Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5281
Gene name
LocationContig_4:223211..223882
Strand+
Gene length (bp)671
Transcript length (bp)615
Coding sequence length (bp)615
Protein length (aa) 205

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.3E-06 19 52
PF00646 F-box F-box domain 5.0E-05 19 52

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5281
MGSCQHNQMPLLYATSAMDKLPTELLLEIVAYLPPSSRKNARLASRRFYALLWRYSYRTLPSFFNPASAIDRLEE
TLAHLSPRPACVWSPRCGVPDQLPVPQSFLLAAYAALQGRPWRPSRRTFSGYDSESSGDDAETSGSDDQDTSIVT
VQSLSKCLGRKDITEDSMRQAMFRYALYLSYLHDGKGEAPQLWVFKTNLWADKA*
Coding >OphauB2|5281
ATGGGGTCTTGTCAGCATAATCAAATGCCCCTCTTGTATGCCACGAGCGCCATGGACAAGCTTCCTACAGAATTG
CTTCTTGAAATTGTGGCATATCTGCCCCCATCGTCCCGCAAAAACGCTCGTCTTGCATCACGCCGCTTTTACGCC
CTTCTCTGGAGATACTCTTACCGCACTCTTCCCTCCTTCTTCAACCCAGCCTCAGCCATTGACAGGCTCGAGGAG
ACGCTCGCCCACCTTTCTCCACGACCAGCGTGCGTCTGGTCGCCCCGGTGCGGGGTGCCAGATCAACTGCCCGTG
CCTCAGAGTTTTCTACTAGCAGCCTACGCAGCCCTACAAGGGCGGCCATGGCGTCCCTCGCGGCGGACTTTTTCC
GGTTACGATTCGGAGAGCAGCGGCGACGACGCCGAGACTAGCGGGTCAGATGATCAGGACACTAGTATCGTTACA
GTCCAGAGCCTGAGTAAATGTCTGGGTCGAAAAGACATCACCGAAGACTCAATGCGCCAGGCAATGTTTCGATAT
GCCTTGTACCTGAGCTACTTGCACGACGGGAAAGGAGAGGCACCACAATTGTGGGTTTTCAAAACAAATCTTTGG
GCTGACAAGGCGTGA
Transcript >OphauB2|5281
ATGGGGTCTTGTCAGCATAATCAAATGCCCCTCTTGTATGCCACGAGCGCCATGGACAAGCTTCCTACAGAATTG
CTTCTTGAAATTGTGGCATATCTGCCCCCATCGTCCCGCAAAAACGCTCGTCTTGCATCACGCCGCTTTTACGCC
CTTCTCTGGAGATACTCTTACCGCACTCTTCCCTCCTTCTTCAACCCAGCCTCAGCCATTGACAGGCTCGAGGAG
ACGCTCGCCCACCTTTCTCCACGACCAGCGTGCGTCTGGTCGCCCCGGTGCGGGGTGCCAGATCAACTGCCCGTG
CCTCAGAGTTTTCTACTAGCAGCCTACGCAGCCCTACAAGGGCGGCCATGGCGTCCCTCGCGGCGGACTTTTTCC
GGTTACGATTCGGAGAGCAGCGGCGACGACGCCGAGACTAGCGGGTCAGATGATCAGGACACTAGTATCGTTACA
GTCCAGAGCCTGAGTAAATGTCTGGGTCGAAAAGACATCACCGAAGACTCAATGCGCCAGGCAATGTTTCGATAT
GCCTTGTACCTGAGCTACTTGCACGACGGGAAAGGAGAGGCACCACAATTGTGGGTTTTCAAAACAAATCTTTGG
GCTGACAAGGCGTGA
Gene >OphauB2|5281
ATGGGGTCTTGTCAGCATAATCAAGTCTGCTCATTCTAAACTTGAAGCATCTTGTACTTTTACTGAGCGTGGAGC
TTCAGATGCCCCTCTTGTATGCCACGAGCGCCATGGACAAGCTTCCTACAGAATTGCTTCTTGAAATTGTGGCAT
ATCTGCCCCCATCGTCCCGCAAAAACGCTCGTCTTGCATCACGCCGCTTTTACGCCCTTCTCTGGAGATACTCTT
ACCGCACTCTTCCCTCCTTCTTCAACCCAGCCTCAGCCATTGACAGGCTCGAGGAGACGCTCGCCCACCTTTCTC
CACGACCAGCGTGCGTCTGGTCGCCCCGGTGCGGGGTGCCAGATCAACTGCCCGTGCCTCAGAGTTTTCTACTAG
CAGCCTACGCAGCCCTACAAGGGCGGCCATGGCGTCCCTCGCGGCGGACTTTTTCCGGTTACGATTCGGAGAGCA
GCGGCGACGACGCCGAGACTAGCGGGTCAGATGATCAGGACACTAGTATCGTTACAGTCCAGAGCCTGAGTAAAT
GTCTGGGTCGAAAAGACATCACCGAAGACTCAATGCGCCAGGCAATGTTTCGATATGCCTTGTACCTGAGCTACT
TGCACGACGGGAAAGGAGAGGCACCACAATTGTGGGTTTTCAAAACAAATCTTTGGGCTGACAAGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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