© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5246 |
| Gene name | |
| Location | Contig_4:121129..123116 |
| Strand | - |
| Gene length (bp) | 1987 |
| Transcript length (bp) | 1653 |
| Coding sequence length (bp) | 1653 |
| Protein length (aa) | 551 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 6.9E-49 | 70 | 535 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 9.1E-16 | 65 | 129 |
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 5.0E-06 | 49 | 105 |
| PF00070 | Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase | 2.5E-05 | 62 | 96 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8H191|PAO4_ARATH | Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1 | 58 | 531 | 1.0E-29 |
| sp|Q9CAE3|FLD_ARATH | Protein FLOWERING LOCUS D OS=Arabidopsis thaliana GN=FLD PE=1 SV=1 | 63 | 548 | 5.0E-23 |
| sp|Q9LYT1|PAO3_ARATH | Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1 | 61 | 541 | 2.0E-20 |
| sp|Q21988|AMX1_CAEEL | Amine oxidase family member 1 OS=Caenorhabditis elegans GN=amx-1 PE=3 SV=3 | 59 | 529 | 4.0E-20 |
| sp|O96570|A37C_DROLE | Protein anon-37Cs OS=Drosophila lebanonensis GN=anon-37Cs PE=3 SV=1 | 62 | 406 | 1.0E-19 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8H191|PAO4_ARATH | Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1 | 58 | 531 | 1.0E-29 |
| sp|Q9CAE3|FLD_ARATH | Protein FLOWERING LOCUS D OS=Arabidopsis thaliana GN=FLD PE=1 SV=1 | 63 | 548 | 5.0E-23 |
| sp|Q9LYT1|PAO3_ARATH | Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1 | 61 | 541 | 2.0E-20 |
| sp|Q21988|AMX1_CAEEL | Amine oxidase family member 1 OS=Caenorhabditis elegans GN=amx-1 PE=3 SV=3 | 59 | 529 | 4.0E-20 |
| sp|O96570|A37C_DROLE | Protein anon-37Cs OS=Drosophila lebanonensis GN=anon-37Cs PE=3 SV=1 | 62 | 406 | 1.0E-19 |
| sp|Q8C0L6|PAOX_MOUSE | Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Mus musculus GN=Paox PE=1 SV=3 | 61 | 360 | 2.0E-18 |
| sp|Q8VXV7|LDL1_ARATH | Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis thaliana GN=LDL1 PE=1 SV=1 | 33 | 550 | 2.0E-18 |
| sp|Q9SKX5|PAO2_ARATH | Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1 | 84 | 543 | 5.0E-17 |
| sp|O96566|A37C_DROSI | Protein anon-37Cs (Fragment) OS=Drosophila simulans GN=anon-37Cs PE=3 SV=1 | 27 | 406 | 1.0E-16 |
| sp|P50264|FMS1_YEAST | Polyamine oxidase FMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMS1 PE=1 SV=1 | 60 | 538 | 2.0E-16 |
| sp|P18487|A37C_DROME | Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2 SV=3 | 28 | 406 | 3.0E-16 |
| sp|Q4JHE3|OXLA_OXYSC | L-amino-acid oxidase OS=Oxyuranus scutellatus scutellatus PE=2 SV=1 | 62 | 360 | 8.0E-15 |
| sp|Q8CIG3|KDM1B_MOUSE | Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1b PE=1 SV=1 | 83 | 364 | 1.0E-14 |
| sp|A8QL51|OXLA_BUNMU | L-amino-acid oxidase OS=Bungarus multicinctus PE=2 SV=1 | 62 | 360 | 1.0E-14 |
| sp|A8QL52|OXLA_BUNFA | L-amino-acid oxidase OS=Bungarus fasciatus PE=1 SV=1 | 62 | 360 | 1.0E-14 |
| sp|Q6YYZ1|LDL2_ORYSJ | Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1 | 79 | 529 | 5.0E-14 |
| sp|Q6QHF9|PAOX_HUMAN | Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens GN=PAOX PE=1 SV=3 | 86 | 513 | 3.0E-13 |
| sp|Q8NB78|KDM1B_HUMAN | Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3 | 83 | 364 | 5.0E-13 |
| sp|Q9LID0|LDL2_ARATH | Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1 | 63 | 529 | 5.0E-13 |
| sp|Q96RQ9|OXLA_HUMAN | L-amino-acid oxidase OS=Homo sapiens GN=IL4I1 PE=1 SV=1 | 63 | 363 | 6.0E-13 |
| sp|P56742|OXLA_CROAT | L-amino-acid oxidase OS=Crotalus atrox PE=1 SV=2 | 63 | 360 | 6.0E-12 |
| sp|F8S0Z5|OXLA2_CROAD | L-amino-acid oxidase OS=Crotalus adamanteus PE=1 SV=1 | 63 | 360 | 6.0E-12 |
| sp|Q7XUR2|LDL3_ORYSJ | Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica GN=Os04g0560300 PE=2 SV=2 | 33 | 529 | 4.0E-11 |
| sp|Q99K82|SMOX_MOUSE | Spermine oxidase OS=Mus musculus GN=Smox PE=1 SV=1 | 53 | 364 | 6.0E-11 |
| sp|Q865R1|PAOX_BOVIN | Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus GN=PAOX PE=1 SV=3 | 61 | 423 | 9.0E-11 |
| sp|Q01H90|LDL3_ORYSI | Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. indica GN=B0103C08-B0602B01.13 PE=3 SV=1 | 33 | 529 | 1.0E-10 |
| sp|Q9NWM0|SMOX_HUMAN | Spermine oxidase OS=Homo sapiens GN=SMOX PE=1 SV=1 | 53 | 402 | 2.0E-10 |
| sp|O64411|PAO_MAIZE | Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1 | 51 | 360 | 5.0E-10 |
| sp|Q9FNA2|PAO1_ARATH | Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1 | 78 | 360 | 3.0E-08 |
| sp|P19643|AOFB_RAT | Amine oxidase [flavin-containing] B OS=Rattus norvegicus GN=Maob PE=1 SV=3 | 56 | 162 | 5.0E-08 |
| sp|Q9SU79|PAO5_ARATH | Probable polyamine oxidase 5 OS=Arabidopsis thaliana GN=PAO5 PE=2 SV=1 | 60 | 149 | 7.0E-08 |
| sp|Q8BW75|AOFB_MOUSE | Amine oxidase [flavin-containing] B OS=Mus musculus GN=Maob PE=1 SV=4 | 63 | 162 | 8.0E-08 |
| sp|O60341|KDM1A_HUMAN | Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A PE=1 SV=2 | 63 | 159 | 1.0E-07 |
| sp|H8ZPX1|PNAO_PSESP | Pseudooxynicotine oxidase OS=Pseudomonas sp. GN=pao PE=1 SV=1 | 55 | 128 | 1.0E-07 |
| sp|Q6ZQ88|KDM1A_MOUSE | Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a PE=1 SV=2 | 63 | 159 | 1.0E-07 |
| sp|Q9VW97|LSDA_DROME | Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1 | 63 | 131 | 2.0E-07 |
| sp|Q6Q2J0|AOFA_PIG | Amine oxidase [flavin-containing] A OS=Sus scrofa GN=MAOA PE=2 SV=1 | 63 | 131 | 3.0E-07 |
| sp|F4JLS1|LDL3_ARATH | Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=LDL3 PE=2 SV=1 | 57 | 119 | 7.0E-07 |
| sp|Q6NSN2|AOF_DANRE | Amine oxidase [flavin-containing] OS=Danio rerio GN=mao PE=1 SV=1 | 63 | 167 | 9.0E-07 |
| sp|Q5RE60|AOFA_PONAB | Amine oxidase [flavin-containing] A OS=Pongo abelii GN=MAOA PE=2 SV=1 | 63 | 131 | 1.0E-06 |
| sp|P21397|AOFA_HUMAN | Amine oxidase [flavin-containing] A OS=Homo sapiens GN=MAOA PE=1 SV=1 | 63 | 131 | 1.0E-06 |
| sp|Q5NU32|AOFA_HORSE | Amine oxidase [flavin-containing] A OS=Equus caballus GN=MAOA PE=2 SV=1 | 63 | 131 | 2.0E-06 |
| sp|P58027|AOFA_CANLF | Amine oxidase [flavin-containing] A OS=Canis lupus familiaris GN=MAOA PE=2 SV=1 | 63 | 131 | 2.0E-06 |
| sp|P21398|AOFA_BOVIN | Amine oxidase [flavin-containing] A OS=Bos taurus GN=MAOA PE=2 SV=2 | 63 | 131 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5246 MDAYSISYTSLSRRNSSKIYQDLRSVRLASVPLLDSDHIMSKFAAIDAFAEHRDLECDVQPHVAVVGAGVAGLRC ADILLRHGFKVSVIEARNRIGGRIHQQRLQNGHLVDLGPNWIHGTSENPITELAKKTKTAVGSWDTRSYVFDESG HLMPVDEGEGYADVMWNIIQDAFRHSNKHCADIHTAESLLDFFQEKVAEQIPKSEPNFEKKRTILQQMCGLWGAF IGSPVSQQSLKYFWLEECIEGENLFCAGTYEKILKLIAKPALSEADVMFNAQVERILFHQGSENNKVSLQIKAPD RGGGLTMSFDEVVITCPLGWLQHNVEAFEPPLPARLATAIRSIGYGCLEKVYISFPKAFWLSEVGENRRVQGFVQ WLAPEYAASSNPKRWNQEVVELASLTPETSHPTLLFYTYGEQSKYITTALAGIKNGAERDRFLFDFFKPYYSRLP HYSEESSDCQPLASLATDWLHDELAGFGSYSNFQVGLEEGDTDITTMRHGLPEQGLWLAGEHTAPFVALGTVTGA YWSGESVGRRLAEKHARLSRAKGAA* |
| Coding | >OphauB2|5246 ATGGACGCTTACTCGATATCCTACACCAGCCTCTCGCGTCGCAACTCGTCCAAGATCTACCAAGACTTGCGATCG GTCCGCTTGGCGAGCGTCCCTCTGCTTGATAGCGACCATATCATGAGCAAATTTGCTGCAATTGACGCTTTTGCC GAGCATCGAGACCTTGAATGCGACGTACAGCCCCATGTTGCAGTCGTTGGCGCGGGCGTAGCCGGCCTGCGCTGC GCCGACATTCTCCTGCGCCACGGCTTCAAGGTCTCTGTGATTGAGGCTCGCAATCGTATTGGTGGCCGTATACAT CAGCAAAGGCTTCAAAATGGCCATCTTGTCGACTTGGGACCCAACTGGATTCACGGCACCAGTGAGAATCCAATC ACCGAGTTGGCCAAGAAGACCAAGACTGCTGTTGGAAGCTGGGATACAAGGTCATACGTATTTGATGAGTCTGGT CATCTAATGCCAGTGGATGAGGGCGAAGGGTATGCCGATGTCATGTGGAACATCATACAAGACGCCTTCAGACAT TCGAACAAGCACTGCGCCGATATTCACACCGCTGAGAGTCTATTAGATTTCTTCCAGGAAAAGGTTGCTGAGCAA ATACCTAAATCTGAGCCCAACTTTGAGAAAAAGAGGACTATCCTACAGCAGATGTGTGGCCTCTGGGGGGCCTTT ATAGGGAGTCCCGTTTCTCAGCAGAGCCTCAAGTACTTTTGGCTCGAAGAATGCATTGAAGGGGAGAACCTATTT TGCGCTGGCACATATGAAAAGATTCTGAAACTCATTGCCAAGCCGGCTCTTTCTGAGGCTGACGTGATGTTTAAC GCTCAGGTTGAGAGAATACTATTTCACCAAGGCTCCGAAAACAACAAAGTCAGCCTTCAGATTAAAGCACCTGAC CGCGGCGGCGGCCTGACCATGTCATTTGACGAAGTTGTTATTACTTGTCCTCTAGGTTGGCTACAGCACAACGTG GAGGCATTTGAGCCTCCTCTTCCTGCAAGACTGGCAACAGCGATACGCTCCATTGGATACGGCTGCCTCGAAAAG GTTTATATTAGCTTTCCAAAAGCCTTTTGGCTCTCGGAAGTAGGGGAGAATCGTCGAGTCCAAGGCTTTGTGCAG TGGCTTGCTCCGGAATATGCAGCTTCCTCGAATCCCAAGCGCTGGAATCAAGAAGTTGTTGAGCTTGCTAGTCTC ACGCCCGAAACGTCTCACCCGACACTTCTCTTTTACACTTATGGAGAACAGTCGAAATACATTACAACTGCGCTG GCTGGCATTAAAAATGGAGCTGAGCGGGACAGATTTCTCTTTGACTTTTTCAAACCCTATTACTCGCGGCTACCA CACTACAGTGAAGAGTCTTCTGACTGTCAGCCTCTGGCATCTCTGGCCACAGATTGGCTCCACGATGAGTTGGCA GGATTTGGCTCCTACAGCAACTTTCAGGTGGGGCTTGAGGAGGGCGATACTGACATTACAACCATGCGGCATGGG CTGCCGGAGCAAGGTCTGTGGCTAGCAGGTGAGCACACAGCGCCGTTTGTTGCTCTTGGCACAGTCACTGGGGCA TACTGGAGCGGAGAGTCGGTGGGCAGAAGGTTGGCCGAGAAGCATGCTCGACTCAGCCGGGCCAAGGGTGCTGCT TAA |
| Transcript | >OphauB2|5246 ATGGACGCTTACTCGATATCCTACACCAGCCTCTCGCGTCGCAACTCGTCCAAGATCTACCAAGACTTGCGATCG GTCCGCTTGGCGAGCGTCCCTCTGCTTGATAGCGACCATATCATGAGCAAATTTGCTGCAATTGACGCTTTTGCC GAGCATCGAGACCTTGAATGCGACGTACAGCCCCATGTTGCAGTCGTTGGCGCGGGCGTAGCCGGCCTGCGCTGC GCCGACATTCTCCTGCGCCACGGCTTCAAGGTCTCTGTGATTGAGGCTCGCAATCGTATTGGTGGCCGTATACAT CAGCAAAGGCTTCAAAATGGCCATCTTGTCGACTTGGGACCCAACTGGATTCACGGCACCAGTGAGAATCCAATC ACCGAGTTGGCCAAGAAGACCAAGACTGCTGTTGGAAGCTGGGATACAAGGTCATACGTATTTGATGAGTCTGGT CATCTAATGCCAGTGGATGAGGGCGAAGGGTATGCCGATGTCATGTGGAACATCATACAAGACGCCTTCAGACAT TCGAACAAGCACTGCGCCGATATTCACACCGCTGAGAGTCTATTAGATTTCTTCCAGGAAAAGGTTGCTGAGCAA ATACCTAAATCTGAGCCCAACTTTGAGAAAAAGAGGACTATCCTACAGCAGATGTGTGGCCTCTGGGGGGCCTTT ATAGGGAGTCCCGTTTCTCAGCAGAGCCTCAAGTACTTTTGGCTCGAAGAATGCATTGAAGGGGAGAACCTATTT TGCGCTGGCACATATGAAAAGATTCTGAAACTCATTGCCAAGCCGGCTCTTTCTGAGGCTGACGTGATGTTTAAC GCTCAGGTTGAGAGAATACTATTTCACCAAGGCTCCGAAAACAACAAAGTCAGCCTTCAGATTAAAGCACCTGAC CGCGGCGGCGGCCTGACCATGTCATTTGACGAAGTTGTTATTACTTGTCCTCTAGGTTGGCTACAGCACAACGTG GAGGCATTTGAGCCTCCTCTTCCTGCAAGACTGGCAACAGCGATACGCTCCATTGGATACGGCTGCCTCGAAAAG GTTTATATTAGCTTTCCAAAAGCCTTTTGGCTCTCGGAAGTAGGGGAGAATCGTCGAGTCCAAGGCTTTGTGCAG TGGCTTGCTCCGGAATATGCAGCTTCCTCGAATCCCAAGCGCTGGAATCAAGAAGTTGTTGAGCTTGCTAGTCTC ACGCCCGAAACGTCTCACCCGACACTTCTCTTTTACACTTATGGAGAACAGTCGAAATACATTACAACTGCGCTG GCTGGCATTAAAAATGGAGCTGAGCGGGACAGATTTCTCTTTGACTTTTTCAAACCCTATTACTCGCGGCTACCA CACTACAGTGAAGAGTCTTCTGACTGTCAGCCTCTGGCATCTCTGGCCACAGATTGGCTCCACGATGAGTTGGCA GGATTTGGCTCCTACAGCAACTTTCAGGTGGGGCTTGAGGAGGGCGATACTGACATTACAACCATGCGGCATGGG CTGCCGGAGCAAGGTCTGTGGCTAGCAGGTGAGCACACAGCGCCGTTTGTTGCTCTTGGCACAGTCACTGGGGCA TACTGGAGCGGAGAGTCGGTGGGCAGAAGGTTGGCCGAGAAGCATGCTCGACTCAGCCGGGCCAAGGGTGCTGCT TAA |
| Gene | >OphauB2|5246 ATGGACGCTTACTCGATATCCTACACCAGCCTCTCGCGTCGCAACTCGTCCAAGATCTACCAAGACTTGCGATCG GTCCGCTTGGCGAGCGTCCCTCTGCTTGATAGCGACCATATCATGAGCAAATTTGCTGCAATTGACGCTTTTGCC GAGGTATTGATAGAAAGCACATGATTGTCGTTACTACTCATTTCATTGACGTTTTTTTTCTTGCCCTGTCCTTAT TTTCCTGTCCAGTTTAGCACACACTATTCATTGCATTGCCAATCATGTCCTATTGCACACGCCTTTATTCGTGCA TGCATCAACGCACCCACGCTCTTTTGTTTAGCGCAGCCACTTTGCTTACAACGTGTGGGCGCCAGCATCGAGACC TTGAATGCGACGTACAGCCCCATGTTGCAGTCGTTGGCGCGGGCGTAGCCGGCCTGCGCTGCGCCGACATTCTCC TGCGCCACGGCTTCAAGGTCTCTGTGATTGAGGCTCGCAATCGTATTGGTGGCCGTATACATCAGCAAAGGCTTC AAAATGGCCATCTTGTCGACTTGGGACCCAACTGGATTCACGGCACCAGTGAGAATCCAATCACCGAGTTGGCCA AGAAGACCAAGACTGCTGTTGGAAGCTGGGATACAAGGTCATACGTATTTGATGAGTCTGGTCATCTAATGCCAG TGGATGAGGGCGAAGGGTATGCCGATGTCATGTGGAACATCATACAAGACGCCTTCAGACATTCGAACAAGCACT GCGCCGATATTCACACCGCTGAGAGTCTATTAGATTTCTTCCAGGAAAAGGTTGCTGAGCAAATACCTAAATCTG AGCCCAACTTTGAGAAAAAGAGGACTATCCTACAGCAGATGTGTGGCCTCTGGGGGGCCTTTATAGGGAGTCCCG TTTCTCAGCAGAGCCTCAAGTACTTTTGGCTCGAAGAATGCATTGAAGGGGGCAAGCACAATTTTAACCCGTCTC CAAGGAGGACTTTTACTAACCTTGACGATTAGAGAACCTATTTTGCGCTGGCACATATGAAAAGATTCTGAAACT CATTGCCAAGCCGGCTCTTTCTGAGGCTGACGTGATGTTTAACGCTCAGGTTGAGAGAATACTATTTCACCAAGG CTCCGAAAACAACAAAGTCAGCCTTCAGATTAAAGCACCTGACCGCGGCGGCGGCCTGACCATGTCATTTGACGA AGTTGTTATTACTTGTCCTCTAGGTTGGCTACAGCACAACGTGGAGGCATTTGAGCCTCCTCTTCCTGCAAGACT GGCAACAGCGATACGCTCCATTGGATACGGCTGCCTCGAAAAGGCAACGTCTTCCCTGGTCTGCTGGATGAGTAA CTGAGATGCAATGCTGACGTTTGTGCCTTTGTAGGTTTATATTAGCTTTCCAAAAGCCTTTTGGCTCTCGGAAGT AGGGGAGAATCGTCGAGTCCAAGGCTTTGTGCAGTGGCTTGCTCCGGAATATGCAGCTTCCTCGAATCCCAAGCG CTGGAATCAAGAAGTTGTTGAGCTTGCTAGTCTCACGCCCGAAACGTCTCACCCGACACTTCTCTTTTACACTTA TGGAGAACAGTCGAAATACATTACAACTGCGCTGGCTGGCATTAAAAATGGAGCTGAGCGGGACAGATTTCTCTT TGACTTTTTCAAACCCTATTACTCGCGGCTACCACACTACAGTGAAGAGTCTTCTGACTGTCAGCCTCTGGCATC TCTGGCCACAGATTGGCTCCACGATGAGTTGGCAGGATTTGGCTCCTACAGCAACTTTCAGGTGGGGCTTGAGGA GGGCGATACTGACATTACAACCATGCGGCATGGGCTGCCGGAGCAAGGTCTGTGGCTAGCAGGTGAGCACACAGC GCCGTTTGTTGCTCTTGGCACAGTCACTGGGGCATACTGGAGCGGAGAGTCGGTGGGCAGAAGGTTGGCCGAGAA GCATGCTCGACTCAGCCGGGCCAAGGGTGCTGCTTAA |