Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5198
Gene name
LocationContig_39:133578..134244
Strand-
Gene length (bp)666
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00445 Ribonuclease_T2 Ribonuclease T2 family 9.2E-16 56 174

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 53 214 6.0E-16
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 57 174 9.0E-13
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 76 174 2.0E-12
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 49 174 5.0E-12
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 75 173 3.0E-10
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 53 214 6.0E-16
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 57 174 9.0E-13
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 76 174 2.0E-12
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 49 174 5.0E-12
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 75 173 3.0E-10
sp|P08056|RNRH_RHINI Ribonuclease Rh OS=Rhizopus niveus PE=1 SV=1 77 177 6.0E-10
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 54 174 7.0E-10
sp|Q5AK94|RNY1A_CANAL Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 77 180 1.0E-08
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 55 214 4.0E-08
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GO

GO Term Description Terminal node
GO:0033897 ribonuclease T2 activity Yes
GO:0003723 RNA binding Yes
GO:0004519 endonuclease activity No
GO:0003824 catalytic activity No
GO:0003676 nucleic acid binding No
GO:0004521 endoribonuclease activity No
GO:0097159 organic cyclic compound binding No
GO:0140098 catalytic activity, acting on RNA No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0004518 nuclease activity No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0016787 hydrolase activity No
GO:0016849 phosphorus-oxygen lyase activity No
GO:0004540 ribonuclease activity No
GO:0003674 molecular_function No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0016829 lyase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5198
MASAIRKTREVTELITSTDLSDRLVPWVLEQINVTSYLRDPEQDAWHLEYMDMDLGQTLRVMMQPWAGRDSQSLD
DIWGDAWLKHGTCVSALKPNCYPEYQPGDEVAPYFDRLAMAYSDDYVERLEEAGIVPCDSERYELAEFEEALVGN
TDSKVRVICDGHVVRSVQVFYKVKQRDGQQWPVAIEDSVFALDKPYAFGNPKSEESQCPDKVRYMATSVKN*
Coding >OphauB2|5198
ATGGCCAGCGCCATTCGCAAGACGCGCGAGGTGACCGAGTTGATAACGTCGACCGACTTGTCCGACCGCCTTGTC
CCCTGGGTGCTCGAGCAAATCAATGTGACGTCGTACCTAAGAGACCCCGAGCAGGACGCGTGGCACCTGGAATAT
ATGGACATGGACCTTGGCCAGACTCTCAGGGTCATGATGCAGCCGTGGGCAGGCCGCGACTCGCAGAGCTTGGAT
GATATTTGGGGTGACGCGTGGCTCAAGCACGGCACCTGCGTCTCTGCGCTCAAGCCCAACTGCTACCCCGAGTAC
CAGCCGGGCGACGAGGTGGCGCCTTATTTCGACCGACTGGCCATGGCTTATAGCGACGACTACGTCGAGAGGCTC
GAGGAAGCCGGCATCGTGCCTTGTGACTCTGAAAGGTACGAGCTGGCCGAGTTTGAAGAGGCGCTTGTGGGCAAT
ACCGATTCCAAGGTCAGGGTCATTTGCGACGGCCATGTGGTGCGCTCGGTCCAAGTCTTTTACAAGGTCAAGCAG
AGGGACGGGCAGCAGTGGCCCGTGGCTATTGAGGACAGCGTCTTTGCTCTCGATAAACCCTACGCCTTTGGCAAC
CCCAAGAGCGAGGAGAGTCAGTGTCCGGACAAGGTTCGCTACATGGCCACGTCGGTCAAGAATTAG
Transcript >OphauB2|5198
ATGGCCAGCGCCATTCGCAAGACGCGCGAGGTGACCGAGTTGATAACGTCGACCGACTTGTCCGACCGCCTTGTC
CCCTGGGTGCTCGAGCAAATCAATGTGACGTCGTACCTAAGAGACCCCGAGCAGGACGCGTGGCACCTGGAATAT
ATGGACATGGACCTTGGCCAGACTCTCAGGGTCATGATGCAGCCGTGGGCAGGCCGCGACTCGCAGAGCTTGGAT
GATATTTGGGGTGACGCGTGGCTCAAGCACGGCACCTGCGTCTCTGCGCTCAAGCCCAACTGCTACCCCGAGTAC
CAGCCGGGCGACGAGGTGGCGCCTTATTTCGACCGACTGGCCATGGCTTATAGCGACGACTACGTCGAGAGGCTC
GAGGAAGCCGGCATCGTGCCTTGTGACTCTGAAAGGTACGAGCTGGCCGAGTTTGAAGAGGCGCTTGTGGGCAAT
ACCGATTCCAAGGTCAGGGTCATTTGCGACGGCCATGTGGTGCGCTCGGTCCAAGTCTTTTACAAGGTCAAGCAG
AGGGACGGGCAGCAGTGGCCCGTGGCTATTGAGGACAGCGTCTTTGCTCTCGATAAACCCTACGCCTTTGGCAAC
CCCAAGAGCGAGGAGAGTCAGTGTCCGGACAAGGTTCGCTACATGGCCACGTCGGTCAAGAATTAG
Gene >OphauB2|5198
ATGGCCAGCGCCATTCGCAAGACGCGCGAGGTGACCGAGTTGATAACGTCGACCGACTTGTCCGACCGCCTTGTC
CCCTGGGTGCTCGAGCAAATCAATGTGACGTCGTACCTAAGAGACCCCGAGCAGGACGCGTGGCACCTGGAATAT
ATGGACATGGACCTTGGCCAGACTCTCAGGGTCATGATGCAGCCGTGGGCAGGCCGCGACTCGCAGAGCTTGGAT
GATATTTGGGGTGACGCGTGGCTCAAGCACGGCACCTGCGTCTCTGCGCTCAAGCCCAACTGCTACCCCGAGTAC
CAGCCGGGCGACGAGGTGGCGCCTTATTTCGACCGACTGGCCATGGCTTATAGCGACGACTACGTCGAGAGGCTC
GAGGAAGCCGGCATCGTGCCTTGTGACTCTGAAAGGTACGAGCTGGCCGAGTTTGAAGAGGCGCTTGTGGGCAAT
ACCGATTCCAAGGTCAGGGTCATTTGCGACGGCCATGTGGTGCGCTCGGTCCAAGTCTTTTACAAGGTCAAGCAG
AGGGACGGGCAGCAGTGGCCCGTGGCTATTGAGGACAGCGTCTTTGCTCTCGATAAACCCTACGCCTTTGGCAAC
CCCAAGAGCGAGGAGAGTCAGTGTCCGGACAAGGTTCGCTACATGGCCACGTCGGTCAAGAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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