© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5214 |
| Gene name | |
| Location | Contig_4:4595..5987 |
| Strand | + |
| Gene length (bp) | 1392 |
| Transcript length (bp) | 1116 |
| Coding sequence length (bp) | 1116 |
| Protein length (aa) | 372 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11735 | CAP59_mtransfer | Cryptococcal mannosyltransferase 1 | 5.9E-41 | 126 | 284 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6U1Z4|CMT1_CRYNJ | Alpha-1,3-mannosyltransferase CMT1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CMT1 PE=1 SV=1 | 111 | 354 | 9.0E-32 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5214 MRRRQLSFLAVSLAFSVWLAGILYLGTKLSDQLSRPFPPPFHQQAIHEEPKEEPKEEPKEAPPIPVEVNTATPAS QDILSAEDVVLYIDAILNGSQTNLPSLACPTINSTRYAPLEATDSDNAVLRYFFALDLRDSLTLLPCLIGSIIEA IRFLGPRHCALSIVEGISSDGNGQVLSALKSSLDSLGILYFFQSTPIDTRTGDRIGQLSQLRNMALQPLYSNPSL IDENSTVIFLNDVAICPEDILELVLQRKNLGSDMTCAMDWTHVLQDATFYDVWISRAFTALPLLEQGLRFRAADV QAGECFQGEPQLFCKDMWFHGYGKIAVVPSLVSNQDLAGDKIDWQLEPPEKVKCMVGWHNQFWQMWNETLH* |
| Coding | >OphauB2|5214 ATGCGTCGGAGGCAACTGAGTTTTCTGGCCGTGTCTCTAGCCTTCTCTGTATGGCTGGCCGGAATCCTCTACCTC GGCACCAAGTTATCTGACCAACTATCTCGCCCTTTTCCCCCTCCATTTCACCAACAAGCGATCCATGAAGAGCCC AAAGAGGAGCCCAAAGAGGAGCCCAAAGAAGCGCCCCCAATACCCGTCGAGGTTAACACAGCGACGCCGGCGTCG CAAGACATCCTATCCGCTGAAGATGTCGTCCTTTACATCGATGCCATCTTGAACGGAAGCCAGACAAATTTACCG AGCCTCGCATGTCCCACCATCAACTCTACTCGATACGCACCTCTAGAAGCCACAGACTCGGATAATGCCGTCCTT CGATATTTCTTTGCTCTTGATCTTCGCGACAGCCTTACCCTACTGCCTTGTCTAATTGGCAGCATCATCGAGGCT ATCCGCTTCCTCGGCCCACGACATTGCGCTCTGTCTATTGTCGAGGGGATTTCTTCCGATGGTAATGGCCAAGTC TTGTCAGCTCTTAAATCCAGCCTCGACTCCCTTGGCATTTTGTACTTTTTTCAATCTACGCCCATCGATACACGA ACTGGCGATCGTATTGGCCAGCTCTCCCAGCTCCGGAATATGGCTTTGCAGCCGCTCTACAGCAACCCAAGCTTA ATCGACGAGAATTCGACAGTTATTTTCCTCAATGACGTGGCTATTTGCCCCGAAGATATTCTCGAACTCGTTTTG CAACGAAAAAATTTGGGAAGCGACATGACTTGCGCCATGGACTGGACACATGTCCTCCAAGATGCCACCTTTTAC GACGTGTGGATTTCGCGGGCCTTTACGGCACTCCCGCTTCTGGAGCAAGGGCTGAGATTTAGGGCCGCCGACGTG CAGGCTGGTGAATGCTTTCAAGGCGAGCCACAGTTATTCTGCAAGGACATGTGGTTCCACGGCTACGGCAAGATT GCTGTTGTACCGAGTCTTGTCTCCAACCAAGATTTAGCCGGCGATAAAATCGACTGGCAGCTGGAGCCCCCAGAA AAGGTCAAGTGTATGGTGGGCTGGCACAATCAGTTTTGGCAAATGTGGAATGAGACTTTGCACTAG |
| Transcript | >OphauB2|5214 ATGCGTCGGAGGCAACTGAGTTTTCTGGCCGTGTCTCTAGCCTTCTCTGTATGGCTGGCCGGAATCCTCTACCTC GGCACCAAGTTATCTGACCAACTATCTCGCCCTTTTCCCCCTCCATTTCACCAACAAGCGATCCATGAAGAGCCC AAAGAGGAGCCCAAAGAGGAGCCCAAAGAAGCGCCCCCAATACCCGTCGAGGTTAACACAGCGACGCCGGCGTCG CAAGACATCCTATCCGCTGAAGATGTCGTCCTTTACATCGATGCCATCTTGAACGGAAGCCAGACAAATTTACCG AGCCTCGCATGTCCCACCATCAACTCTACTCGATACGCACCTCTAGAAGCCACAGACTCGGATAATGCCGTCCTT CGATATTTCTTTGCTCTTGATCTTCGCGACAGCCTTACCCTACTGCCTTGTCTAATTGGCAGCATCATCGAGGCT ATCCGCTTCCTCGGCCCACGACATTGCGCTCTGTCTATTGTCGAGGGGATTTCTTCCGATGGTAATGGCCAAGTC TTGTCAGCTCTTAAATCCAGCCTCGACTCCCTTGGCATTTTGTACTTTTTTCAATCTACGCCCATCGATACACGA ACTGGCGATCGTATTGGCCAGCTCTCCCAGCTCCGGAATATGGCTTTGCAGCCGCTCTACAGCAACCCAAGCTTA ATCGACGAGAATTCGACAGTTATTTTCCTCAATGACGTGGCTATTTGCCCCGAAGATATTCTCGAACTCGTTTTG CAACGAAAAAATTTGGGAAGCGACATGACTTGCGCCATGGACTGGACACATGTCCTCCAAGATGCCACCTTTTAC GACGTGTGGATTTCGCGGGCCTTTACGGCACTCCCGCTTCTGGAGCAAGGGCTGAGATTTAGGGCCGCCGACGTG CAGGCTGGTGAATGCTTTCAAGGCGAGCCACAGTTATTCTGCAAGGACATGTGGTTCCACGGCTACGGCAAGATT GCTGTTGTACCGAGTCTTGTCTCCAACCAAGATTTAGCCGGCGATAAAATCGACTGGCAGCTGGAGCCCCCAGAA AAGGTCAAGTGTATGGTGGGCTGGCACAATCAGTTTTGGCAAATGTGGAATGAGACTTTGCACTAG |
| Gene | >OphauB2|5214 ATGCGTCGGAGGCAACTGAGTTTTCTGGCCGTGTCTCTAGCCTTCTCTGTATGGCTGGCCGGAATCCTCTACCTC GGCACCAAGTTATCTGACCAACTATCTCGCCCTTTTCCCCCTCCATTTCACCAACAAGCGATCCATGAAGAGCCC AAAGAGGAGCCCAAAGAGGAGCCCAAAGAAGCGCCCCCAATACCCGTCGAGGTTAACACAGCGACGCCGGCGTCG CAAGGTATGCACGAGCCCCCATGACTAGAAAAGATTCCATGGTGCCAACTCTTCAACTCGCACACAGACATCCTA TCCGCTGAAGATGTCGTCCTTTACATCGATGCCATCTTGAACGGAAGCCAGACAAATTTACCGAGCCTCGCATGT CCCACCATCAACTCTACTCGATACGCACCTCTAGAAGCCACAGACTCGGATAATGCCGTCCTTCGATATTTCTTT GCTCTTGATCTTCGCGACAGCCTTACCCTACTGCCTTGTCTAATTGGCAGCATCATCGAGGCTATCCGCTTCCTC GGCCCACGACATTGCGCTCTGTCTATTGTCGAGGGGATTTCTTCCGATGGTAATGGCCAAGTCTTGTCAGCTCTT AAATCCAGCCTCGACTCCCTTGGCATTTTGTACTTTTTTCAATCTACGCCCATCGATACACGAACTGGCGATCGT ATTGGCCAGCTCTCCCAGCTCCGGAATATGGCTTTGCAGCCGCTCTACAGCAACCCAAGCTTAATCGACGAGAAT TCGACAGTTATTTTCCTCAATGACGTGGCTATTTGCCCCGAAGATATTCTCGAACTCGTTTTGCAACGAAAAAAT TTGGGAAGCGACATGACTTGCGCCATGGACTGGACACATGTCCTCCAAGATGCCACCTTTTACGACGTGTGGATT TCGCGGGGTATGAATGGCGACTCCTTCTTCGAAATCCCTCCTGATGGGAGCTGGGACTTGGCTTGGAACCTATTT TGGAACAATGAGGCTACCCGATCACGCTTCCTTTTGAACCGGCCATTTCAGGTTTTTAGTTGCTGGAACGGCGCG ACAGCCTTTACGGCACTCCCGCTTCTGGAGCAAGGGCTGAGATTTAGGGCCGCCGACGTGCAGGCTGGTGAATGC TTTCAAGGCGAGCCACAGTTATTCTGCAAGGACATGTGGTTCCACGGCTACGGCAAGATTGCTGTTGTACCGAGT GTAAACCTCGAATACTCGGTAGAAAAAGGGCAACGGATTAAGGAAGCAAAAGGGTTTGTATCACAGCTTGTCTCC AACCAAGATTTAGCCGGCGATAAAATCGACTGGCAGCTGGAGCCCCCAGAAAAGGTCAAGTGTATGGTGGGCTGG CACAATCAGTTTTGGCAAATGTGGAATGAGACTTTGCACTAG |