Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5249
Gene name
LocationContig_4:131757..132763
Strand-
Gene length (bp)1006
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01501 Glyco_transf_8 Glycosyl transferase family 8 2.9E-11 14 277

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9XGN4|GOLS1_AJURE Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1 12 300 2.0E-19
sp|O22693|GOLS4_ARATH Galactinol synthase 4 OS=Arabidopsis thaliana GN=GOLS4 PE=2 SV=1 12 300 5.0E-19
sp|O22893|GOLS1_ARATH Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1 12 294 3.0E-18
sp|C7G304|GOLS2_SOLLC Galactinol synthase 2 OS=Solanum lycopersicum GN=GOLS2 PE=2 SV=1 12 294 1.0E-17
sp|Q8H1S1|GOLS6_ARATH Galactinol synthase 6 OS=Arabidopsis thaliana GN=GOLS6 PE=2 SV=1 12 294 3.0E-17
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9XGN4|GOLS1_AJURE Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1 12 300 2.0E-19
sp|O22693|GOLS4_ARATH Galactinol synthase 4 OS=Arabidopsis thaliana GN=GOLS4 PE=2 SV=1 12 300 5.0E-19
sp|O22893|GOLS1_ARATH Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1 12 294 3.0E-18
sp|C7G304|GOLS2_SOLLC Galactinol synthase 2 OS=Solanum lycopersicum GN=GOLS2 PE=2 SV=1 12 294 1.0E-17
sp|Q8H1S1|GOLS6_ARATH Galactinol synthase 6 OS=Arabidopsis thaliana GN=GOLS6 PE=2 SV=1 12 294 3.0E-17
sp|O80518|GOLS3_ARATH Galactinol synthase 3 OS=Arabidopsis thaliana GN=GOLS3 PE=1 SV=1 12 300 4.0E-17
sp|Q947G8|GOLS1_SOLLC Galactinol synthase 1 OS=Solanum lycopersicum GN=GOLS1 PE=2 SV=1 12 309 1.0E-16
sp|Q4PSY4|GOLS7_ARATH Galactinol synthase 7 OS=Arabidopsis thaliana GN=GOLS7 PE=2 SV=1 12 300 2.0E-16
sp|Q9FXB2|GOLS2_ARATH Galactinol synthase 2 OS=Arabidopsis thaliana GN=GOLS2 PE=1 SV=1 12 300 3.0E-16
sp|Q9FFA1|GOLS5_ARATH Galactinol synthase 5 OS=Arabidopsis thaliana GN=GOLS5 PE=2 SV=1 12 275 5.0E-14
sp|Q5UNW1|YR707_MIMIV Uncharacterized protein R707 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R707 PE=4 SV=1 12 297 2.0E-12
sp|F4KED2|GOLSA_ARATH Galactinol synthase 10 OS=Arabidopsis thaliana GN=GOLS10 PE=3 SV=1 12 294 1.0E-11
sp|Q9XGN3|GOLS2_AJURE Galactinol synthase 2 (Fragment) OS=Ajuga reptans GN=GOLS2 PE=1 SV=1 25 307 1.0E-09
sp|Q8GWW4|GUX2_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS=Arabidopsis thaliana GN=GUX2 PE=2 SV=1 2 121 2.0E-08
[Show less]

GO

GO Term Description Terminal node
GO:0016757 glycosyltransferase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016740 transferase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5249
MSTQPTPDKVWTSLITNLDYLPGLLTLAHSLRRVHSAYPLIALYTDSFPASGLAALAARSIPAHKIPYLLPTKSK
DYSNDPRFYDCWSKLAPFSLTSFSRVVQLDSDMLVLRNMDELMDLPLDDDDGLRADAKLSRRVFAAGHACVCNPL
HKKHYPRDWIPQNCAFTSQHTCPDEAQTVAPDPAVGPLGFMNGGLQVVNPSKFLYDQILAHMEADGANMDFADQS
LLSDLYRGRWVPLPYTYNALKTMRWPGVHDAIWRDDQVKNVHYILSPKPWHELDQDGQWQGTDQTHLWWVNINRE
RKVAEREQGIPDDGF*
Coding >OphauB2|5249
ATGTCCACCCAACCCACCCCAGACAAAGTCTGGACAAGCCTCATCACCAACCTCGACTACCTCCCCGGCCTCCTC
ACCCTCGCCCACTCCCTTCGCCGCGTCCACTCCGCCTACCCCCTCATCGCCCTCTACACCGACTCCTTCCCCGCC
TCTGGTCTCGCCGCCCTTGCTGCGCGCTCCATCCCCGCCCATAAAATCCCCTACCTTTTGCCCACCAAGTCAAAG
GACTACTCCAACGACCCCCGCTTCTACGACTGCTGGTCCAAACTCGCCCCCTTTTCCCTTACCAGTTTCTCCCGT
GTCGTTCAGCTCGATTCGGATATGCTTGTCCTGCGCAACATGGATGAACTCATGGACCTGCCGCTCGATGATGAT
GATGGGCTGCGCGCTGATGCAAAGCTCAGTCGTCGCGTCTTTGCCGCGGGCCATGCTTGCGTGTGCAATCCGCTC
CATAAAAAACACTACCCGCGCGATTGGATTCCCCAAAACTGTGCCTTTACTTCCCAGCATACATGCCCAGACGAG
GCCCAGACTGTCGCTCCAGATCCCGCCGTCGGGCCGCTTGGCTTCATGAATGGCGGCCTCCAAGTCGTTAATCCG
TCAAAATTTCTCTATGACCAGATTCTCGCCCACATGGAGGCCGACGGCGCAAACATGGACTTTGCCGACCAGTCT
CTGCTCTCAGATCTCTATCGCGGCCGCTGGGTTCCTTTGCCCTATACTTATAATGCTCTCAAGACGATGCGCTGG
CCGGGTGTCCATGACGCCATTTGGCGCGATGACCAGGTTAAAAATGTACACTACATTCTCAGTCCCAAGCCTTGG
CATGAGCTCGATCAAGATGGCCAGTGGCAAGGCACCGACCAAACACATCTCTGGTGGGTCAATATCAATCGTGAA
CGCAAGGTCGCCGAGAGGGAGCAGGGTATTCCCGACGATGGCTTTTAA
Transcript >OphauB2|5249
ATGTCCACCCAACCCACCCCAGACAAAGTCTGGACAAGCCTCATCACCAACCTCGACTACCTCCCCGGCCTCCTC
ACCCTCGCCCACTCCCTTCGCCGCGTCCACTCCGCCTACCCCCTCATCGCCCTCTACACCGACTCCTTCCCCGCC
TCTGGTCTCGCCGCCCTTGCTGCGCGCTCCATCCCCGCCCATAAAATCCCCTACCTTTTGCCCACCAAGTCAAAG
GACTACTCCAACGACCCCCGCTTCTACGACTGCTGGTCCAAACTCGCCCCCTTTTCCCTTACCAGTTTCTCCCGT
GTCGTTCAGCTCGATTCGGATATGCTTGTCCTGCGCAACATGGATGAACTCATGGACCTGCCGCTCGATGATGAT
GATGGGCTGCGCGCTGATGCAAAGCTCAGTCGTCGCGTCTTTGCCGCGGGCCATGCTTGCGTGTGCAATCCGCTC
CATAAAAAACACTACCCGCGCGATTGGATTCCCCAAAACTGTGCCTTTACTTCCCAGCATACATGCCCAGACGAG
GCCCAGACTGTCGCTCCAGATCCCGCCGTCGGGCCGCTTGGCTTCATGAATGGCGGCCTCCAAGTCGTTAATCCG
TCAAAATTTCTCTATGACCAGATTCTCGCCCACATGGAGGCCGACGGCGCAAACATGGACTTTGCCGACCAGTCT
CTGCTCTCAGATCTCTATCGCGGCCGCTGGGTTCCTTTGCCCTATACTTATAATGCTCTCAAGACGATGCGCTGG
CCGGGTGTCCATGACGCCATTTGGCGCGATGACCAGGTTAAAAATGTACACTACATTCTCAGTCCCAAGCCTTGG
CATGAGCTCGATCAAGATGGCCAGTGGCAAGGCACCGACCAAACACATCTCTGGTGGGTCAATATCAATCGTGAA
CGCAAGGTCGCCGAGAGGGAGCAGGGTATTCCCGACGATGGCTTTTAA
Gene >OphauB2|5249
ATGTCCACCCAACCCACCCCAGACAAAGGTAACTCCCCCCACCCTCAAACCTCACTCACCACTCTGCTAACCCTC
CCCCTTTTCAGTCTGGACAAGCCTCATCACCAACCTCGACTACCTCCCCGGCCTCCTCACCCTCGCCCACTCCCT
TCGCCGCGTCCACTCCGCCTACCCCCTCATCGCCCTCTACACCGACTCCTTCCCCGCCTCTGGTCTCGCCGCCCT
TGCTGCGCGCTCCATCCCCGCCCATAAAATCCCCTACCTTTTGCCCACCAAGTCAAAGGACTACTCCAACGACCC
CCGCTTCTACGACTGCTGGTCCAAACTCGCCCCCTTTTCCCTTACCAGTTTCTCCCGTGTCGTTCAGCTCGATTC
GGATATGCTTGTCCTGCGCAACATGGATGAACTCATGGACCTGCCGCTCGATGATGATGATGGGCTGCGCGCTGA
TGCAAAGCTCAGTCGTCGCGTCTTTGCCGCGGGCCATGCTTGCGTGTGCAATCCGCTCCATAAAAAACACTACCC
GCGCGATTGGATTCCCCAAAACTGTGCCTTTACTTCCCAGCATACATGCCCAGACGAGGCCCAGACTGTCGCTCC
AGATCCCGCCGTCGGGCCGCTTGGCTTCATGAATGGCGGCCTCCAAGTCGTTAATCCGTCAAAATTTCTCTATGA
CCAGATTCTCGCCCACATGGAGGCCGACGGCGCAAACATGGACTTTGCCGACCAGTCTCTGCTCTCAGATCTCTA
TCGCGGCCGCTGGGTTCCTTTGCCCTATACTTATAATGCTCTCAAGACGATGCGCTGGCCGGGTGTCCATGACGC
CATTTGGCGCGATGACCAGGTTAAAAATGTACACTACATTCTCAGTCCCAAGCCTTGGCATGAGCTCGATCAAGA
TGGCCAGTGGCAAGGCACCGACCAAACACATCTCTGGTGGGTCAATATCAATCGTGAACGCAAGGTCGCCGAGAG
GGAGCAGGGTATTCCCGACGATGGCTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail