© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5195 |
| Gene name | |
| Location | Contig_39:126533..127556 |
| Strand | + |
| Gene length (bp) | 1023 |
| Transcript length (bp) | 1023 |
| Coding sequence length (bp) | 1023 |
| Protein length (aa) | 341 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 8.3E-18 | 41 | 322 |
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 3.4E-14 | 40 | 145 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 1.6E-09 | 36 | 283 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P80299|HYES_RAT | Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 | 40 | 339 | 6.0E-47 |
| sp|P34914|HYES_MOUSE | Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | 40 | 339 | 4.0E-45 |
| sp|P34913|HYES_HUMAN | Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | 40 | 328 | 2.0E-42 |
| sp|Q6Q2C2|HYES_PIG | Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | 40 | 328 | 5.0E-41 |
| sp|Q0IIS3|EPHX3_XENTR | Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 | 22 | 330 | 5.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P80299|HYES_RAT | Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 | 40 | 339 | 6.0E-47 |
| sp|P34914|HYES_MOUSE | Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | 40 | 339 | 4.0E-45 |
| sp|P34913|HYES_HUMAN | Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | 40 | 328 | 2.0E-42 |
| sp|Q6Q2C2|HYES_PIG | Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | 40 | 328 | 5.0E-41 |
| sp|Q0IIS3|EPHX3_XENTR | Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 | 22 | 330 | 5.0E-21 |
| sp|Q6IE26|EPHX4_MOUSE | Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | 22 | 330 | 2.0E-15 |
| sp|O31581|YFHM_BACSU | AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) GN=yfhM PE=3 SV=1 | 41 | 328 | 3.0E-15 |
| sp|Q8IUS5|EPHX4_HUMAN | Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 | 22 | 330 | 4.0E-15 |
| sp|G5EBI4|CEEH1_CAEEL | Epoxide hydrolase 1 OS=Caenorhabditis elegans GN=ceeh-1 PE=1 SV=1 | 41 | 330 | 4.0E-14 |
| sp|G5EDL5|CEEH2_CAEEL | Epoxide hydrolase 2 OS=Caenorhabditis elegans GN=ceeh-2 PE=1 SV=1 | 33 | 195 | 2.0E-12 |
| sp|Q9H6B9|EPHX3_HUMAN | Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1 | 17 | 333 | 1.0E-11 |
| sp|Q3V1F8|EPHX3_MOUSE | Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2 | 12 | 135 | 6.0E-11 |
| sp|O52866|HYES_CORS2 | Soluble epoxide hydrolase OS=Corynebacterium sp. (strain C12) PE=1 SV=3 | 41 | 140 | 2.0E-09 |
| sp|Q1QBB9|DHMA_PSYCK | Haloalkane dehalogenase OS=Psychrobacter cryohalolentis (strain K5) GN=dhmA PE=3 SV=1 | 23 | 127 | 9.0E-08 |
| sp|P9WMS3|DHMA1_MYCTU | Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=dhmA1 PE=1 SV=1 | 27 | 165 | 2.0E-07 |
| sp|P9WMS2|DHMA1_MYCTO | Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=dhmA1 PE=3 SV=1 | 27 | 165 | 2.0E-07 |
| sp|P64302|DHMA1_MYCBO | Haloalkane dehalogenase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=dhmA1 PE=3 SV=1 | 27 | 165 | 2.0E-07 |
| sp|Q1JU72|DEHA_BURSP | Fluoroacetate dehalogenase OS=Burkholderia sp. GN=fac-dex PE=1 SV=1 | 40 | 128 | 1.0E-06 |
| sp|B0SY51|DHMA_CAUSK | Haloalkane dehalogenase OS=Caulobacter sp. (strain K31) GN=dhmA PE=3 SV=1 | 23 | 126 | 2.0E-06 |
| sp|B2HJU9|DHMA_MYCMM | Haloalkane dehalogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=dhmA PE=3 SV=1 | 13 | 127 | 2.0E-06 |
| sp|Q73Y99|DHMA_MYCPA | Haloalkane dehalogenase OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=dhmA PE=3 SV=1 | 20 | 130 | 2.0E-06 |
| sp|Q93K00|DHMA_MYCAV | Haloalkane dehalogenase OS=Mycobacterium avium GN=dhmA PE=1 SV=1 | 20 | 130 | 2.0E-06 |
| Orthofinder run ID | 4 |
| Orthogroup | 680 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5195 MDMSKLKPNDARVQRASFTTRGLTYQYMIGEPQGKSPVGTVLLLHGFPETSFGWRYQVPFLMARGLRVIAPDLLG YAGSSAPTNLEDMSLKKMSEDMKNLVHHVAGHGQQIILGGHDWGGHFAWRMALWQRQLIKCVFTVCLPFFAPSPY SLEDSIRSGKLPNFGYQLQFIGPDVEREIQGETKMRQFINAIFFGRGPEGEYGMSVDKGVIFENLEKLEKTPFQT EEELDHHVAQFMLQKAPQMRGPLNWYRMGAINRNDEKDLGEKDIIFQMPTLFIAATRDAALPPYLSRGMESYMPK LTRGEVDSTHWALIETADEVNDMIGKWLSKIMDDTSKASL* |
| Coding | >OphauB2|5195 ATGGATATGAGTAAACTCAAACCCAATGATGCTCGAGTTCAAAGGGCCAGTTTCACGACCCGCGGCCTGACCTAT CAGTACATGATTGGAGAGCCACAGGGAAAATCACCAGTCGGAACCGTTTTACTGTTGCACGGCTTTCCCGAGACT AGCTTCGGGTGGCGATACCAGGTGCCTTTTTTAATGGCCCGTGGTTTGCGCGTTATTGCTCCGGACTTGCTTGGC TACGCCGGTTCCAGCGCTCCCACAAATCTCGAGGACATGTCGCTCAAGAAAATGTCCGAGGACATGAAGAATCTC GTCCATCATGTTGCTGGTCATGGCCAACAAATTATCCTCGGCGGCCACGACTGGGGTGGCCATTTTGCGTGGAGA ATGGCCTTGTGGCAGCGCCAGCTCATAAAATGTGTCTTTACCGTTTGCCTCCCATTTTTTGCCCCTAGTCCCTAC AGTCTCGAGGATTCCATAAGGAGTGGCAAGCTACCCAACTTTGGGTACCAACTCCAGTTCATAGGCCCAGACGTT GAGCGCGAAATCCAAGGCGAAACCAAAATGCGCCAGTTCATCAACGCCATTTTTTTCGGTCGGGGTCCCGAGGGT GAGTATGGAATGTCAGTGGACAAAGGCGTCATATTCGAAAACCTTGAAAAGCTGGAAAAAACGCCATTCCAGACG GAAGAAGAGCTAGACCATCATGTTGCACAATTCATGCTTCAAAAGGCGCCGCAAATGCGCGGGCCACTCAACTGG TACCGAATGGGTGCCATCAACCGAAACGATGAAAAGGATCTTGGTGAAAAGGACATTATTTTCCAAATGCCAACC CTATTCATTGCCGCAACAAGGGACGCTGCCCTGCCGCCATATTTGTCGCGAGGCATGGAGTCGTACATGCCGAAG CTGACTCGAGGCGAAGTTGATAGCACGCATTGGGCTTTGATCGAGACAGCAGATGAGGTCAACGACATGATTGGC AAGTGGCTGAGCAAGATTATGGATGACACGTCGAAAGCGTCCTTGTAG |
| Transcript | >OphauB2|5195 ATGGATATGAGTAAACTCAAACCCAATGATGCTCGAGTTCAAAGGGCCAGTTTCACGACCCGCGGCCTGACCTAT CAGTACATGATTGGAGAGCCACAGGGAAAATCACCAGTCGGAACCGTTTTACTGTTGCACGGCTTTCCCGAGACT AGCTTCGGGTGGCGATACCAGGTGCCTTTTTTAATGGCCCGTGGTTTGCGCGTTATTGCTCCGGACTTGCTTGGC TACGCCGGTTCCAGCGCTCCCACAAATCTCGAGGACATGTCGCTCAAGAAAATGTCCGAGGACATGAAGAATCTC GTCCATCATGTTGCTGGTCATGGCCAACAAATTATCCTCGGCGGCCACGACTGGGGTGGCCATTTTGCGTGGAGA ATGGCCTTGTGGCAGCGCCAGCTCATAAAATGTGTCTTTACCGTTTGCCTCCCATTTTTTGCCCCTAGTCCCTAC AGTCTCGAGGATTCCATAAGGAGTGGCAAGCTACCCAACTTTGGGTACCAACTCCAGTTCATAGGCCCAGACGTT GAGCGCGAAATCCAAGGCGAAACCAAAATGCGCCAGTTCATCAACGCCATTTTTTTCGGTCGGGGTCCCGAGGGT GAGTATGGAATGTCAGTGGACAAAGGCGTCATATTCGAAAACCTTGAAAAGCTGGAAAAAACGCCATTCCAGACG GAAGAAGAGCTAGACCATCATGTTGCACAATTCATGCTTCAAAAGGCGCCGCAAATGCGCGGGCCACTCAACTGG TACCGAATGGGTGCCATCAACCGAAACGATGAAAAGGATCTTGGTGAAAAGGACATTATTTTCCAAATGCCAACC CTATTCATTGCCGCAACAAGGGACGCTGCCCTGCCGCCATATTTGTCGCGAGGCATGGAGTCGTACATGCCGAAG CTGACTCGAGGCGAAGTTGATAGCACGCATTGGGCTTTGATCGAGACAGCAGATGAGGTCAACGACATGATTGGC AAGTGGCTGAGCAAGATTATGGATGACACGTCGAAAGCGTCCTTGTAG |
| Gene | >OphauB2|5195 ATGGATATGAGTAAACTCAAACCCAATGATGCTCGAGTTCAAAGGGCCAGTTTCACGACCCGCGGCCTGACCTAT CAGTACATGATTGGAGAGCCACAGGGAAAATCACCAGTCGGAACCGTTTTACTGTTGCACGGCTTTCCCGAGACT AGCTTCGGGTGGCGATACCAGGTGCCTTTTTTAATGGCCCGTGGTTTGCGCGTTATTGCTCCGGACTTGCTTGGC TACGCCGGTTCCAGCGCTCCCACAAATCTCGAGGACATGTCGCTCAAGAAAATGTCCGAGGACATGAAGAATCTC GTCCATCATGTTGCTGGTCATGGCCAACAAATTATCCTCGGCGGCCACGACTGGGGTGGCCATTTTGCGTGGAGA ATGGCCTTGTGGCAGCGCCAGCTCATAAAATGTGTCTTTACCGTTTGCCTCCCATTTTTTGCCCCTAGTCCCTAC AGTCTCGAGGATTCCATAAGGAGTGGCAAGCTACCCAACTTTGGGTACCAACTCCAGTTCATAGGCCCAGACGTT GAGCGCGAAATCCAAGGCGAAACCAAAATGCGCCAGTTCATCAACGCCATTTTTTTCGGTCGGGGTCCCGAGGGT GAGTATGGAATGTCAGTGGACAAAGGCGTCATATTCGAAAACCTTGAAAAGCTGGAAAAAACGCCATTCCAGACG GAAGAAGAGCTAGACCATCATGTTGCACAATTCATGCTTCAAAAGGCGCCGCAAATGCGCGGGCCACTCAACTGG TACCGAATGGGTGCCATCAACCGAAACGATGAAAAGGATCTTGGTGAAAAGGACATTATTTTCCAAATGCCAACC CTATTCATTGCCGCAACAAGGGACGCTGCCCTGCCGCCATATTTGTCGCGAGGCATGGAGTCGTACATGCCGAAG CTGACTCGAGGCGAAGTTGATAGCACGCATTGGGCTTTGATCGAGACAGCAGATGAGGTCAACGACATGATTGGC AAGTGGCTGAGCAAGATTATGGATGACACGTCGAAAGCGTCCTTGTAG |