCCATGGGCCCTCCT
GCTGACGGTCCCAAGAAGAAGGGCATCAAGCGCTCTGCTGCTACTGCAAACGGCACCGGAGAAGGCGGCTCCAAA
CCACCCAGAGGAAAGCCGGGCCCTAAGAAGAAGCCTCGACTGGAGGACGGCACTATAGACCATTCTACTAACAGG
CCTGCTGGCGGTCACAAGCTCGGGCCCAAGGCCAATCAAGGGGCCATCAACGCTGGTCTACGCGCCCTCGACAGA
TCTGGGAAGCCCTGTCGCAAGTGGTCACGCGGAGGCTTTTGTCTCAAGAGCTTTACTGGCGTGCAGTGGGAGATT
CCCCGCTGGAAAGCACCGCCCAAGAAATCACTTGAACCCAACATGAATGACTCGGCTGTTCCGTCGGCCGAAAAC
AGCAGCAGCAAGGAGAACAAAGAAAACAGGCCCGACGCCAATAGCGCCAGCAACAGCAACAGTGGCGCCGACATG
GAAATGAGAAGCGTTCTTAGTGTCAACGCCTCGTCACCTGCCCCCATGGCCGTCGGGCCGGCCCCCATTACAGCA
TAA
Transcript >OphauB2|5317
ATGCCTCCCTCTTCCAAGATTACCGAGGGCCGACGCAAGTCTGCTGGCAAACCCACCTTGCTCATCACCCTCTCC
CTCGCGCCCCCCAAGCTGCGCAGCCTCTTGCTGCCCCAGTCCACCGACGAGGAGTCGCCTGTCAAGGAGTCGGCT
TCCTCCAAGGATGACTCCAAGGCCTCGCCCGCCAACTCGGCCACCCCTGCACCACAGAGCAACTCCAACAGCGGC
GAGAATGCCTCTGATTCAAATGCAGCAACTCCTGCCGCAGAGGGCACCCCCGTTTCATCTGCCATGGGCCCTCCT
GCTGACGGTCCCAAGAAGAAGGGCATCAAGCGCTCTGCTGCTACTGCAAACGGCACCGGAGAAGGCGGCTCCAAA
CCACCCAGAGGAAAGCCGGGCCCTAAGAAGAAGCCTCGACTGGAGGACGGCACTATAGACCATTCTACTAACAGG
CCTGCTGGCGGTCACAAGCTCGGGCCCAAGGCCAATCAAGGGGCCATCAACGCTGGTCTACGCGCCCTCGACAGA
TCTGGGAAGCCCTGTCGCAAGTGGTCACGCGGAGGCTTTTGTCTCAAGAGCTTTACTGGCGTGCAGTGGGAGATT
CCCCGCTGGAAAGCACCGCCCAAGAAATCACTTGAACCCAACATGAATGACTCGGCTGTTCCGTCGGCCGAAAAC
AGCAGCAGCAAGGAGAACAAAGAAAACAGGCCCGACGCCAATAGCGCCAGCAACAGCAACAGTGGCGCCGACATG
GAAATGAGAAGCGTTCTTAGTGTCAACGCCTCGTCACCTGCCCCCATGGCCGTCGGGCCGGCCCCCATTACAGCA
TAA
Gene >OphauB2|5317
ATGCCTCCCTCTTCCAAGATTACCGAGGGCCGACGCAAGTCTGCTGGCAAACCCACCTTGCTCATCACCCTCTCC
CTCGCGCCCCCCAAGCTGCGCAGCCTCTTGCTGCCCCAGTCCACCGACGAGGAGTCGCCTGTCAAGGAGTCGGCT
TCCTCCAAGGATGACTCCAAGGCCTCGCCCGCCAACTCGGCCACCCCTGCACCACAGAGCAACTCCAACAGCGGC
GAGAATGCCTCTGATTCAAATGCAGCAACTCCTGCCGCAGAGGGCACCCCCGTTTCATCTGCCATGGGCCCTCCT
GCTGACGGTCCCAAGAAGAAGGGCATCAAGCGCTCTGCTGCTACTGCAAACGGCACCGGAGAAGGCGGCTCCAAA
CCACCCAGAGGAAAGCCGGGCCCTAAGAAGAAGCCTCGACTGTATGTCGTTTGTTCTCGTCGTGGTGCTATTATG
CATCGCGTCATTCCGCCTCGGAAAGCATGCACGTACTGACTTGCAGAACAGGGAGGACGGCACTATAGACCATTC
TACTAACAGGCCTGCTGGCGGTCACAAGCTCGGGCCCAAGGCCAATCAAGGGGCCATCAACGCTGGTCTACGCGC
CCTCGACAGATCTGGGAAGCCCTGTCGCAAGTGGTCACGCGGAGGCTTTTGTCTCAAGAGCTTTACTGGCGTGCA
GTGGGAGATTCCCCGCTGGAAAGCACCGCCCAAGAAATCACTTGAACCCAACATGAATGACTCGGCTGTTCCGTC
GGCCGAAAACAGCAGCAGCAAGGAGAACAAAGAAAACAGGCCCGACGCCAATAGCGCCAGCAACAGCAACAGTGG
CGCCGACATGGAAATGAGAAGCGTTCTTAGTGTCAACGCCTCGTCACCTGCCCCCATGGCCGTCGGGCCGGCCCC
CATTACAGCATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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