Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|5255
Gene name
Location	Contig_4:144089..144764
Strand	-
Gene length (bp)	675
Transcript length (bp)	453
Coding sequence length (bp)	453
Protein length (aa)	151

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08570	DUF1761	Protein of unknown function (DUF1761)	1.1E-25	13	139

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTI9\|YKZ2_SCHPO	UPF0591 membrane protein C15E1.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC15E1.02c PE=3 SV=1	2	145	1.0E-19

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	58	80	22
3	90	112	22
4	121	143	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|5255 MSLQYFPPVKPSAIALGALFNHSIELAVLSPVFGQTFRRAKQANTKEEFLRSREATSAAAAWGTSLVGAALQSYG VGALINATATFSYKGAAYLGGLIFAATSAPTFLVQVFNEKRPLDTVGVSVAAKLCETIGLSVFLVWWGTRTNPFD *
Coding	>OphauB2\|5255 ATGTCTCTCCAATACTTCCCTCCCGTCAAGCCCTCGGCCATTGCCCTTGGCGCCCTCTTCAACCACAGCATCGAG CTGGCGGTGCTGTCCCCCGTCTTTGGCCAGACGTTTCGCCGCGCAAAGCAGGCAAACACCAAGGAGGAGTTTTTG CGATCGCGCGAGGCGACTAGTGCCGCTGCGGCGTGGGGGACCTCGCTCGTGGGCGCCGCGCTGCAGAGCTATGGC GTTGGTGCCTTGATTAATGCCACGGCCACGTTTAGCTACAAGGGAGCTGCCTACCTTGGCGGTCTAATCTTTGCC GCCACTTCGGCCCCGACTTTCCTGGTGCAAGTTTTCAACGAAAAGAGGCCCCTCGACACGGTCGGAGTGAGCGTC GCCGCAAAGCTCTGCGAGACTATTGGCCTCTCCGTGTTCCTGGTTTGGTGGGGAACTCGCACCAACCCTTTTGAC TAG
Transcript	>OphauB2\|5255 ATGTCTCTCCAATACTTCCCTCCCGTCAAGCCCTCGGCCATTGCCCTTGGCGCCCTCTTCAACCACAGCATCGAG CTGGCGGTGCTGTCCCCCGTCTTTGGCCAGACGTTTCGCCGCGCAAAGCAGGCAAACACCAAGGAGGAGTTTTTG CGATCGCGCGAGGCGACTAGTGCCGCTGCGGCGTGGGGGACCTCGCTCGTGGGCGCCGCGCTGCAGAGCTATGGC GTTGGTGCCTTGATTAATGCCACGGCCACGTTTAGCTACAAGGGAGCTGCCTACCTTGGCGGTCTAATCTTTGCC GCCACTTCGGCCCCGACTTTCCTGGTGCAAGTTTTCAACGAAAAGAGGCCCCTCGACACGGTCGGAGTGAGCGTC GCCGCAAAGCTCTGCGAGACTATTGGCCTCTCCGTGTTCCTGGTTTGGTGGGGAACTCGCACCAACCCTTTTGAC TAG
Gene	>OphauB2\|5255 ATGTCTCTCCAATGTAAAATCCCTTCCCCCCCCTCCCCTTCCTCATCACTAACCCACTCCAGACTTCCCTCCCGT CAAGCCCTCGGCCATTGCCCTTGGCGCCCTCTTCAACCACAGCATCGAGCTGGCGGTGCTGTCCCCCGTCTTTGG CCAGACGTTTCGCCGCGCAAAGCAGGCAAACACCAAGGAGGAGTTTTTGCGATCGCGCGAGGCGACTAGTGCCGC TGCGGCGTGGGGGACCTCGCTCGTGGGCGCCGCGCTGCAGAGCTATGGCGTTGGTGCCTTGATTAATGCCACGGC CACGTTTAGCTACAAGGGAGCTGCCTACCTTGGCGGTCTAATCTTTGCCGCCACTTCGGCCCCGACTGTATGTTG CAATTTTTTTTTTTTTTTTTTGCCTTGTTTGCTTTGCTCGCGTCTTTGCTCTTCCATGTTTCACTTTGCCGGCAA TGGCATTTTTCCTTCCCCCACTGTCTTTTGGGCCTCCCCTTTTTGCTCTGCTTTTCCATGTCTGAGACCATGTGA CTGACTGCTCTTCAGTTCCTGGTGCAAGTTTTCAACGAAAAGAGGCCCCTCGACACGGTCGGAGTGAGCGTCGCC GCAAAGCTCTGCGAGACTATTGGCCTCTCCGTGTTCCTGGTTTGGTGGGGAACTCGCACCAACCCTTTTGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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