Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5146
Gene name
LocationContig_384:2507..3770
Strand-
Gene length (bp)1263
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18261 Rpn9_C Rpn9 C-terminal helix 5.5E-16 341 373
PF01399 PCI PCI domain 7.7E-09 234 333

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US13|RPN9_SCHPO Probable 26S proteasome regulatory subunit rpn9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn9 PE=3 SV=1 1 378 3.0E-105
sp|Q04062|RPN9_YEAST 26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN9 PE=1 SV=1 3 378 3.0E-82
sp|Q9UNM6|PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=2 3 376 3.0E-74
sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1 3 376 1.0E-73
sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1 3 376 1.0E-73
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US13|RPN9_SCHPO Probable 26S proteasome regulatory subunit rpn9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn9 PE=3 SV=1 1 378 3.0E-105
sp|Q04062|RPN9_YEAST 26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN9 PE=1 SV=1 3 378 3.0E-82
sp|Q9UNM6|PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=2 3 376 3.0E-74
sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1 3 376 1.0E-73
sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1 3 376 1.0E-73
sp|Q5E964|PSD13_BOVIN 26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1 3 376 3.0E-73
sp|Q9WVJ2|PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1 3 376 3.0E-72
sp|Q54NQ0|PSD13_DICDI 26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1 24 358 4.0E-64
sp|Q8GYA6|PS13B_ARATH 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana GN=RPN9B PE=1 SV=1 1 379 5.0E-61
sp|Q8RWF0|PS13A_ARATH 26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Arabidopsis thaliana GN=RPN9A PE=1 SV=1 1 379 9.0E-61
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5391
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1306
Ophiocordyceps australis map64 (Brazil) OphauB2|5146 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|01801
Ophiocordyceps camponoti-rufipedis Ophun1|3264
Ophiocordyceps kimflemingae Ophio5|7914
Ophiocordyceps subramaniannii Hirsu2|5536

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5146
MTVEDFLAEQRDKAPDELQPLYLDFENFWERKLWHQLTDALARFFAHPSSASQRLPFYKAFILKFADKINQLKLV
SLALNAATQCKDDHERLAFLQSIAAKVDHQDSQDAFVFALVAVARVKLSLNELDEARKDLDAAEKILDLFDSVET
VVHANFYDASASYYHRKLDFANYYRTALLYLACVDLSSMSIQERRQRAYFLSVAALVSNSIYNFGELLLHPILDA
LAQSDGDAWLRKLLFAYNRGDLAAYNVLSDNISSNALLNEHSSQLQQKIYLAALTEAVFRRPPHDRAMTFATISS
ETKVRPDEIERLIMKALSLGLLRGTIDQVESIAHITWVQPKVLDMQQINAMRRRLLNWDSNVDQLGNWIETAGKD
VWAA*
Coding >OphauB2|5146
ATGACTGTCGAAGATTTCCTTGCTGAACAGCGTGATAAAGCTCCAGACGAGCTTCAACCACTCTATCTCGACTTT
GAGAACTTCTGGGAACGCAAGCTATGGCACCAGCTCACAGACGCCCTTGCTCGCTTCTTTGCCCATCCCTCCAGT
GCATCGCAACGTTTGCCCTTTTATAAGGCCTTTATCCTAAAATTTGCCGACAAGATAAACCAGCTCAAGCTGGTA
TCTCTGGCTCTCAATGCCGCTACGCAATGCAAGGATGACCACGAGCGCCTTGCCTTTCTACAGTCAATCGCCGCC
AAGGTCGATCATCAAGATTCGCAGGATGCCTTCGTCTTCGCTCTAGTGGCCGTCGCACGGGTCAAGCTGAGCTTG
AACGAGCTAGATGAGGCAAGAAAAGACCTTGACGCGGCTGAGAAAATACTGGACTTATTTGACTCAGTCGAGACG
GTTGTTCATGCCAACTTTTATGATGCCAGCGCAAGCTATTATCACCGCAAACTGGACTTTGCCAACTACTACCGC
ACTGCATTGCTCTACCTTGCATGCGTTGACTTGTCGTCCATGTCAATTCAAGAGCGTCGCCAGAGAGCCTATTTT
CTTAGTGTGGCTGCCCTCGTATCAAATAGCATCTATAACTTTGGCGAGCTTCTCTTGCATCCAATTCTTGATGCT
CTGGCCCAGAGCGACGGCGACGCCTGGCTGCGCAAGCTCCTCTTTGCTTATAACCGAGGCGATCTTGCGGCCTAC
AACGTGCTTTCCGATAACATCTCATCCAATGCACTACTCAACGAGCACTCAAGTCAATTACAACAGAAGATCTAC
CTTGCCGCTCTCACGGAAGCTGTCTTTCGCCGCCCACCTCACGATAGGGCCATGACCTTTGCAACCATTTCGTCT
GAGACCAAAGTAAGGCCCGACGAAATTGAACGTCTCATAATGAAAGCTCTCAGCCTTGGTCTCCTGCGCGGCACA
ATCGACCAGGTTGAAAGTATCGCTCACATTACATGGGTTCAGCCCAAGGTGCTTGACATGCAGCAGATCAACGCT
ATGCGCCGACGCCTTCTCAACTGGGACTCCAACGTCGATCAACTCGGCAACTGGATTGAAACGGCTGGAAAGGAT
GTCTGGGCAGCGTAG
Transcript >OphauB2|5146
ATGACTGTCGAAGATTTCCTTGCTGAACAGCGTGATAAAGCTCCAGACGAGCTTCAACCACTCTATCTCGACTTT
GAGAACTTCTGGGAACGCAAGCTATGGCACCAGCTCACAGACGCCCTTGCTCGCTTCTTTGCCCATCCCTCCAGT
GCATCGCAACGTTTGCCCTTTTATAAGGCCTTTATCCTAAAATTTGCCGACAAGATAAACCAGCTCAAGCTGGTA
TCTCTGGCTCTCAATGCCGCTACGCAATGCAAGGATGACCACGAGCGCCTTGCCTTTCTACAGTCAATCGCCGCC
AAGGTCGATCATCAAGATTCGCAGGATGCCTTCGTCTTCGCTCTAGTGGCCGTCGCACGGGTCAAGCTGAGCTTG
AACGAGCTAGATGAGGCAAGAAAAGACCTTGACGCGGCTGAGAAAATACTGGACTTATTTGACTCAGTCGAGACG
GTTGTTCATGCCAACTTTTATGATGCCAGCGCAAGCTATTATCACCGCAAACTGGACTTTGCCAACTACTACCGC
ACTGCATTGCTCTACCTTGCATGCGTTGACTTGTCGTCCATGTCAATTCAAGAGCGTCGCCAGAGAGCCTATTTT
CTTAGTGTGGCTGCCCTCGTATCAAATAGCATCTATAACTTTGGCGAGCTTCTCTTGCATCCAATTCTTGATGCT
CTGGCCCAGAGCGACGGCGACGCCTGGCTGCGCAAGCTCCTCTTTGCTTATAACCGAGGCGATCTTGCGGCCTAC
AACGTGCTTTCCGATAACATCTCATCCAATGCACTACTCAACGAGCACTCAAGTCAATTACAACAGAAGATCTAC
CTTGCCGCTCTCACGGAAGCTGTCTTTCGCCGCCCACCTCACGATAGGGCCATGACCTTTGCAACCATTTCGTCT
GAGACCAAAGTAAGGCCCGACGAAATTGAACGTCTCATAATGAAAGCTCTCAGCCTTGGTCTCCTGCGCGGCACA
ATCGACCAGGTTGAAAGTATCGCTCACATTACATGGGTTCAGCCCAAGGTGCTTGACATGCAGCAGATCAACGCT
ATGCGCCGACGCCTTCTCAACTGGGACTCCAACGTCGATCAACTCGGCAACTGGATTGAAACGGCTGGAAAGGAT
GTCTGGGCAGCGTAG
Gene >OphauB2|5146
ATGACTGTCGAAGATTTCCTTGCTGAACAGCGTGATAAAGCTCCAGACGAGCTTCAACCACTCTATCTCGACTTT
GAGAACTTCTGGGAACGCAAGCTATGGCACCAGCTCACAGACGCCCTTGCTCGCTTCTTTGCCCATCCCTCCAGT
GCATCGCAACGTTTGCCCTTTTATAAGGCCTTTATCCTAAAATTTGCCGACAAGATAAACCAGCTCAAGCTGGTA
TCTCTGGCTCTCAATGCCGCTACGCAATGCAAGGGTATGTTCGTTATTACGCCGATATCCTCTCTCACACTTGTG
GGTAATTTGTTATGCATTTTCCGCAGATGACCACGAGCGCCTTGCCTTTCTACAGTCAATCGCCGCCAAGGTCGA
TCATCAAGATTCGCAGGATGCCTTCGTCTTCGCTCTAGTGGCCGTCGCACGGGTCAAGCTGAGCTTGAACGAGCT
AGATGAGGCAAGAAAAGACCTTGACGCGGCTGAGAAAATACTGGACTTATTTGACTCAGTCGAGACGGTTGTTCA
TGCCAACTTTTATGATGCCAGCGCAAGCTATTATCACGTGCGTACTCTTGAGTCAATGTATGACTTGCCACTGAC
GTCCCTTATGGCCTCAAGCGCAAACTGGACTTTGCCAACTACTACCGCACTGCATTGCTCTACCTTGCATGCGTT
GACTTGTCGTCCATGTCAATTCAAGAGCGTCGCCAGAGAGCCTATTTTCTTAGTGTGGCTGCCCTCGTATCAAAT
AGCATCTATAACTTTGGCGAGCTTCTCTTGCATCCAATTCTTGATGCTCTGGCCCAGAGCGACGGCGACGCCTGG
CTGCGCAAGCTCCTCTTTGCTTATAACCGAGGCGATCTTGCGGCCTACAACGTGCTTTCCGATAACATCTCATCC
AATGCACTACTCAACGAGCACTCAAGTCAATTACAACAGAAGATCTACCTTGCCGCTCTCACGGAAGCTGTCTTT
CGCCGCCCACCTCACGATAGGGCCATGACCTTTGCAACCATTTCGTCTGAGACCAAAGTAAGGCCCGACGAAATT
GAACGTCTCATAATGAAAGCTCTCAGCCTTGGTCTCCTGCGCGGCACAATCGACCAGGTTGAAAGTATCGCTCAC
ATTACATGGGTTCAGCCCAAGGTGCTTGACATGCAGCAGATCAACGCTATGCGCCGACGCCTTCTCAACTGGGAC
TCCAACGTCGATCAACTCGGCAACTGGATTGAAACGGCTGGAAAGGATGTCTGGGCAGCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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