Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|528
Gene name
Location	Contig_109:59815..62767
Strand	+
Gene length (bp)	2952
Transcript length (bp)	2754
Coding sequence length (bp)	2754
Protein length (aa)	918

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04121	Nup84_Nup100	Nuclear pore protein 84 / 107	2.8E-161	103	883

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|G0SER9\|NUP84_CHATD	Nucleoporin NUP84 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=NUP84 PE=3 SV=1	13	917	0.0E+00
sp\|Q10331\|NU107_SCHPO	Nucleoporin nup107 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nup107 PE=1 SV=4	38	876	2.0E-35
sp\|Q8BH74\|NU107_MOUSE	Nuclear pore complex protein Nup107 OS=Mus musculus GN=Nup107 PE=1 SV=1	105	595	3.0E-12
sp\|P52590\|NU107_RAT	Nuclear pore complex protein Nup107 OS=Rattus norvegicus GN=Nup107 PE=1 SV=1	105	595	4.0E-12
sp\|P57740\|NU107_HUMAN	Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1	105	457	2.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|G0SER9\|NUP84_CHATD	Nucleoporin NUP84 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=NUP84 PE=3 SV=1	13	917	0.0E+00
sp\|Q10331\|NU107_SCHPO	Nucleoporin nup107 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nup107 PE=1 SV=4	38	876	2.0E-35
sp\|Q8BH74\|NU107_MOUSE	Nuclear pore complex protein Nup107 OS=Mus musculus GN=Nup107 PE=1 SV=1	105	595	3.0E-12
sp\|P52590\|NU107_RAT	Nuclear pore complex protein Nup107 OS=Rattus norvegicus GN=Nup107 PE=1 SV=1	105	595	4.0E-12
sp\|P57740\|NU107_HUMAN	Nuclear pore complex protein Nup107 OS=Homo sapiens GN=NUP107 PE=1 SV=1	105	457	2.0E-11
sp\|P52891\|NUP84_YEAST	Nucleoporin NUP84 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP84 PE=1 SV=1	316	683	2.0E-08

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GO

GO Term	Description	Terminal node
GO:0005643	nuclear pore	Yes
GO:0017056	structural constituent of nuclear pore	Yes
GO:0032991	protein-containing complex	No
GO:0003674	molecular_function	No
GO:0005198	structural molecule activity	No
GO:0140513	nuclear protein-containing complex	No
GO:0005575	cellular_component	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 37	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|528 MSLTVNQDMEDDNVEEVKPEVETRPGPHVEEFANYVDLCIAPSLSVSERKARVLELPRKFHDNANRRLLQKKHRR VADGSGDIDMDSERWSPSFTAEELEEVDQLEKEVQTWDLVRRLLPLRFAKSRAGAPRLSLEASKHPTLRDLAETD PILKERRAVLQWLQVTASSGPDIDELARELQQSADRGDIIAHGWLHTRSSIKLRKSVTAWPHLLDRQTRGILNSH VNADGAPLVTQLDPDAATRQERKLEPRDEFFERSIWLGCFEHLRRGSSLKTIREWCQERTEMWRAVSASGVLLAA DGKDSMADAPPESLVLWRRVCLSLSRNIGSDNYERAVYGILSGDISSVESVAKSWNDHLFANYNALVRARIDSFI LGRCSPEAVSTLSQSFSSFDPQQLQGDDAGFAKRLVKSLENREDTRQEAMQPYKALQAALIADDTDAYLRAQGSL LAEAAQNDRPLGNFSPSPLSKPADCSREKLFGSGQHEGLRVVTHVHVLLTLMRCLDASEGKTLSLGSGFETVGQE QVIAAYTDYLQNSGLEALIPLYCSILKPPMQYEVLGNNMIKEGDAETRLLQLRLMRKVGIDSLQFTETLARLVLD QLVLTAKVTFPSNPICILAEGPPSARYGRAILPDFLVRSGKEMTVKDEHVIRSLEWLLQVQAAWPEVARIGEQAY KFFFTNRCLVAVSNLVKRIKFSSLIGNMMDDAEALPDTNMLEDVEFVREKLQHIGASGASAEQVKVNLRNFHDFE ALAAALDGLETISSAMQLQLIEPPENQKDILRIAANEGPDLKTSMQPLMHSWGVASMQAGDKELGDIRQAYLPEV ILAFVSALHFMGNNLSRDHLLEAMDLAALVAERESDVAQVFIKSKRMTELVESFAACSKALAVVTGEKRAAGSSS KKLREMGWSRDIWVVKN*
Coding	>OphauB2\|528 ATGTCGCTCACGGTTAACCAAGACATGGAGGATGACAATGTGGAAGAAGTAAAGCCAGAAGTCGAGACAAGGCCG GGGCCTCACGTCGAAGAATTTGCCAATTATGTCGATCTCTGCATCGCCCCAAGCCTGAGTGTGTCGGAAAGGAAA GCGCGGGTGCTGGAACTTCCTCGCAAGTTTCACGACAATGCAAATCGTCGGCTACTCCAAAAGAAACACAGGCGC GTGGCCGACGGTAGCGGAGACATTGATATGGACTCGGAGAGATGGTCTCCTAGCTTCACTGCGGAAGAGCTCGAG GAAGTTGACCAACTTGAAAAAGAAGTTCAGACGTGGGACCTTGTTCGCCGGCTGCTGCCGCTGAGGTTTGCCAAG TCGCGAGCTGGGGCTCCTCGCTTGTCCTTGGAAGCCTCGAAGCATCCGACTCTGCGCGACTTGGCTGAGACTGAC CCCATTCTCAAGGAACGCCGTGCTGTTTTGCAGTGGCTACAGGTGACTGCGTCATCGGGCCCTGATATCGACGAA CTGGCTCGCGAGCTGCAACAGAGCGCTGACCGAGGCGACATTATTGCCCATGGCTGGCTTCACACCCGCTCATCA ATAAAGCTTCGGAAAAGCGTGACGGCATGGCCTCATTTGCTGGATCGGCAGACTCGTGGCATTTTGAATTCCCAC GTCAATGCGGATGGAGCGCCTCTAGTCACCCAGCTGGACCCAGACGCCGCTACCCGGCAGGAACGCAAACTTGAG CCTCGAGACGAATTCTTTGAGCGCTCAATATGGCTGGGCTGCTTTGAGCATCTTCGCCGCGGCAGCAGCCTCAAG ACGATTCGCGAATGGTGTCAAGAGCGAACCGAAATGTGGCGGGCCGTCTCTGCGTCGGGTGTGCTTCTTGCTGCC GACGGCAAGGACTCCATGGCCGACGCGCCTCCCGAGTCACTGGTGCTGTGGCGACGCGTGTGCCTCAGTCTATCT CGCAATATTGGCTCGGATAATTATGAGCGCGCAGTCTATGGTATTCTGTCTGGAGACATTTCCAGTGTGGAAAGC GTGGCAAAGAGCTGGAATGACCACTTGTTTGCCAACTATAATGCCCTTGTTCGTGCGCGCATCGATTCCTTTATA CTGGGTAGATGCTCGCCCGAAGCAGTCTCGACGCTGTCGCAGTCGTTTTCCTCCTTTGATCCTCAACAGCTCCAA GGCGACGATGCAGGCTTTGCTAAGCGGCTGGTCAAAAGTCTAGAAAATCGAGAGGACACCAGACAAGAGGCAATG CAGCCGTACAAGGCGTTACAGGCTGCACTCATTGCTGACGACACAGACGCCTACCTTCGCGCACAGGGCTCACTC TTGGCTGAGGCGGCCCAAAATGACAGGCCCTTGGGCAATTTTAGCCCAAGTCCACTGTCCAAGCCAGCCGATTGC AGCCGAGAAAAGTTGTTTGGCTCAGGGCAACACGAGGGCTTGAGGGTTGTCACTCACGTCCATGTTCTCCTGACC CTAATGCGATGCTTGGATGCTTCGGAAGGTAAGACACTGTCATTGGGCTCCGGCTTTGAGACGGTGGGCCAGGAG CAAGTCATTGCCGCGTACACGGACTACTTGCAAAACTCGGGGCTCGAAGCTCTCATCCCACTCTACTGTTCCATC CTCAAGCCACCTATGCAGTACGAAGTCCTTGGCAACAACATGATCAAGGAAGGAGACGCAGAAACACGCCTTCTT CAGCTCCGGCTCATGAGAAAAGTTGGCATTGACTCTCTACAATTCACCGAGACGCTGGCCAGGCTTGTTCTCGAC CAGCTTGTATTGACGGCAAAGGTGACATTTCCCTCGAATCCCATTTGCATACTGGCAGAGGGCCCGCCTAGCGCA CGGTATGGACGAGCCATCTTGCCCGACTTTTTGGTCCGCAGCGGCAAGGAGATGACGGTCAAGGACGAGCACGTT ATTCGTTCGCTCGAGTGGCTGCTCCAAGTCCAGGCTGCCTGGCCTGAAGTGGCTCGTATTGGAGAACAAGCATAC AAGTTCTTTTTCACAAACAGGTGCCTTGTGGCAGTCAGCAACCTGGTGAAGCGCATCAAGTTTAGTAGTTTAATT GGAAACATGATGGATGATGCTGAGGCGCTTCCCGATACAAACATGTTGGAAGACGTTGAATTCGTGCGGGAGAAG CTGCAGCATATTGGCGCCTCGGGCGCCTCTGCAGAGCAAGTCAAGGTGAACCTGCGAAATTTTCACGACTTTGAG GCTTTGGCCGCAGCGCTCGACGGCCTTGAGACAATCAGCTCTGCAATGCAGCTGCAGTTGATAGAACCACCTGAA AATCAAAAGGACATCTTGAGGATAGCTGCAAACGAGGGCCCCGACTTGAAAACCAGTATGCAACCATTGATGCAT AGCTGGGGAGTAGCAAGCATGCAAGCGGGCGACAAGGAGTTGGGAGATATTCGGCAGGCCTACCTGCCCGAGGTG ATTTTGGCATTTGTGAGTGCGCTGCACTTTATGGGCAATAACCTCTCGCGAGACCACTTGCTGGAAGCCATGGAT TTAGCAGCCCTGGTGGCAGAGCGAGAGTCGGACGTGGCGCAAGTTTTTATTAAGAGCAAGCGCATGACGGAGCTT GTTGAGTCGTTTGCCGCATGTAGCAAAGCGCTGGCAGTGGTGACGGGAGAGAAGAGGGCGGCAGGATCAAGCAGC AAGAAGCTGCGCGAGATGGGCTGGTCGCGCGATATCTGGGTTGTCAAGAATTAA
Transcript	>OphauB2\|528 ATGTCGCTCACGGTTAACCAAGACATGGAGGATGACAATGTGGAAGAAGTAAAGCCAGAAGTCGAGACAAGGCCG GGGCCTCACGTCGAAGAATTTGCCAATTATGTCGATCTCTGCATCGCCCCAAGCCTGAGTGTGTCGGAAAGGAAA GCGCGGGTGCTGGAACTTCCTCGCAAGTTTCACGACAATGCAAATCGTCGGCTACTCCAAAAGAAACACAGGCGC GTGGCCGACGGTAGCGGAGACATTGATATGGACTCGGAGAGATGGTCTCCTAGCTTCACTGCGGAAGAGCTCGAG GAAGTTGACCAACTTGAAAAAGAAGTTCAGACGTGGGACCTTGTTCGCCGGCTGCTGCCGCTGAGGTTTGCCAAG TCGCGAGCTGGGGCTCCTCGCTTGTCCTTGGAAGCCTCGAAGCATCCGACTCTGCGCGACTTGGCTGAGACTGAC CCCATTCTCAAGGAACGCCGTGCTGTTTTGCAGTGGCTACAGGTGACTGCGTCATCGGGCCCTGATATCGACGAA CTGGCTCGCGAGCTGCAACAGAGCGCTGACCGAGGCGACATTATTGCCCATGGCTGGCTTCACACCCGCTCATCA ATAAAGCTTCGGAAAAGCGTGACGGCATGGCCTCATTTGCTGGATCGGCAGACTCGTGGCATTTTGAATTCCCAC GTCAATGCGGATGGAGCGCCTCTAGTCACCCAGCTGGACCCAGACGCCGCTACCCGGCAGGAACGCAAACTTGAG CCTCGAGACGAATTCTTTGAGCGCTCAATATGGCTGGGCTGCTTTGAGCATCTTCGCCGCGGCAGCAGCCTCAAG ACGATTCGCGAATGGTGTCAAGAGCGAACCGAAATGTGGCGGGCCGTCTCTGCGTCGGGTGTGCTTCTTGCTGCC GACGGCAAGGACTCCATGGCCGACGCGCCTCCCGAGTCACTGGTGCTGTGGCGACGCGTGTGCCTCAGTCTATCT CGCAATATTGGCTCGGATAATTATGAGCGCGCAGTCTATGGTATTCTGTCTGGAGACATTTCCAGTGTGGAAAGC GTGGCAAAGAGCTGGAATGACCACTTGTTTGCCAACTATAATGCCCTTGTTCGTGCGCGCATCGATTCCTTTATA CTGGGTAGATGCTCGCCCGAAGCAGTCTCGACGCTGTCGCAGTCGTTTTCCTCCTTTGATCCTCAACAGCTCCAA GGCGACGATGCAGGCTTTGCTAAGCGGCTGGTCAAAAGTCTAGAAAATCGAGAGGACACCAGACAAGAGGCAATG CAGCCGTACAAGGCGTTACAGGCTGCACTCATTGCTGACGACACAGACGCCTACCTTCGCGCACAGGGCTCACTC TTGGCTGAGGCGGCCCAAAATGACAGGCCCTTGGGCAATTTTAGCCCAAGTCCACTGTCCAAGCCAGCCGATTGC AGCCGAGAAAAGTTGTTTGGCTCAGGGCAACACGAGGGCTTGAGGGTTGTCACTCACGTCCATGTTCTCCTGACC CTAATGCGATGCTTGGATGCTTCGGAAGGTAAGACACTGTCATTGGGCTCCGGCTTTGAGACGGTGGGCCAGGAG CAAGTCATTGCCGCGTACACGGACTACTTGCAAAACTCGGGGCTCGAAGCTCTCATCCCACTCTACTGTTCCATC CTCAAGCCACCTATGCAGTACGAAGTCCTTGGCAACAACATGATCAAGGAAGGAGACGCAGAAACACGCCTTCTT CAGCTCCGGCTCATGAGAAAAGTTGGCATTGACTCTCTACAATTCACCGAGACGCTGGCCAGGCTTGTTCTCGAC CAGCTTGTATTGACGGCAAAGGTGACATTTCCCTCGAATCCCATTTGCATACTGGCAGAGGGCCCGCCTAGCGCA CGGTATGGACGAGCCATCTTGCCCGACTTTTTGGTCCGCAGCGGCAAGGAGATGACGGTCAAGGACGAGCACGTT ATTCGTTCGCTCGAGTGGCTGCTCCAAGTCCAGGCTGCCTGGCCTGAAGTGGCTCGTATTGGAGAACAAGCATAC AAGTTCTTTTTCACAAACAGGTGCCTTGTGGCAGTCAGCAACCTGGTGAAGCGCATCAAGTTTAGTAGTTTAATT GGAAACATGATGGATGATGCTGAGGCGCTTCCCGATACAAACATGTTGGAAGACGTTGAATTCGTGCGGGAGAAG CTGCAGCATATTGGCGCCTCGGGCGCCTCTGCAGAGCAAGTCAAGGTGAACCTGCGAAATTTTCACGACTTTGAG GCTTTGGCCGCAGCGCTCGACGGCCTTGAGACAATCAGCTCTGCAATGCAGCTGCAGTTGATAGAACCACCTGAA AATCAAAAGGACATCTTGAGGATAGCTGCAAACGAGGGCCCCGACTTGAAAACCAGTATGCAACCATTGATGCAT AGCTGGGGAGTAGCAAGCATGCAAGCGGGCGACAAGGAGTTGGGAGATATTCGGCAGGCCTACCTGCCCGAGGTG ATTTTGGCATTTGTGAGTGCGCTGCACTTTATGGGCAATAACCTCTCGCGAGACCACTTGCTGGAAGCCATGGAT TTAGCAGCCCTGGTGGCAGAGCGAGAGTCGGACGTGGCGCAAGTTTTTATTAAGAGCAAGCGCATGACGGAGCTT GTTGAGTCGTTTGCCGCATGTAGCAAAGCGCTGGCAGTGGTGACGGGAGAGAAGAGGGCGGCAGGATCAAGCAGC AAGAAGCTGCGCGAGATGGGCTGGTCGCGCGATATCTGGGTTGTCAAGAATTAA
Gene	>OphauB2\|528 ATGTCGCTCACGGTTAACCAAGACATGGAGGATGACAATGTGGAAGAAGTAAAGCCAGAAGTCGAGACAAGGCCG GGGCCTCACGTCGAAGAATTTGCCAATTATGTCGATCTCTGCATCGCCCCAAGCCTGAGTGTGTCGGAAAGGAAA GCGCGGGTGCTGGAACTTCCTCGCAAGTTTCACGACAATGCAAATCGTCGGCTACTCCAAAAGAAACACAGGCGC GTGGCCGACGGTAGCGGAGACATTGATATGGACTCGGAGAGATGGTCTCCTAGCTTCACTGCGGAAGAGCTCGAG GAAGTTGACCAACTTGAAAAAGAAGTTCAGACGTGGGACCTTGTTCGCCGGCTGCTGCCGCTGAGGTTTGCCAAG TCGCGAGCTGGGGCTCCTCGCTTGTCCTTGGAAGCCTCGAAGCATCCGACTCTGCGCGACTTGGCTGAGACTGAC CCCATTCTCAAGGAACGCCGTGCTGTTTTGCAGTGGCTACAGGTGACTGCGTCATCGGGCCCTGATATCGACGAA CTGGCTCGCGAGCTGCAACAGAGCGCTGACCGAGGCGACATTATTGCCCATGGCTGGCTTCACACCCGCTCATCA ATAAAGCTTCGGAAAAGCGTGACGGCATGGCCTCATTTGCTGGATCGGCAGACTCGTGGCATTTTGAATTCCCAC GTCAATGCGGATGGAGCGCCTCTAGTCACCCAGCTGGACCCAGACGCCGCTACCCGGCAGGAACGCAAACTTGAG CCTCGAGACGAATTCTTTGAGCGCTCAATATGGCTGGGCTGCTTTGAGCATCTTCGCCGCGGCAGCAGCCTCAAG ACGATTCGCGAATGGTGTCAAGAGCGAACCGAAATGTGGCGGGCCGTCTCTGCGTCGGGTGTGCTTCTTGCTGCC GACGGCAAGGACTCCATGGCCGACGCGCCTCCCGAGTCACTGGTGCTGTGGCGACGCGTGTGCCTCAGTCTATCT CGCAATATTGGCTCGGATAATTATGAGCGCGCAGTCTATGGTATTCTGTCTGGAGACATTTCCAGTGTGGAAAGC GTGGCAAAGAGCTGGAATGACCACTTGTTTGCCAACTATAATGCCCTTGTTCGTGCGCGCATCGATTCCTTTATA CTGGGTAGATGCTCGCCCGAAGCAGTCTCGACGCTGTCGCAGTCGTTTTCCTCCTTTGATCCTCAACAGCTCCAA GGCGACGATGCAGGCTTTGCTAAGCGGCTGGTCAAAAGTCTAGAAAATCGAGAGGACACCAGACAAGAGGCAATG CAGCCGTACAAGGCGTTACAGGCTGCACTCATTGCTGACGACACAGACGCCTACCTTCGCGCACAGGGCTCACTC TTGGCTGAGGCGGCCCAAAATGACAGGCCCTTGGGCAATTTTAGCCCAAGTCCACTGTCCAAGCCAGCCGATTGC AGCCGAGAAAAGTTGTTTGGCTCAGGGCAACACGAGGGCTTGAGGGTTGTCACTCACGTCCATGTTCTCCTGACC CTAATGCGATGCTTGGATGCTTCGGAAGGTAAGACACTGTCATTGGGCTCCGGCTTTGAGACGGTGGGCCAGGAG CAAGTCATTGCCGCGTACACGGACTACTTGCAAAACTCGGGGCTCGAAGCTCTCATCCCACTCTACTGTTCCATC CTCAAGCCACCTATGCAGTACGAAGTCCTTGGCAACAACATGATCAAGGAAGGAGACGCAGAAACACGCCTTCTT CAGCTCCGGCTCATGAGAAAAGTTGGCATTGACTCTCTACAATTCACCGAGACGCTGGCCAGGCTTGTTCTCGAC CAGCTTGTATTGACGGCAAAGGTGACATTTCCCTCGAATCCCATTTGCATACTGGCAGAGGGCCCGCCTAGCGCA CGGTATGGACGAGCCATCTTGCCCGACTTTTTGGTCCGCAGCGGCAAGGAGATGACGGTCAAGGACGAGCACGTT ATTCGTTCGCTCGAGTGGCTGCTCCAAGTCCAGGCTGCCTGGCCTGAAGTGGCTCGTATTGGAGAACAAGCATAC AAGTTCTTTTTCAGTGAGTGGACTCATCAAGTGTGACGACAGTATTTGCCGTGCTGATTTTTTCTCTTTTTTTTT TTTTTTTTGCCAACAGCAAACAGGTGCCTTGTGGCAGTCAGCAACCTGGTGAAGCGCATCAAGTTTAGTAGTTTA ATTGGAAACATGATGGATGATGCTGAGGCGCTTCCCGATACAAACATGTTGGAAGACGTTGAATTCGTGCGGGAG AAGCTGCAGCATATTGGCGCCTCGGGCGCCTCTGCAGAGCAAGTCAAGGTGAACCTGCGAAATTTTCACGACTTT GAGGCTTTGGCCGCAGCGCTCGACGGCCTTGAGACAATCAGCTCTGCAATGCAGCTGCAGTTGATGTGTGTGCAA TGCATTCATGCTCATGGAACAAGTGAGAGACAGGAGCTGACAAAATGAGGTGCAGAGAACCACCTGAAAATCAAA AGGACATCTTGAGGATAGCTGCAAACGAGGGCCCCGACTTGAAAACCAGTATGCAACCATTGATGCATAGCTGGG GAGTAGCAAGCATGCAAGGTATGTCTTGTCGAGGCCACAACTTGTGAGATGCATTTACTGACGAGGAGAGCAGCG GGCGACAAGGAGTTGGGAGATATTCGGCAGGCCTACCTGCCCGAGGTGATTTTGGCATTTGTGAGTGCGCTGCAC TTTATGGGCAATAACCTCTCGCGAGACCACTTGCTGGAAGCCATGGATTTAGCAGCCCTGGTGGCAGAGCGAGAG TCGGACGTGGCGCAAGTTTTTATTAAGAGCAAGCGCATGACGGAGCTTGTTGAGTCGTTTGCCGCATGTAGCAAA GCGCTGGCAGTGGTGACGGGAGAGAAGAGGGCGGCAGGATCAAGCAGCAAGAAGCTGCGCGAGATGGGCTGGTCG CGCGATATCTGGGTTGTCAAGAATTAA

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