Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5257
Gene name
LocationContig_4:148039..149495
Strand+
Gene length (bp)1456
Transcript length (bp)1341
Coding sequence length (bp)1341
Protein length (aa) 447

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01008 IF-2B Initiation factor 2 subunit family 3.4E-45 39 423

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UT76|EI2BB_SCHPO Probable translation initiation factor eIF-2B subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif222 PE=1 SV=1 27 441 1.0E-48
sp|P32502|EI2BB_YEAST Translation initiation factor eIF-2B subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCD7 PE=1 SV=1 24 445 8.0E-42
sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1 217 437 1.0E-28
sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu rubripes GN=eif2b2 PE=3 SV=1 217 444 1.0E-26
sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus GN=EIF2B2 PE=2 SV=1 202 441 2.0E-25
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q9UT76|EI2BB_SCHPO Probable translation initiation factor eIF-2B subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif222 PE=1 SV=1 27 441 1.0E-48
sp|P32502|EI2BB_YEAST Translation initiation factor eIF-2B subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCD7 PE=1 SV=1 24 445 8.0E-42
sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1 217 437 1.0E-28
sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu rubripes GN=eif2b2 PE=3 SV=1 217 444 1.0E-26
sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus GN=EIF2B2 PE=2 SV=1 202 441 2.0E-25
sp|Q99LD9|EI2BB_MOUSE Translation initiation factor eIF-2B subunit beta OS=Mus musculus GN=Eif2b2 PE=1 SV=1 202 441 4.0E-25
sp|Q62818|EI2BB_RAT Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus GN=Eif2b2 PE=2 SV=1 202 441 4.0E-25
sp|Q28690|EI2BB_RABIT Translation initiation factor eIF-2B subunit beta OS=Oryctolagus cuniculus GN=EIF2B2 PE=1 SV=1 202 441 1.0E-24
sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens GN=EIF2B2 PE=1 SV=3 202 441 1.0E-24
sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1 22 104 1.0E-13
sp|Q54FM3|EI2BD_DICDI Translation initiation factor eIF-2B subunit delta OS=Dictyostelium discoideum GN=eif2b4 PE=3 SV=1 218 423 2.0E-13
sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu rubripes GN=eif2b2 PE=3 SV=1 24 120 4.0E-13
sp|Q3T058|EI2BD_BOVIN Translation initiation factor eIF-2B subunit delta OS=Bos taurus GN=EIF2B4 PE=2 SV=1 160 423 1.0E-12
sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens GN=EIF2B2 PE=1 SV=3 20 120 3.0E-12
sp|Q63186|EI2BD_RAT Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus GN=Eif2b4 PE=2 SV=1 218 423 8.0E-12
sp|Q61749|EI2BD_MOUSE Translation initiation factor eIF-2B subunit delta OS=Mus musculus GN=Eif2b4 PE=1 SV=2 218 423 1.0E-11
sp|Q99LD9|EI2BB_MOUSE Translation initiation factor eIF-2B subunit beta OS=Mus musculus GN=Eif2b2 PE=1 SV=1 20 120 2.0E-11
sp|Q28690|EI2BB_RABIT Translation initiation factor eIF-2B subunit beta OS=Oryctolagus cuniculus GN=EIF2B2 PE=1 SV=1 20 120 2.0E-11
sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus GN=EIF2B2 PE=2 SV=1 20 120 3.0E-11
sp|Q64270|EI2BA_RAT Translation initiation factor eIF-2B subunit alpha OS=Rattus norvegicus GN=Eif2b1 PE=2 SV=1 232 374 4.0E-11
sp|Q62818|EI2BB_RAT Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus GN=Eif2b2 PE=2 SV=1 20 120 1.0E-10
sp|Q0IIF2|EI2BA_BOVIN Translation initiation factor eIF-2B subunit alpha OS=Bos taurus GN=EIF2B1 PE=2 SV=1 232 374 1.0E-10
sp|Q54I81|EI2BA_DICDI Translation initiation factor eIF-2B subunit alpha OS=Dictyostelium discoideum GN=eif2b1 PE=3 SV=1 216 368 4.0E-10
sp|Q9V281|R15PI_PYRAB Ribose 1,5-bisphosphate isomerase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB01930 PE=3 SV=1 207 423 4.0E-10
sp|Q99LC8|EI2BA_MOUSE Translation initiation factor eIF-2B subunit alpha OS=Mus musculus GN=Eif2b1 PE=1 SV=1 232 374 7.0E-10
sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2 218 423 9.0E-10
sp|O28242|R15PI_ARCFU Ribose 1,5-bisphosphate isomerase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2037 PE=3 SV=1 214 422 1.0E-09
sp|P41111|EI2BD_RABIT Translation initiation factor eIF-2B subunit delta OS=Oryctolagus cuniculus GN=EIF2B4 PE=2 SV=2 228 423 1.0E-09
sp|Q8U4G6|R15PI_PYRFU Ribose 1,5-bisphosphate isomerase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2 207 423 2.0E-09
sp|O57947|R15PI_PYRHO Ribose 1,5-bisphosphate isomerase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0208 PE=3 SV=1 212 423 2.0E-09
sp|Q5RAR0|EI2BA_PONAB Translation initiation factor eIF-2B subunit alpha OS=Pongo abelii GN=EIF2B1 PE=2 SV=2 232 374 9.0E-09
sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens GN=EIF2B1 PE=1 SV=1 232 374 9.0E-09
sp|Q4R4V8|EI2BA_MACFA Translation initiation factor eIF-2B subunit alpha OS=Macaca fascicularis GN=EIF2B1 PE=2 SV=1 232 374 3.0E-08
sp|D4GV73|R15PI_HALVD Ribose 1,5-bisphosphate isomerase OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=HVO_0966 PE=1 SV=1 211 437 6.0E-08
sp|Q57586|R15PI_METJA Ribose 1,5-bisphosphate isomerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0122 PE=3 SV=1 218 437 8.0E-08
sp|Q5JFM9|R15PI_THEKO Ribose 1,5-bisphosphate isomerase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=TK0185 PE=1 SV=1 155 423 1.0E-07
sp|Q09924|EI2BD_SCHPO Probable translation initiation factor eIF-2B subunit delta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif224 PE=1 SV=1 228 423 5.0E-06
sp|O58185|EI2BL_PYRHO Putative translation initiation factor eIF-2B subunit 2-like OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0440 PE=1 SV=1 220 423 5.0E-06
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GO

GO Term Description Terminal node
GO:0044237 cellular metabolic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5257
MPSLSHSYAPDLEKYLKSLKGQQLEASIEKLIALLKRRQIRGSEACAIATTHILLQVVARSKWNDVDSLLQNVRD
TGRRLAQAQPHELVVGNIVRRVLALIRDEAAEDRNESQSESQSEAQMTPTESSPLRHWTATTVAKQDSSGDYVSG
SPATNQSFRPSLSTSLSAVSLPKTLFHLLSASSPTDGSAARSPSLRNSGTSTPTGKSHAVSSQVHTLRSEVIDGI
EEIKDEISQVDEQISSVADVQIHPGDRILVHQPSPTVERFLLRAAAKRKFTVYIAVEPPQRGASEPQSAPFREKL
LAMGIETINISGAGTMTFMPNISKVILGARAVVSNGGVVTDSGATILAEAAKAMGKPIIVLAGIYKFSPIEVPDA
NSVIEWGNPETYVDFDDGPMVKGVQVLHAVTELVPADYVDVYISNLGIHSRDHLAILVEDHYYQEDADFDL*
Coding >OphauB2|5257
ATGCCCTCTCTAAGCCATAGTTATGCGCCCGATCTCGAGAAATATCTCAAGTCTCTAAAAGGCCAGCAGTTGGAG
GCATCCATTGAGAAACTCATAGCGCTTCTCAAACGAAGACAAATTCGAGGATCCGAGGCCTGCGCCATTGCCACG
ACGCACATCTTGCTTCAAGTCGTGGCCCGCTCCAAATGGAACGACGTTGACAGCTTGCTGCAAAATGTCAGAGAC
ACTGGCCGTCGTCTAGCCCAAGCTCAGCCCCATGAGCTCGTTGTGGGCAATATTGTGCGCCGCGTGCTTGCCTTG
ATTCGGGATGAGGCAGCCGAGGATAGAAACGAGTCCCAGAGCGAATCACAGAGTGAAGCGCAAATGACGCCCACT
GAGTCATCACCCTTGCGACATTGGACAGCTACCACGGTGGCAAAGCAGGACTCGTCGGGCGATTATGTGTCGGGT
AGCCCAGCCACCAATCAGTCGTTTCGCCCGTCGCTCTCCACGTCGCTCAGTGCTGTTAGCCTGCCCAAGACGCTC
TTCCACCTACTCTCTGCATCCAGCCCTACCGATGGCTCTGCAGCTCGGAGCCCATCGCTTCGCAATTCGGGCACC
TCGACGCCAACTGGGAAAAGCCATGCAGTCTCGAGCCAAGTCCACACCCTGCGGTCCGAGGTGATTGACGGCATT
GAAGAAATCAAGGACGAGATTAGCCAGGTTGACGAGCAAATCTCTTCAGTGGCAGATGTGCAGATTCACCCTGGT
GATCGCATTCTTGTACATCAGCCGTCACCGACAGTGGAACGCTTCCTTTTGCGCGCAGCGGCCAAGCGCAAATTT
ACAGTCTACATTGCTGTAGAGCCACCCCAGAGAGGAGCCTCTGAGCCACAGAGTGCCCCGTTTCGGGAGAAACTG
CTGGCCATGGGCATCGAAACCATTAATATTTCTGGCGCAGGCACCATGACCTTTATGCCGAATATTAGCAAGGTT
ATCCTCGGTGCGCGGGCCGTTGTGTCTAATGGAGGCGTCGTGACAGACTCTGGAGCTACCATTTTGGCTGAAGCA
GCCAAGGCAATGGGCAAACCCATTATTGTTCTGGCCGGCATATACAAGTTTAGCCCAATCGAGGTACCCGATGCC
AACTCGGTCATTGAATGGGGCAATCCTGAGACATATGTGGATTTTGACGACGGCCCCATGGTCAAGGGTGTCCAA
GTTTTGCACGCCGTTACAGAACTTGTGCCTGCGGATTATGTTGATGTATACATTAGCAACTTAGGTATCCACTCA
CGAGACCATTTGGCGATTTTGGTGGAGGATCACTATTACCAAGAAGACGCCGACTTTGACTTGTAA
Transcript >OphauB2|5257
ATGCCCTCTCTAAGCCATAGTTATGCGCCCGATCTCGAGAAATATCTCAAGTCTCTAAAAGGCCAGCAGTTGGAG
GCATCCATTGAGAAACTCATAGCGCTTCTCAAACGAAGACAAATTCGAGGATCCGAGGCCTGCGCCATTGCCACG
ACGCACATCTTGCTTCAAGTCGTGGCCCGCTCCAAATGGAACGACGTTGACAGCTTGCTGCAAAATGTCAGAGAC
ACTGGCCGTCGTCTAGCCCAAGCTCAGCCCCATGAGCTCGTTGTGGGCAATATTGTGCGCCGCGTGCTTGCCTTG
ATTCGGGATGAGGCAGCCGAGGATAGAAACGAGTCCCAGAGCGAATCACAGAGTGAAGCGCAAATGACGCCCACT
GAGTCATCACCCTTGCGACATTGGACAGCTACCACGGTGGCAAAGCAGGACTCGTCGGGCGATTATGTGTCGGGT
AGCCCAGCCACCAATCAGTCGTTTCGCCCGTCGCTCTCCACGTCGCTCAGTGCTGTTAGCCTGCCCAAGACGCTC
TTCCACCTACTCTCTGCATCCAGCCCTACCGATGGCTCTGCAGCTCGGAGCCCATCGCTTCGCAATTCGGGCACC
TCGACGCCAACTGGGAAAAGCCATGCAGTCTCGAGCCAAGTCCACACCCTGCGGTCCGAGGTGATTGACGGCATT
GAAGAAATCAAGGACGAGATTAGCCAGGTTGACGAGCAAATCTCTTCAGTGGCAGATGTGCAGATTCACCCTGGT
GATCGCATTCTTGTACATCAGCCGTCACCGACAGTGGAACGCTTCCTTTTGCGCGCAGCGGCCAAGCGCAAATTT
ACAGTCTACATTGCTGTAGAGCCACCCCAGAGAGGAGCCTCTGAGCCACAGAGTGCCCCGTTTCGGGAGAAACTG
CTGGCCATGGGCATCGAAACCATTAATATTTCTGGCGCAGGCACCATGACCTTTATGCCGAATATTAGCAAGGTT
ATCCTCGGTGCGCGGGCCGTTGTGTCTAATGGAGGCGTCGTGACAGACTCTGGAGCTACCATTTTGGCTGAAGCA
GCCAAGGCAATGGGCAAACCCATTATTGTTCTGGCCGGCATATACAAGTTTAGCCCAATCGAGGTACCCGATGCC
AACTCGGTCATTGAATGGGGCAATCCTGAGACATATGTGGATTTTGACGACGGCCCCATGGTCAAGGGTGTCCAA
GTTTTGCACGCCGTTACAGAACTTGTGCCTGCGGATTATGTTGATGTATACATTAGCAACTTAGGTATCCACTCA
CGAGACCATTTGGCGATTTTGGTGGAGGATCACTATTACCAAGAAGACGCCGACTTTGACTTGTAA
Gene >OphauB2|5257
ATGCCCTCTCTAAGCCATAGTTATGCGCCCGATCTCGAGAAATATCTCAAGTCTCTAAAAGGCCAGCAGTTGGAG
GCATCCATTGAGAAACTCATAGCGTGAGTTTGTCGACTTGCTAGCTGCGCTTCACGGAACTGACTGGCTGCTTCC
CCGCTCAGGCTTCTCAAACGAAGACAAATTCGAGGATCCGAGGCCTGCGCCATTGCCACGACGCACATCTTGCTT
CAAGTCGTGGCCCGCTCCAAATGGAACGACGTTGACAGCTTGCTGCAAAATGTCAGAGACACTGGCCGTCGTCTA
GCCCAAGCTCAGCCCCATGAGCTCGTTGTGGGCAATATTGTGCGCCGCGTGCTTGCCTTGATTCGGGATGAGGCA
GCCGAGGATAGAAACGAGTCCCAGAGCGAATCACAGAGTGAAGCGCAAATGACGCCCACTGAGTCATCACCCTTG
CGACATTGGACAGCTACCACGGTGGCAAAGCAGGACTCGTCGGGCGATTATGTGTCGGGTAGCCCAGCCACCAAT
CAGTCGTTTCGCCCGTCGCTCTCCACGTCGCTCAGTGCTGTTAGCCTGCCCAAGACGCTCTTCCACCTACTCTCT
GCATCCAGCCCTACCGATGGCTCTGCAGCTCGGAGCCCATCGCTTCGCAATTCGGGCACCTCGACGCCAACTGGG
AAAAGCCATGCAGTCTCGAGCCAAGTCCACACCCTGCGGTCCGAGGTGATTGACGGCATTGAAGAAATCAAGGAC
GAGATTAGCCAGGTTGACGAGCAAATCTCTTCAGTGGCAGATGTGCAGATTCACCCTGGTGATCGCATTCTTGTA
CATCAGCCGTCACCGACAGTGGAACGCTTCCTTTTGCGCGCAGCGGCCAAGCGCAAATTTACAGTCTACATTGCT
GTAGAGCCACCCCAGAGAGGAGCCTCTGAGCCACAGAGTGCCCCGTTTCGGGAGAAACTGCTGGCCATGGGCATC
GAAACCATTAATATTTCTGGCGCAGGCACCATGACCTTTATGCCGAATATTAGCAAGGTTATCCTCGGTGCGCGG
GCCGTTGTGTCTAATGGAGGCGTCGTGACAGACTCTGGAGCTACCATTTTGGCTGAAGCAGCCAAGGCAATGGGC
AAACCCATTATTGTTCTGGCCGGCATATACAAGTTTAGCCCAATCGAGGTACCCGATGCCAACTCGGTCATTGAA
TGGGGCAATCCTGAGACATATGTGGATTTTGACGACGGCCCCATGGTCAAGGGTGTCCAAGTTTTGCACGCCGTT
ACAGAACTTGTGCCTGCGGATTATGTTGATGTATACATTAGCAACTTGTGAGTGCTCTGGCTACCAAGGTCTCAG
AGGATTGACATTCTAACCGATTTGCAGAGGTATCCACTCACGAGACCATTTGGCGATTTTGGTGGAGGATCACTA
TTACCAAGAAGACGCCGACTTTGACTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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