Protein ID | OphauB2|530 |
Gene name | |
Location | Contig_109:67646..69316 |
Strand | + |
Gene length (bp) | 1670 |
Transcript length (bp) | 1611 |
Coding sequence length (bp) | 1611 |
Protein length (aa) | 537 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00646 | F-box | F-box domain | 1.9E-08 | 121 | 154 |
PF12937 | F-box-like | F-box-like | 7.0E-07 | 121 | 154 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|530 MAQNHPPAAVDSPPSTEFASELYFEKLSQRNARNQQQQQHEALESPTLSSPSTFILPLRESRVSDADAVKPADQK RDKSRFFGLRHKVSLLHSKAPLGDSESAPRSSAATSRKCTLDHLVLDLPSELQAQILSSLPLTDLLNLRLASKSW HALVTLNESPIVRYHLKNHIPAYALRLYPVNDASDYTFYHLCSLWHRLHVAAKLAFMMCEWITKGIFLRQTEAQR SAFQPQHERMRRRLIPLLFTIFHFFETYRRLHIKYIKEHQGRGLGRTPYTWNPIEREIMAMYDDQTLLRVHEVFP LVISSFCRRLRPPTYAGLVERSLRGYIRERPADHIHAAILCLGGLRQVERLWETKGYNSRRTAVDTWYNGLVKEL AAETPPPVAKSRLGLKAFGRSKKTAVNGDKASPRGMASEKVKSPSFAPPDTPTVDGDAGLDGSWIFHTSLAADLP MAPLASDAANLVLGDLPVLQQIWLATAEATILERGIVQRTQDIKRNQQLMLDLIREDGVGEEDEWLYGRFTPDSV RPPLGATDDDD* |
Coding | >OphauB2|530 ATGGCTCAAAATCACCCCCCCGCCGCCGTGGACTCTCCGCCGTCGACCGAGTTCGCCTCTGAGCTCTACTTTGAG AAGCTCAGCCAGCGCAATGCGCGCAATCAGCAGCAACAGCAGCACGAGGCTCTCGAGTCGCCTACCCTCTCGTCT CCCTCCACCTTTATCCTGCCGCTGCGCGAAAGCAGAGTTTCCGACGCCGATGCGGTCAAGCCCGCGGACCAGAAG CGCGATAAGAGCCGGTTCTTTGGCCTGAGGCACAAGGTTTCTCTCCTGCATTCCAAGGCTCCTCTTGGCGATTCG GAATCGGCGCCCCGTTCCTCGGCTGCCACTTCTCGCAAATGCACCCTTGACCATCTCGTCCTTGACCTGCCCAGC GAATTACAGGCTCAAATCTTGTCGTCGCTGCCCCTCACCGATCTACTCAATCTCCGCCTCGCCTCCAAGTCGTGG CACGCCCTCGTCACCCTCAACGAATCGCCCATTGTGCGCTACCACCTCAAGAACCACATCCCTGCCTACGCACTC CGTCTATACCCCGTCAATGACGCATCCGATTATACCTTTTATCACCTCTGCAGCCTCTGGCACCGCTTGCACGTG GCTGCCAAACTAGCCTTTATGATGTGCGAATGGATCACCAAGGGCATCTTTTTGCGCCAAACCGAGGCCCAAAGA AGCGCTTTCCAACCCCAACACGAGCGCATGCGCCGCCGCCTCATTCCCCTCTTATTCACCATTTTTCATTTTTTC GAGACGTACCGGCGACTGCACATCAAGTACATCAAGGAGCATCAGGGGCGTGGACTTGGCCGCACGCCCTATACA TGGAACCCCATTGAGAGGGAGATTATGGCCATGTACGACGACCAGACCCTTCTCAGAGTCCACGAGGTCTTTCCC CTGGTCATTTCTTCCTTTTGCCGCCGGTTGCGACCACCCACGTATGCCGGTCTTGTTGAGCGATCTCTGCGCGGC TATATTAGAGAGCGGCCGGCCGACCACATTCACGCCGCCATTCTCTGCCTGGGGGGGCTGCGCCAGGTGGAGCGC CTGTGGGAAACAAAGGGATACAATAGCCGCCGGACCGCCGTGGACACGTGGTACAATGGCCTTGTCAAGGAGTTG GCGGCAGAGACGCCACCGCCCGTGGCCAAGTCGCGGCTTGGCCTCAAGGCCTTTGGGCGCAGCAAGAAGACGGCC GTCAATGGCGACAAGGCGAGTCCGCGCGGCATGGCCAGCGAAAAGGTCAAGAGCCCGTCGTTTGCTCCGCCCGAC ACCCCGACAGTCGACGGCGACGCTGGCCTCGACGGCAGCTGGATCTTCCACACGAGCCTGGCGGCCGACTTGCCC ATGGCGCCGCTGGCGAGCGACGCGGCCAACCTTGTGCTGGGCGACTTGCCCGTGCTGCAGCAAATTTGGCTCGCC ACGGCCGAGGCGACCATTCTCGAGCGCGGCATTGTGCAGCGCACCCAGGACATTAAGCGCAATCAGCAGCTCATG CTCGACTTGATTCGCGAAGACGGCGTGGGCGAGGAGGACGAGTGGCTCTATGGCCGGTTTACCCCCGACTCGGTC CGGCCGCCCCTGGGTGCCACTGACGATGACGACTAG |
Transcript | >OphauB2|530 ATGGCTCAAAATCACCCCCCCGCCGCCGTGGACTCTCCGCCGTCGACCGAGTTCGCCTCTGAGCTCTACTTTGAG AAGCTCAGCCAGCGCAATGCGCGCAATCAGCAGCAACAGCAGCACGAGGCTCTCGAGTCGCCTACCCTCTCGTCT CCCTCCACCTTTATCCTGCCGCTGCGCGAAAGCAGAGTTTCCGACGCCGATGCGGTCAAGCCCGCGGACCAGAAG CGCGATAAGAGCCGGTTCTTTGGCCTGAGGCACAAGGTTTCTCTCCTGCATTCCAAGGCTCCTCTTGGCGATTCG GAATCGGCGCCCCGTTCCTCGGCTGCCACTTCTCGCAAATGCACCCTTGACCATCTCGTCCTTGACCTGCCCAGC GAATTACAGGCTCAAATCTTGTCGTCGCTGCCCCTCACCGATCTACTCAATCTCCGCCTCGCCTCCAAGTCGTGG CACGCCCTCGTCACCCTCAACGAATCGCCCATTGTGCGCTACCACCTCAAGAACCACATCCCTGCCTACGCACTC CGTCTATACCCCGTCAATGACGCATCCGATTATACCTTTTATCACCTCTGCAGCCTCTGGCACCGCTTGCACGTG GCTGCCAAACTAGCCTTTATGATGTGCGAATGGATCACCAAGGGCATCTTTTTGCGCCAAACCGAGGCCCAAAGA AGCGCTTTCCAACCCCAACACGAGCGCATGCGCCGCCGCCTCATTCCCCTCTTATTCACCATTTTTCATTTTTTC GAGACGTACCGGCGACTGCACATCAAGTACATCAAGGAGCATCAGGGGCGTGGACTTGGCCGCACGCCCTATACA TGGAACCCCATTGAGAGGGAGATTATGGCCATGTACGACGACCAGACCCTTCTCAGAGTCCACGAGGTCTTTCCC CTGGTCATTTCTTCCTTTTGCCGCCGGTTGCGACCACCCACGTATGCCGGTCTTGTTGAGCGATCTCTGCGCGGC TATATTAGAGAGCGGCCGGCCGACCACATTCACGCCGCCATTCTCTGCCTGGGGGGGCTGCGCCAGGTGGAGCGC CTGTGGGAAACAAAGGGATACAATAGCCGCCGGACCGCCGTGGACACGTGGTACAATGGCCTTGTCAAGGAGTTG GCGGCAGAGACGCCACCGCCCGTGGCCAAGTCGCGGCTTGGCCTCAAGGCCTTTGGGCGCAGCAAGAAGACGGCC GTCAATGGCGACAAGGCGAGTCCGCGCGGCATGGCCAGCGAAAAGGTCAAGAGCCCGTCGTTTGCTCCGCCCGAC ACCCCGACAGTCGACGGCGACGCTGGCCTCGACGGCAGCTGGATCTTCCACACGAGCCTGGCGGCCGACTTGCCC ATGGCGCCGCTGGCGAGCGACGCGGCCAACCTTGTGCTGGGCGACTTGCCCGTGCTGCAGCAAATTTGGCTCGCC ACGGCCGAGGCGACCATTCTCGAGCGCGGCATTGTGCAGCGCACCCAGGACATTAAGCGCAATCAGCAGCTCATG CTCGACTTGATTCGCGAAGACGGCGTGGGCGAGGAGGACGAGTGGCTCTATGGCCGGTTTACCCCCGACTCGGTC CGGCCGCCCCTGGGTGCCACTGACGATGACGACTAG |
Gene | >OphauB2|530 ATGGCTCAAAATCACCCCCCCGCCGCCGTGGACTCTCCGCCGTCGACCGAGTTCGCCTCTGAGCTCTACTTTGAG AAGCTCAGCCAGCGCAATGCGCGCAATCAGCAGCAACAGCAGCACGAGGCTCTCGAGTCGCCTACCCTCTCGTCT CCCTCCACCTTTATCCTGCCGCTGCGCGAAAGCAGAGTTTCCGACGCCGATGCGGTCAAGCCCGCGGACCAGAAG CGCGATAAGAGCCGGTTCTTTGGCCTGAGGCACAAGGTTTCTCTCCTGCATTCCAAGGCTCCTCTTGGCGATTCG GAATCGGCGCCCCGTTCCTCGGCTGCCACTTCTCGCAAATGGTTTGTTGTGGCAACACTGCTCCACTCTTGCCAC TGTGCTAACCTTGATTTCTTGTCAGCACCCTTGACCATCTCGTCCTTGACCTGCCCAGCGAATTACAGGCTCAAA TCTTGTCGTCGCTGCCCCTCACCGATCTACTCAATCTCCGCCTCGCCTCCAAGTCGTGGCACGCCCTCGTCACCC TCAACGAATCGCCCATTGTGCGCTACCACCTCAAGAACCACATCCCTGCCTACGCACTCCGTCTATACCCCGTCA ATGACGCATCCGATTATACCTTTTATCACCTCTGCAGCCTCTGGCACCGCTTGCACGTGGCTGCCAAACTAGCCT TTATGATGTGCGAATGGATCACCAAGGGCATCTTTTTGCGCCAAACCGAGGCCCAAAGAAGCGCTTTCCAACCCC AACACGAGCGCATGCGCCGCCGCCTCATTCCCCTCTTATTCACCATTTTTCATTTTTTCGAGACGTACCGGCGAC TGCACATCAAGTACATCAAGGAGCATCAGGGGCGTGGACTTGGCCGCACGCCCTATACATGGAACCCCATTGAGA GGGAGATTATGGCCATGTACGACGACCAGACCCTTCTCAGAGTCCACGAGGTCTTTCCCCTGGTCATTTCTTCCT TTTGCCGCCGGTTGCGACCACCCACGTATGCCGGTCTTGTTGAGCGATCTCTGCGCGGCTATATTAGAGAGCGGC CGGCCGACCACATTCACGCCGCCATTCTCTGCCTGGGGGGGCTGCGCCAGGTGGAGCGCCTGTGGGAAACAAAGG GATACAATAGCCGCCGGACCGCCGTGGACACGTGGTACAATGGCCTTGTCAAGGAGTTGGCGGCAGAGACGCCAC CGCCCGTGGCCAAGTCGCGGCTTGGCCTCAAGGCCTTTGGGCGCAGCAAGAAGACGGCCGTCAATGGCGACAAGG CGAGTCCGCGCGGCATGGCCAGCGAAAAGGTCAAGAGCCCGTCGTTTGCTCCGCCCGACACCCCGACAGTCGACG GCGACGCTGGCCTCGACGGCAGCTGGATCTTCCACACGAGCCTGGCGGCCGACTTGCCCATGGCGCCGCTGGCGA GCGACGCGGCCAACCTTGTGCTGGGCGACTTGCCCGTGCTGCAGCAAATTTGGCTCGCCACGGCCGAGGCGACCA TTCTCGAGCGCGGCATTGTGCAGCGCACCCAGGACATTAAGCGCAATCAGCAGCTCATGCTCGACTTGATTCGCG AAGACGGCGTGGGCGAGGAGGACGAGTGGCTCTATGGCCGGTTTACCCCCGACTCGGTCCGGCCGCCCCTGGGTG CCACTGACGATGACGACTAG |