© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5252 |
| Gene name | |
| Location | Contig_4:140281..141221 |
| Strand | - |
| Gene length (bp) | 940 |
| Transcript length (bp) | 849 |
| Coding sequence length (bp) | 849 |
| Protein length (aa) | 283 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01145 | Band_7 | SPFH domain / Band 7 family | 1.7E-23 | 33 | 211 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40961|PHB1_YEAST | Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2 | 19 | 265 | 7.0E-131 |
| sp|Q9P7H3|PHB1_SCHPO | Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb1 PE=3 SV=1 | 9 | 279 | 3.0E-126 |
| sp|P24156|L2CC_DROME | Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2 | 10 | 276 | 8.0E-106 |
| sp|O04331|PHB3_ARATH | Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1 | 21 | 281 | 2.0E-105 |
| sp|Q54GI9|PHB1_DICDI | Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1 | 21 | 268 | 1.0E-104 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40961|PHB1_YEAST | Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2 | 19 | 265 | 7.0E-131 |
| sp|Q9P7H3|PHB1_SCHPO | Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb1 PE=3 SV=1 | 9 | 279 | 3.0E-126 |
| sp|P24156|L2CC_DROME | Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2 | 10 | 276 | 8.0E-106 |
| sp|O04331|PHB3_ARATH | Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1 | 21 | 281 | 2.0E-105 |
| sp|Q54GI9|PHB1_DICDI | Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1 | 21 | 268 | 1.0E-104 |
| sp|P84173|PHB_CHICK | Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1 | 7 | 276 | 1.0E-103 |
| sp|P67779|PHB_RAT | Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1 | 7 | 264 | 4.0E-103 |
| sp|P67778|PHB_MOUSE | Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1 | 7 | 264 | 4.0E-103 |
| sp|P35232|PHB_HUMAN | Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1 | 7 | 264 | 1.0E-102 |
| sp|Q3T165|PHB_BOVIN | Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1 | 7 | 264 | 1.0E-102 |
| sp|Q9BKU4|PHB1_CAEEL | Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1 | 1 | 267 | 2.0E-101 |
| sp|Q9LK25|PHB4_ARATH | Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1 SV=1 | 22 | 282 | 6.0E-100 |
| sp|O49460|PHB1_ARATH | Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1 SV=1 | 26 | 262 | 4.0E-95 |
| sp|Q9ZNT7|PHB2_ARATH | Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1 SV=1 | 16 | 262 | 6.0E-94 |
| sp|Q9SIL6|PHB6_ARATH | Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1 SV=1 | 26 | 262 | 1.0E-93 |
| sp|P50085|PHB2_YEAST | Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2 | 27 | 265 | 3.0E-93 |
| sp|Q54Q31|PHB2_DICDI | Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1 | 29 | 265 | 1.0E-92 |
| sp|Q9FFH5|PHB7_ARATH | Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1 SV=1 | 16 | 266 | 1.0E-89 |
| sp|O94550|PHB2_SCHPO | Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb2 PE=1 SV=2 | 29 | 263 | 5.0E-89 |
| sp|A9UMS3|PHB2_XENTR | Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1 | 16 | 263 | 7.0E-87 |
| sp|Q5XIH7|PHB2_RAT | Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1 | 28 | 263 | 8.0E-87 |
| sp|O35129|PHB2_MOUSE | Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1 | 28 | 263 | 8.0E-87 |
| sp|Q99623|PHB2_HUMAN | Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2 | 28 | 263 | 8.0E-87 |
| sp|Q5RB19|PHB2_PONAB | Prohibitin-2 OS=Pongo abelii GN=PHB2 PE=2 SV=1 | 28 | 268 | 2.0E-86 |
| sp|Q2HJ97|PHB2_BOVIN | Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1 | 28 | 263 | 3.0E-86 |
| sp|Q5ZMN3|PHB2_CHICK | Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1 | 28 | 263 | 2.0E-84 |
| sp|Q9LY99|PHB5_ARATH | Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=3 SV=1 | 29 | 280 | 1.0E-78 |
| sp|P50093|PHB2_CAEEL | Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis elegans GN=phb-2 PE=1 SV=2 | 28 | 264 | 5.0E-78 |
| sp|P86220|PHB_MESAU | Prohibitin (Fragments) OS=Mesocricetus auratus GN=PHB PE=1 SV=1 | 87 | 200 | 3.0E-16 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5252 MAQPTQRWMQWVYRAGTPAVTAAMIASQSIFDVRGGSRAVIFDRLNGVRESVIGEGTHFLIPWLQRSIHFDVRIK PRNIATTTGSKDMQMVSLTLRVLHRPIVKELPKIYQNLGVDYAERVLPSIGNEVLKAIVAQFDAAELITQREAVS QRIRNDLTLRAAEFNIALEDVSITHMTFGREFTKAVEQKQIAQQDAERARFIVERAEQERQANVIRAEGEAESAD TIGKAIAKSGNGLIQIRKIEASKEIAQTLSSNPNVTYLPNSKNGSGGSQLLVSVGRG* |
| Coding | >OphauB2|5252 ATGGCCCAGCCAACACAGCGGTGGATGCAGTGGGTGTATCGCGCGGGCACGCCCGCAGTGACGGCGGCCATGATT GCCTCGCAATCAATTTTTGACGTCAGGGGTGGCTCGCGAGCCGTCATTTTTGATCGCTTGAACGGAGTCAGGGAG AGTGTCATTGGCGAGGGCACTCATTTCCTCATTCCCTGGCTTCAGCGAAGCATCCATTTTGATGTGCGCATTAAG CCGCGCAACATTGCTACCACGACTGGCTCCAAAGACATGCAAATGGTTAGCCTGACGTTGCGAGTCCTGCATCGG CCTATTGTTAAAGAGCTACCCAAAATCTACCAAAATCTCGGCGTCGACTATGCAGAGCGTGTTCTCCCCTCCATT GGCAACGAAGTCCTAAAAGCCATTGTTGCCCAATTCGACGCTGCAGAGCTCATCACCCAGCGCGAGGCCGTCTCG CAGCGCATTCGAAACGACCTCACCCTTCGCGCCGCCGAGTTCAACATTGCCCTCGAGGACGTGTCCATTACTCAC ATGACCTTTGGCCGTGAATTCACAAAGGCGGTTGAGCAGAAGCAAATTGCCCAGCAAGATGCCGAGCGCGCCCGC TTCATTGTCGAGCGTGCAGAGCAGGAACGCCAGGCCAATGTTATTCGCGCCGAGGGTGAGGCTGAAAGCGCAGAC ACCATCGGCAAAGCGATTGCAAAGTCGGGCAATGGCTTGATTCAAATTCGCAAGATTGAGGCATCAAAGGAAATT GCCCAGACGCTCTCCTCTAATCCCAATGTTACCTATCTGCCAAACAGCAAGAATGGCTCTGGCGGCAGCCAACTT CTCGTCTCAGTCGGGCGAGGTTGA |
| Transcript | >OphauB2|5252 ATGGCCCAGCCAACACAGCGGTGGATGCAGTGGGTGTATCGCGCGGGCACGCCCGCAGTGACGGCGGCCATGATT GCCTCGCAATCAATTTTTGACGTCAGGGGTGGCTCGCGAGCCGTCATTTTTGATCGCTTGAACGGAGTCAGGGAG AGTGTCATTGGCGAGGGCACTCATTTCCTCATTCCCTGGCTTCAGCGAAGCATCCATTTTGATGTGCGCATTAAG CCGCGCAACATTGCTACCACGACTGGCTCCAAAGACATGCAAATGGTTAGCCTGACGTTGCGAGTCCTGCATCGG CCTATTGTTAAAGAGCTACCCAAAATCTACCAAAATCTCGGCGTCGACTATGCAGAGCGTGTTCTCCCCTCCATT GGCAACGAAGTCCTAAAAGCCATTGTTGCCCAATTCGACGCTGCAGAGCTCATCACCCAGCGCGAGGCCGTCTCG CAGCGCATTCGAAACGACCTCACCCTTCGCGCCGCCGAGTTCAACATTGCCCTCGAGGACGTGTCCATTACTCAC ATGACCTTTGGCCGTGAATTCACAAAGGCGGTTGAGCAGAAGCAAATTGCCCAGCAAGATGCCGAGCGCGCCCGC TTCATTGTCGAGCGTGCAGAGCAGGAACGCCAGGCCAATGTTATTCGCGCCGAGGGTGAGGCTGAAAGCGCAGAC ACCATCGGCAAAGCGATTGCAAAGTCGGGCAATGGCTTGATTCAAATTCGCAAGATTGAGGCATCAAAGGAAATT GCCCAGACGCTCTCCTCTAATCCCAATGTTACCTATCTGCCAAACAGCAAGAATGGCTCTGGCGGCAGCCAACTT CTCGTCTCAGTCGGGCGAGGTTGA |
| Gene | >OphauB2|5252 ATGGCCCAGCCAACACAGCGGTGGATGCAGTGGGTGTATCGCGCGGGCACGCCCGCAGTGACGGCGGCCATGATT GCCTCGCAATCAATTTTTGACGTCAGGGGTGGCTCGCGAGCCGTCATTTTTGATCGCTTGAACGGAGTCAGGGAG AGTGTCATTGGCGAGGGCACTCATTTCCTCATTCCCTGGCTTCAGCGAAGCATCCATTTTGATGTGCGCATTAAG CCGCGCAACATTGCTACCACGACTGGCTCCAAAGACATGCAAATGGTTAGCCTGACGTTGCGAGTCCTGCATCGG CCTATTGTTAAAGAGCTACCCAAAATCTACCAAGTGAGTCTTGCCTACATAATCGCAAGAAGCACATAAACAACA TGTTCAAAACCAACATGCTATGCCTTGACAAGGAGCTGACAAGATGTAGAATCTCGGCGTCGACTATGCAGAGCG TGTTCTCCCCTCCATTGGCAACGAAGTCCTAAAAGCCATTGTTGCCCAATTCGACGCTGCAGAGCTCATCACCCA GCGCGAGGCCGTCTCGCAGCGCATTCGAAACGACCTCACCCTTCGCGCCGCCGAGTTCAACATTGCCCTCGAGGA CGTGTCCATTACTCACATGACCTTTGGCCGTGAATTCACAAAGGCGGTTGAGCAGAAGCAAATTGCCCAGCAAGA TGCCGAGCGCGCCCGCTTCATTGTCGAGCGTGCAGAGCAGGAACGCCAGGCCAATGTTATTCGCGCCGAGGGTGA GGCTGAAAGCGCAGACACCATCGGCAAAGCGATTGCAAAGTCGGGCAATGGCTTGATTCAAATTCGCAAGATTGA GGCATCAAAGGAAATTGCCCAGACGCTCTCCTCTAATCCCAATGTTACCTATCTGCCAAACAGCAAGAATGGCTC TGGCGGCAGCCAACTTCTCGTCTCAGTCGGGCGAGGTTGA |