© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5314 |
| Gene name | |
| Location | Contig_4:316590..317491 |
| Strand | + |
| Gene length (bp) | 901 |
| Transcript length (bp) | 846 |
| Coding sequence length (bp) | 846 |
| Protein length (aa) | 282 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF17172 | GST_N_4 | Glutathione S-transferase N-terminal domain | 5.0E-16 | 59 | 156 |
| PF17171 | GST_C_6 | Glutathione S-transferase, C-terminal domain | 1.3E-12 | 206 | 269 |
| PF10568 | Tom37 | Outer mitochondrial membrane transport complex protein | 1.6E-06 | 61 | 157 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HE00|MTX1_SCHPO | Metaxin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mtx1 PE=3 SV=1 | 17 | 242 | 3.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0001401 | SAM complex | Yes |
| GO:0032991 | protein-containing complex | No |
| GO:0098799 | outer mitochondrial membrane protein complex | No |
| GO:0005575 | cellular_component | No |
| GO:0098796 | membrane protein complex | No |
| GO:0005742 | mitochondrial outer membrane translocase complex | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5314 MATSPNWFPEAPSPIRSVFRRFPLRLFSPEALPSEARCDRPQLFLYTNRSDSDRPGFTPSCLKWQLWLRICGIRV EIRSSNAHASPGRSLPFVVPAMSDSQSPNPIPSSLIAAYARNHSSYNEPQIPSLRFETYLSLFESSIQPAWLYTL YLVPENACLVAVLFMPRSHIIHPHLLRQLRLDAHQSIISLSRHYRYSAQLLLNNATQAFLALDKLLGSSAYFFDA PSPTIFDATVFSYTHLILPNSSIHWPQNPLRPSLDKCHNLQRHRRLLYSRYFPVKL* |
| Coding | >OphauB2|5314 ATGGCCACCTCGCCAAACTGGTTCCCCGAGGCGCCCTCGCCCATCCGTTCCGTCTTTCGTCGCTTTCCTCTCCGC TTATTTAGCCCCGAAGCTCTTCCCAGCGAAGCCCGTTGTGACCGGCCCCAGCTCTTCCTTTATACTAATCGCAGC GACTCTGACCGCCCCGGCTTCACCCCAAGCTGCCTCAAGTGGCAGCTCTGGCTACGCATTTGCGGCATCCGTGTC GAAATCCGCTCCTCCAATGCCCACGCCTCGCCAGGCCGCTCTCTGCCCTTTGTCGTTCCCGCCATGAGCGACTCT CAGTCCCCCAACCCTATTCCCTCTTCCCTCATTGCTGCCTATGCTCGCAACCACTCTTCTTACAATGAACCCCAA ATCCCCTCCCTTCGCTTCGAGACCTACCTCTCCCTCTTTGAATCCTCCATTCAGCCCGCATGGCTCTATACTCTC TACCTCGTCCCCGAGAATGCCTGCCTCGTTGCTGTTCTCTTCATGCCGAGATCTCATATAATACACCCGCACTTG CTCCGCCAACTTCGTCTCGACGCCCACCAGTCCATCATCTCCCTCTCCCGCCACTACAGGTACAGCGCCCAGCTT CTCCTCAACAATGCAACTCAAGCTTTCCTGGCTCTCGACAAGCTTCTCGGCTCCAGTGCCTACTTCTTTGATGCC CCCTCACCAACAATATTCGACGCCACCGTCTTCTCCTACACACACCTCATTCTTCCAAACAGCTCCATCCACTGG CCACAAAATCCTCTTCGCCCCTCTCTCGACAAATGCCACAACTTGCAACGTCACCGCAGACTTCTTTATTCTCGC TACTTTCCGGTAAAGCTTTAA |
| Transcript | >OphauB2|5314 ATGGCCACCTCGCCAAACTGGTTCCCCGAGGCGCCCTCGCCCATCCGTTCCGTCTTTCGTCGCTTTCCTCTCCGC TTATTTAGCCCCGAAGCTCTTCCCAGCGAAGCCCGTTGTGACCGGCCCCAGCTCTTCCTTTATACTAATCGCAGC GACTCTGACCGCCCCGGCTTCACCCCAAGCTGCCTCAAGTGGCAGCTCTGGCTACGCATTTGCGGCATCCGTGTC GAAATCCGCTCCTCCAATGCCCACGCCTCGCCAGGCCGCTCTCTGCCCTTTGTCGTTCCCGCCATGAGCGACTCT CAGTCCCCCAACCCTATTCCCTCTTCCCTCATTGCTGCCTATGCTCGCAACCACTCTTCTTACAATGAACCCCAA ATCCCCTCCCTTCGCTTCGAGACCTACCTCTCCCTCTTTGAATCCTCCATTCAGCCCGCATGGCTCTATACTCTC TACCTCGTCCCCGAGAATGCCTGCCTCGTTGCTGTTCTCTTCATGCCGAGATCTCATATAATACACCCGCACTTG CTCCGCCAACTTCGTCTCGACGCCCACCAGTCCATCATCTCCCTCTCCCGCCACTACAGGTACAGCGCCCAGCTT CTCCTCAACAATGCAACTCAAGCTTTCCTGGCTCTCGACAAGCTTCTCGGCTCCAGTGCCTACTTCTTTGATGCC CCCTCACCAACAATATTCGACGCCACCGTCTTCTCCTACACACACCTCATTCTTCCAAACAGCTCCATCCACTGG CCACAAAATCCTCTTCGCCCCTCTCTCGACAAATGCCACAACTTGCAACGTCACCGCAGACTTCTTTATTCTCGC TACTTTCCGGTAAAGCTTTAA |
| Gene | >OphauB2|5314 ATGGCCACCTCGCCAAACTGGTTCCCCGAGGCGCCCTCGCCCATCCGTTCCGTCTTTCGTCGCTTTCCTCTCCGC TTATTTAGCCCCGAAGCTCTTCCCAGCGAAGCCCGTTGTGACCGGCCCCAGCTCTTCCTTTATACTAATCGCAGC GACTCTGACCGCCCCGGCTTCACCCCAAGCTGCCTCAAGTGGCAGCTCTGGCTACGCATTTGCGGCATCCGTGTC GAAATCCGCTCCTCCAATGCCCACGCCTCGCCAGGCCGCTCTCTGCCCTTTGTCGTTCCCGCCATGAGCGACTCT CAGTCCCCCAACCCTATTCCCTCTTCCCTCATTGCTGCCTATGCTCGCAACCACTCTTCTTACAATGAACCCCAA ATCCCCTCCCTTCGCTTCGAGACCTACCTCTCCCTCTTTGAATCCTCCATTCAGCCCGCATGGGTCAGTTGCTTC CATCCTTTGCTCTCTTTGCTCGCTAACAATGTCTCCATCTTAGCTCTATACTCTCTACCTCGTCCCCGAGAATGC CTGCCTCGTTGCTGTTCTCTTCATGCCGAGATCTCATATAATACACCCGCACTTGCTCCGCCAACTTCGTCTCGA CGCCCACCAGTCCATCATCTCCCTCTCCCGCCACTACAGGTACAGCGCCCAGCTTCTCCTCAACAATGCAACTCA AGCTTTCCTGGCTCTCGACAAGCTTCTCGGCTCCAGTGCCTACTTCTTTGATGCCCCCTCACCAACAATATTCGA CGCCACCGTCTTCTCCTACACACACCTCATTCTTCCAAACAGCTCCATCCACTGGCCACAAAATCCTCTTCGCCC CTCTCTCGACAAATGCCACAACTTGCAACGTCACCGCAGACTTCTTTATTCTCGCTACTTTCCGGTAAAGCTTTA A |