© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5266 |
| Gene name | |
| Location | Contig_4:169579..172053 |
| Strand | - |
| Gene length (bp) | 2474 |
| Transcript length (bp) | 2397 |
| Coding sequence length (bp) | 2397 |
| Protein length (aa) | 799 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04734 | Ceramidase_alk | Neutral/alkaline non-lysosomal ceramidase, N-terminal | 2.7E-216 | 94 | 625 |
| PF17048 | Ceramidse_alk_C | Neutral/alkaline non-lysosomal ceramidase, C-terminal | 1.3E-55 | 632 | 797 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q304B9|NCASE_ARATH | Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 | 94 | 778 | 3.0E-157 |
| sp|Q9JHE3|ASAH2_MOUSE | Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 | 34 | 797 | 1.0E-145 |
| sp|Q9NR71|ASAH2_HUMAN | Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 | 94 | 797 | 5.0E-144 |
| sp|Q0JL46|NCASE_ORYSJ | Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 | 94 | 797 | 9.0E-139 |
| sp|Q91XT9|ASAH2_RAT | Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 | 84 | 797 | 2.0E-138 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q304B9|NCASE_ARATH | Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=3 SV=1 | 94 | 778 | 3.0E-157 |
| sp|Q9JHE3|ASAH2_MOUSE | Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 | 34 | 797 | 1.0E-145 |
| sp|Q9NR71|ASAH2_HUMAN | Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 | 94 | 797 | 5.0E-144 |
| sp|Q0JL46|NCASE_ORYSJ | Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 | 94 | 797 | 9.0E-139 |
| sp|Q91XT9|ASAH2_RAT | Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 | 84 | 797 | 2.0E-138 |
| sp|Q29C43|NCASE_DROPS | Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1 | 94 | 797 | 2.0E-138 |
| sp|Q9VA70|NCASE_DROME | Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1 | 94 | 797 | 7.0E-138 |
| sp|Q5W7F1|ASAH2_DANRE | Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 | 37 | 797 | 1.0E-132 |
| sp|Q55G11|NCSEB_DICDI | Neutral ceramidase B OS=Dictyostelium discoideum GN=dcd2B PE=3 SV=1 | 94 | 797 | 2.0E-127 |
| sp|Q54BK2|NCSEA_DICDI | Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1 | 94 | 797 | 1.0E-124 |
| sp|Q9I596|NCASE_PSEAE | Neutral ceramidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0845 PE=1 SV=1 | 94 | 777 | 1.0E-93 |
| sp|O06769|NCASE_MYCTU | Neutral ceramidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0669c PE=1 SV=1 | 96 | 797 | 1.0E-79 |
| sp|P0C7U1|ASA2B_HUMAN | Putative inactive neutral ceramidase B OS=Homo sapiens GN=ASAH2B PE=2 SV=1 | 649 | 797 | 3.0E-19 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 52 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5266 MAPGPAKASRGWRDEGPTTRTPWRSLRLCRTHCLGFGLVLLLASLLALVRAPAWTNQGLLSSHPDVQGADATTES SNAWAGHQLPPGHWPHDRFLVGTGKADITGPVVELNMMGYADVKQVGSGVRQRLYSRAFILGSLHHAQDRFVYLV LDIQSGDTAVRYGILRGLAALGPRYSMYGHDNIAVTATHSHSGPGAWLNYLLPQITSKGFDRQSYRAIVQGCILS IRRAHESLEPGSLTVGSTSVLGAGINRSMFAYLANPEAERARYNVSASHDGSVETDMTLLKLQRQSDGKNIGVLT WFPTHGTSMQANNTLITGDNKGLAADLFEKQVRGGVNETDSFVAGFSQANMGDVTPNVLGAWCNDGTGHSCRLED STCPDGRSNNCRARGPGRVNDDHGVSSCFEIAKRQYEGALRIYQSLSQEAPNVRGDGVKAFHHFQDMSTFRFTLP NGTAVRTCPAALGYSFGAGTWDEPGRFDLVQHLSAKTKSSPVWSALTWMLKTPGPEQVECQHPKSVLLDVGEVKR PYEWTPNIVDIQTLRVGQFIIIVSPGEATTMAGRRWKEAVAKESIKVLQHELQGQDPVVVLGAPSNSYTHYITTE EEYGIQRYEGASTLYGKHTLAAYINRSLVSLEYLRAQGAPSREALGPRVLPPDNSNRSLSLIAGVVYDRTPWSLH FGDVVSDVARRELQRGETARATFVGANPRNNLRLEQTYAAVEQWQSEENKWRRVRDDSDWELTFNWRRTNKLLGT SEATVAWRIEPWAAAGEYRLRYYGDYKAALGRGRIVGFQGVSKVFRVG* |
| Coding | >OphauB2|5266 ATGGCACCGGGCCCGGCCAAGGCTAGTCGAGGCTGGCGTGACGAGGGCCCGACGACGAGGACGCCATGGCGGAGC TTGCGCCTGTGCCGCACCCACTGCCTCGGCTTTGGGCTCGTGTTGCTCCTCGCCAGCCTCTTGGCCCTGGTGCGA GCTCCTGCCTGGACCAACCAGGGCCTCCTTTCGTCGCACCCTGACGTGCAAGGCGCCGACGCCACCACAGAGTCG AGCAATGCCTGGGCAGGCCACCAATTGCCCCCTGGCCATTGGCCCCACGACCGCTTCCTGGTGGGCACCGGCAAG GCCGACATTACCGGGCCCGTTGTCGAGCTCAACATGATGGGCTACGCCGACGTGAAGCAAGTGGGCAGCGGCGTG CGCCAGCGCCTCTACTCGCGTGCCTTTATTCTTGGTAGTCTCCACCACGCCCAGGATCGCTTTGTCTACTTGGTG CTTGATATCCAGTCGGGCGACACGGCTGTTCGCTACGGCATCTTGCGGGGTCTGGCCGCCCTGGGCCCCCGCTAC TCCATGTATGGCCACGACAACATTGCCGTTACCGCTACCCACTCCCACTCTGGGCCTGGCGCCTGGCTCAACTAC TTGCTGCCTCAAATCACCAGCAAGGGCTTTGACCGCCAGAGCTATCGTGCAATTGTTCAAGGATGTATTTTGTCC ATTCGCCGCGCCCACGAGAGCCTCGAGCCCGGCTCGCTGACTGTGGGCTCCACAAGCGTTTTGGGCGCTGGCATC AATCGCAGCATGTTTGCCTACTTGGCCAATCCCGAGGCTGAGCGTGCTCGCTACAATGTCAGTGCCAGCCATGAC GGTTCCGTCGAGACGGACATGACGCTGCTCAAGCTTCAGCGCCAGTCGGATGGCAAGAATATTGGCGTCTTGACT TGGTTCCCCACCCACGGCACTTCAATGCAGGCCAACAATACCCTCATTACCGGCGACAACAAGGGCCTGGCTGCC GACTTGTTTGAGAAGCAAGTTCGCGGCGGTGTAAATGAGACGGACAGCTTTGTCGCTGGTTTCTCCCAGGCCAAC ATGGGCGATGTGACTCCCAATGTTCTCGGCGCCTGGTGCAACGACGGCACGGGACACAGCTGCCGATTAGAAGAT AGCACATGTCCCGACGGCCGCAGCAACAATTGCCGCGCCCGAGGGCCGGGCAGGGTCAATGACGACCACGGCGTG TCGTCGTGCTTTGAGATTGCCAAGCGGCAATACGAGGGCGCCCTGCGCATTTACCAGTCGTTGAGTCAAGAAGCG CCCAATGTGCGCGGTGACGGCGTCAAGGCCTTTCACCACTTTCAAGACATGTCGACGTTTCGCTTCACTCTCCCC AATGGCACGGCGGTCAGAACCTGCCCCGCTGCCCTTGGATACTCTTTTGGCGCGGGCACGTGGGACGAGCCGGGC AGATTTGACCTTGTCCAGCACCTGTCGGCCAAGACCAAGTCGTCGCCCGTGTGGTCGGCTCTCACGTGGATGCTC AAGACTCCTGGGCCAGAGCAGGTGGAATGCCAGCACCCCAAGTCTGTTCTTTTGGACGTGGGCGAGGTCAAGAGG CCCTATGAGTGGACCCCCAATATAGTGGATATCCAAACCCTGAGGGTTGGCCAGTTTATTATTATTGTGAGTCCG GGCGAGGCGACCACCATGGCTGGGCGCCGATGGAAAGAGGCTGTGGCCAAGGAGAGCATCAAGGTGCTGCAACAC GAGCTCCAAGGTCAAGATCCCGTGGTTGTCCTTGGTGCGCCGAGCAATAGCTATACGCACTATATTACAACCGAG GAGGAATACGGGATACAACGCTATGAAGGAGCATCTACACTCTATGGCAAGCACACGTTGGCCGCCTATATTAAT CGCAGTCTTGTGTCGCTTGAGTATTTGCGGGCTCAGGGGGCACCGTCACGCGAGGCTCTGGGCCCCAGAGTACTG CCGCCCGACAATAGCAATCGGTCGCTGAGCCTTATTGCTGGCGTCGTCTATGACCGTACACCGTGGTCTCTGCAT TTTGGAGACGTGGTGTCCGACGTGGCCAGACGGGAGCTGCAGCGCGGGGAGACGGCAAGAGCAACATTTGTGGGA GCCAATCCGCGCAACAACTTGCGGCTAGAGCAAACGTATGCGGCAGTGGAACAGTGGCAGTCGGAGGAAAACAAG TGGCGACGAGTGCGCGACGACTCTGACTGGGAATTGACGTTTAACTGGCGACGGACCAATAAGCTCTTGGGTACG AGTGAAGCGACTGTGGCGTGGCGGATTGAGCCCTGGGCAGCGGCGGGCGAATACCGACTGCGATATTATGGCGAC TACAAGGCTGCGCTCGGCAGAGGCCGGATTGTGGGCTTTCAAGGCGTCAGCAAGGTGTTTAGGGTGGGTTAG |
| Transcript | >OphauB2|5266 ATGGCACCGGGCCCGGCCAAGGCTAGTCGAGGCTGGCGTGACGAGGGCCCGACGACGAGGACGCCATGGCGGAGC TTGCGCCTGTGCCGCACCCACTGCCTCGGCTTTGGGCTCGTGTTGCTCCTCGCCAGCCTCTTGGCCCTGGTGCGA GCTCCTGCCTGGACCAACCAGGGCCTCCTTTCGTCGCACCCTGACGTGCAAGGCGCCGACGCCACCACAGAGTCG AGCAATGCCTGGGCAGGCCACCAATTGCCCCCTGGCCATTGGCCCCACGACCGCTTCCTGGTGGGCACCGGCAAG GCCGACATTACCGGGCCCGTTGTCGAGCTCAACATGATGGGCTACGCCGACGTGAAGCAAGTGGGCAGCGGCGTG CGCCAGCGCCTCTACTCGCGTGCCTTTATTCTTGGTAGTCTCCACCACGCCCAGGATCGCTTTGTCTACTTGGTG CTTGATATCCAGTCGGGCGACACGGCTGTTCGCTACGGCATCTTGCGGGGTCTGGCCGCCCTGGGCCCCCGCTAC TCCATGTATGGCCACGACAACATTGCCGTTACCGCTACCCACTCCCACTCTGGGCCTGGCGCCTGGCTCAACTAC TTGCTGCCTCAAATCACCAGCAAGGGCTTTGACCGCCAGAGCTATCGTGCAATTGTTCAAGGATGTATTTTGTCC ATTCGCCGCGCCCACGAGAGCCTCGAGCCCGGCTCGCTGACTGTGGGCTCCACAAGCGTTTTGGGCGCTGGCATC AATCGCAGCATGTTTGCCTACTTGGCCAATCCCGAGGCTGAGCGTGCTCGCTACAATGTCAGTGCCAGCCATGAC GGTTCCGTCGAGACGGACATGACGCTGCTCAAGCTTCAGCGCCAGTCGGATGGCAAGAATATTGGCGTCTTGACT TGGTTCCCCACCCACGGCACTTCAATGCAGGCCAACAATACCCTCATTACCGGCGACAACAAGGGCCTGGCTGCC GACTTGTTTGAGAAGCAAGTTCGCGGCGGTGTAAATGAGACGGACAGCTTTGTCGCTGGTTTCTCCCAGGCCAAC ATGGGCGATGTGACTCCCAATGTTCTCGGCGCCTGGTGCAACGACGGCACGGGACACAGCTGCCGATTAGAAGAT AGCACATGTCCCGACGGCCGCAGCAACAATTGCCGCGCCCGAGGGCCGGGCAGGGTCAATGACGACCACGGCGTG TCGTCGTGCTTTGAGATTGCCAAGCGGCAATACGAGGGCGCCCTGCGCATTTACCAGTCGTTGAGTCAAGAAGCG CCCAATGTGCGCGGTGACGGCGTCAAGGCCTTTCACCACTTTCAAGACATGTCGACGTTTCGCTTCACTCTCCCC AATGGCACGGCGGTCAGAACCTGCCCCGCTGCCCTTGGATACTCTTTTGGCGCGGGCACGTGGGACGAGCCGGGC AGATTTGACCTTGTCCAGCACCTGTCGGCCAAGACCAAGTCGTCGCCCGTGTGGTCGGCTCTCACGTGGATGCTC AAGACTCCTGGGCCAGAGCAGGTGGAATGCCAGCACCCCAAGTCTGTTCTTTTGGACGTGGGCGAGGTCAAGAGG CCCTATGAGTGGACCCCCAATATAGTGGATATCCAAACCCTGAGGGTTGGCCAGTTTATTATTATTGTGAGTCCG GGCGAGGCGACCACCATGGCTGGGCGCCGATGGAAAGAGGCTGTGGCCAAGGAGAGCATCAAGGTGCTGCAACAC GAGCTCCAAGGTCAAGATCCCGTGGTTGTCCTTGGTGCGCCGAGCAATAGCTATACGCACTATATTACAACCGAG GAGGAATACGGGATACAACGCTATGAAGGAGCATCTACACTCTATGGCAAGCACACGTTGGCCGCCTATATTAAT CGCAGTCTTGTGTCGCTTGAGTATTTGCGGGCTCAGGGGGCACCGTCACGCGAGGCTCTGGGCCCCAGAGTACTG CCGCCCGACAATAGCAATCGGTCGCTGAGCCTTATTGCTGGCGTCGTCTATGACCGTACACCGTGGTCTCTGCAT TTTGGAGACGTGGTGTCCGACGTGGCCAGACGGGAGCTGCAGCGCGGGGAGACGGCAAGAGCAACATTTGTGGGA GCCAATCCGCGCAACAACTTGCGGCTAGAGCAAACGTATGCGGCAGTGGAACAGTGGCAGTCGGAGGAAAACAAG TGGCGACGAGTGCGCGACGACTCTGACTGGGAATTGACGTTTAACTGGCGACGGACCAATAAGCTCTTGGGTACG AGTGAAGCGACTGTGGCGTGGCGGATTGAGCCCTGGGCAGCGGCGGGCGAATACCGACTGCGATATTATGGCGAC TACAAGGCTGCGCTCGGCAGAGGCCGGATTGTGGGCTTTCAAGGCGTCAGCAAGGTGTTTAGGGTGGGTTAG |
| Gene | >OphauB2|5266 ATGGCACCGGGCCCGGCCAAGGCTAGTCGAGGCTGGCGTGACGAGGGCCCGACGACGAGGACGCCATGGCGGAGC TTGCGCCTGTGCCGCACCCACTGCCTCGGCTTTGGGCTCGTGTTGCTCCTCGCCAGCCTCTTGGCCCTGGTGCGA GCTCCTGCCTGGACCAACCAGGGCCTCCTTTCGTCGCACCCTGACGTGCAAGGCGCCGACGCCACCACAGAGTCG AGCAATGCCTGGGCAGGCCACCAATTGCCCCCTGGCCATTGGCCCCACGACCGCTTCCTGGTGGGCACCGGCAAG GCCGACATTACCGGGCCCGTTGTCGAGCTCAACATGATGGGCTACGCCGACGTGAAGCAAGTGGGCAGCGGCGTG CGCCAGCGCCTCTACTCGCGTGCCTTTATTCTTGGTAGTCTCCACCACGCCCAGGATCGCTTTGTCTACTTGGTG CTTGATATCCAGTCGGGCGACACGGCTGTTCGCTACGGCATCTTGCGGGGTCTGGCCGCCCTGGGCCCCCGCTAC TCCATGTATGGCCACGACAACATTGCCGTTACCGCTACCCACTCCCACTCTGGGCCTGGCGCCTGGCTCAACTAC TTGCTGCCTCAAATCACCAGCAAGGGCTTTGACCGCCAGAGCTATCGTGCAATTGTTCAAGGATGTATTTTGTCC ATTCGCCGCGCCCACGAGAGCCTCGAGCCCGGCTCGCTGACTGTGGGCTCCACAAGCGTTTTGGGCGCTGGCATC AATCGCAGCATGTTTGCCTACTTGGCCAATCCCGAGGCTGAGCGTGCTCGCTACAATGTCAGTGCCAGCCATGAC GGTTCCGTCGAGACGGACATGACGCTGCTCAAGCTTCAGCGCCAGTCGGATGGCAAGAATATTGGCGTCTTGACT TGGTTCCCCACCCACGGCACTTCAATGCAGGCCAACAATACCCTCATTACCGGCGACAACAAGGGCCTGGCTGCC GACTTGTTTGAGAAGCAAGTTCGCGGCGGTGTAAATGAGACGGACAGCTTTGTCGCTGGTTTCTCCCAGGCCAAC ATGGGCGATGTGACTCCCAATGTTCTCGGCGCCTGGTGCAACGACGGCACGGGACACAGCTGCCGATTAGAAGAT AGCACATGTCCCGACGGCCGCAGCAACAATTGCCGCGCCCGAGGGCCGGGCAGGGTCAATGACGACCACGGCGTG TCGTCGTGCTTTGAGATTGCCAAGCGGCAATACGAGGGCGCCCTGCGCATTTACCAGTCGTTGAGTCAAGAAGCG CCCAATGTGCGCGGTGACGGCGTCAAGGCCTTTCACCACTTTCAAGACATGTCGACGTTTCGCTTCACTCTCCCC AATGGCACGGCGGTCAGAACCTGCCCCGCTGCCCTTGGATACTCTTTTGGCGCGGGCACGTGGGACGAGCCGGGC AGATTTGACCTTGTCCAGCACCTGTCGGCCAAGACCAAGTCGTCGCCCGTGTGGTCGGCTCTCACGTGGATGCTC AAGACTCCTGGGCCAGAGCAGGTGGAATGCCAGCACCCCAAGTCTGTTCTTTTGGACGTGGGCGAGGTCAAGAGG CCCTATGAGTGGACCCCCAATATAGTGGATATCCAAACCCTGAGGGTTGGCCAGTTTATTATTATTGTGAGTCCG GGCGAGGCGACCACCATGGCTGGGCGCCGATGGAAAGAGGCTGTGGCCAAGGAGAGCATCAAGGTGCTGCAACAC GAGCTCCAAGGTCAAGATCCCGTGGTTGTCCTTGGTGCGCCGAGCAATAGCTATACGCACTATATTACAACCGAG GAGGAATACGGGTGAGTCGTGTGCAAAAGCCGGCCTTGTGCGACGACGTGTAGTCTCTTGGTTCAAGGTTGCTCA TTTATTATTGCAGGATACAACGCTATGAAGGAGCATCTACACTCTATGGCAAGCACACGTTGGCCGCCTATATTA ATCGCAGTCTTGTGTCGCTTGAGTATTTGCGGGCTCAGGGGGCACCGTCACGCGAGGCTCTGGGCCCCAGAGTAC TGCCGCCCGACAATAGCAATCGGTCGCTGAGCCTTATTGCTGGCGTCGTCTATGACCGTACACCGTGGTCTCTGC ATTTTGGAGACGTGGTGTCCGACGTGGCCAGACGGGAGCTGCAGCGCGGGGAGACGGCAAGAGCAACATTTGTGG GAGCCAATCCGCGCAACAACTTGCGGCTAGAGCAAACGTATGCGGCAGTGGAACAGTGGCAGTCGGAGGAAAACA AGTGGCGACGAGTGCGCGACGACTCTGACTGGGAATTGACGTTTAACTGGCGACGGACCAATAAGCTCTTGGGTA CGAGTGAAGCGACTGTGGCGTGGCGGATTGAGCCCTGGGCAGCGGCGGGCGAATACCGACTGCGATATTATGGCG ACTACAAGGCTGCGCTCGGCAGAGGCCGGATTGTGGGCTTTCAAGGCGTCAGCAAGGTGTTTAGGGTGGGTTAG |