© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|5117 |
| Gene name | |
| Location | Contig_38:76472..77609 |
| Strand | + |
| Gene length (bp) | 1137 |
| Transcript length (bp) | 1137 |
| Coding sequence length (bp) | 1137 |
| Protein length (aa) | 379 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02678 | Pirin | Pirin | 3.1E-24 | 112 | 229 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9I4C8|Y1210_PSEAE | Putative quercetin 2,3-dioxygenase PA1210 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1210 PE=3 SV=1 | 101 | 268 | 1.0E-37 |
| sp|P58116|YHHW_ECO57 | Quercetin 2,3-dioxygenase OS=Escherichia coli O157:H7 GN=yhhW PE=3 SV=1 | 110 | 261 | 5.0E-37 |
| sp|P46852|YHHW_ECOLI | Quercetin 2,3-dioxygenase OS=Escherichia coli (strain K12) GN=yhhW PE=1 SV=1 | 110 | 261 | 5.0E-37 |
| sp|P73623|Y1773_SYNY3 | Putative quercetin 2,3-dioxygenase sll1773 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1773 PE=3 SV=1 | 101 | 375 | 5.0E-34 |
| sp|Q9XBR7|Y1337_ZYMMO | Putative quercetin 2,3-dioxygenase ZMO1337 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=ZMO1337 PE=3 SV=1 | 101 | 378 | 3.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9I4C8|Y1210_PSEAE | Putative quercetin 2,3-dioxygenase PA1210 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1210 PE=3 SV=1 | 101 | 268 | 1.0E-37 |
| sp|P58116|YHHW_ECO57 | Quercetin 2,3-dioxygenase OS=Escherichia coli O157:H7 GN=yhhW PE=3 SV=1 | 110 | 261 | 5.0E-37 |
| sp|P46852|YHHW_ECOLI | Quercetin 2,3-dioxygenase OS=Escherichia coli (strain K12) GN=yhhW PE=1 SV=1 | 110 | 261 | 5.0E-37 |
| sp|P73623|Y1773_SYNY3 | Putative quercetin 2,3-dioxygenase sll1773 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1773 PE=3 SV=1 | 101 | 375 | 5.0E-34 |
| sp|Q9XBR7|Y1337_ZYMMO | Putative quercetin 2,3-dioxygenase ZMO1337 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=ZMO1337 PE=3 SV=1 | 101 | 378 | 3.0E-33 |
| sp|P65725|Y187_MYCBO | Putative quercetin 2,3-dioxygenase Mb0187c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0187c PE=3 SV=1 | 100 | 303 | 8.0E-32 |
| sp|P9WI85|Y181_MYCTU | Putative quercetin 2,3-dioxygenase Rv0181c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0181c PE=1 SV=1 | 100 | 303 | 8.0E-32 |
| sp|P9WI84|Y181_MYCTO | Putative quercetin 2,3-dioxygenase MT0190 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0190 PE=3 SV=1 | 100 | 303 | 8.0E-32 |
| sp|Q9CKD7|Y1685_PASMU | Putative quercetin 2,3-dioxygenase PM1685 OS=Pasteurella multocida (strain Pm70) GN=PM1685 PE=3 SV=1 | 117 | 261 | 3.0E-30 |
| sp|P58113|Y1473_CAUCR | Pirin-like protein CC_1473 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=CC_1473 PE=3 SV=1 | 101 | 260 | 6.0E-29 |
| sp|P42624|YHAK_ECOLI | Pirin-like protein YhaK OS=Escherichia coli (strain K12) GN=yhaK PE=1 SV=1 | 111 | 352 | 2.0E-10 |
| sp|P58115|YHAK_ECO57 | Pirin-like protein YhaK OS=Escherichia coli O157:H7 GN=yhaK PE=3 SV=1 | 111 | 352 | 2.0E-10 |
| sp|Q9LPS9|PRNL1_ARATH | Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1 | 133 | 229 | 6.0E-10 |
| sp|Q9ZW82|PRNL2_ARATH | Pirin-like protein At2g43120 OS=Arabidopsis thaliana GN=At2g43120 PE=2 SV=3 | 142 | 229 | 8.0E-10 |
| sp|Q9SEE4|PIRL_SOLLC | Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1 | 132 | 260 | 2.0E-09 |
| sp|Q9KKY1|Y3769_VIBCH | Putative quercetin 2,3-dioxygenase VC_A0969 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_A0969 PE=3 SV=1 | 126 | 229 | 5.0E-09 |
| sp|Q9HZ00|Y3240_PSEAE | Putative quercetin 2,3-dioxygenase PA3240 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA3240 PE=3 SV=1 | 151 | 239 | 3.0E-08 |
| sp|Q9LX45|PRNL4_ARATH | Putative pirin-like protein At3g59260 OS=Arabidopsis thaliana GN=At3g59260 PE=3 SV=1 | 143 | 229 | 7.0E-08 |
| sp|P58112|Y481_CAUCR | Pirin-like protein CC_0481 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=CC_0481 PE=3 SV=1 | 134 | 313 | 8.0E-08 |
| sp|Q9LX49|PRN1_ARATH | Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1 | 152 | 229 | 2.0E-07 |
| sp|Q9D711|PIR_MOUSE | Pirin OS=Mus musculus GN=Pir PE=1 SV=1 | 132 | 230 | 3.0E-07 |
| sp|O00625|PIR_HUMAN | Pirin OS=Homo sapiens GN=PIR PE=1 SV=1 | 132 | 230 | 4.0E-07 |
| sp|Q5M827|PIR_RAT | Pirin OS=Rattus norvegicus GN=Pir PE=1 SV=1 | 132 | 230 | 4.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5117 MAVHIADASKPFDIGESSHGFYSLQPRVYKMPRLFLWSAILIASISVVLIFAPRATDPLILTIRSSLDKNLTRVD TKTRHQSNSMRKAPFNMSKSLLNKAIIKPHPSAARGHSDHGWLNTHHSFSFADWYNPDFTQFGSLRVLNEDRVKA MSGFPTHPHRDFEIFSYILSGELTHRDSVVSKSAGDGEQSDDFYRMHRGDVQFTTGGTGIAHSEMNEHKTDTVHF LQIWAVPWKRGLPPRYHTRHFDDGEKRKGFVTILSPLKGGQEATAQQEEAAEPMTANSIPIHADFAMGAAIIAPQ ARFEWIVGNKSTAATRRKVYVHLPMTNKGKAKIRLDGRQDAELSEGDGAFIQGVNAGDRLGVESIGEGDAEVIVL DTA* |
| Coding | >OphauB2|5117 ATGGCGGTGCATATAGCGGATGCATCCAAGCCTTTTGACATTGGCGAATCTTCGCACGGCTTCTACAGCTTGCAG CCCAGAGTCTATAAAATGCCTCGACTATTTCTTTGGAGTGCCATTTTGATTGCATCCATTTCCGTTGTACTTATA TTTGCTCCCAGGGCCACAGATCCGTTGATATTGACCATTAGGAGCAGCCTCGACAAAAATTTGACCAGAGTAGAC ACCAAGACAAGACATCAATCGAACTCGATGCGCAAAGCGCCTTTCAACATGTCCAAATCTCTGCTCAACAAGGCC ATCATCAAGCCTCATCCATCAGCGGCCCGCGGCCACTCGGACCATGGCTGGCTCAACACCCATCACAGCTTTTCC TTTGCGGACTGGTACAATCCAGACTTTACGCAATTTGGCTCTCTGCGAGTACTCAATGAGGACCGTGTCAAGGCC ATGTCGGGGTTTCCAACGCACCCGCACCGCGACTTTGAGATATTCAGTTATATCCTGTCGGGCGAGCTCACGCAC CGCGACTCGGTGGTTTCCAAGAGCGCTGGAGATGGCGAGCAATCTGATGACTTCTACCGCATGCACCGCGGCGAC GTGCAGTTTACGACGGGGGGCACTGGCATTGCACACTCGGAGATGAATGAGCACAAGACAGACACGGTGCATTTT CTACAAATCTGGGCCGTGCCTTGGAAGCGTGGTCTGCCGCCGCGATACCACACGCGTCATTTTGACGATGGCGAG AAGCGCAAGGGCTTTGTCACCATTCTCAGTCCGCTCAAGGGAGGCCAGGAGGCGACGGCGCAGCAGGAAGAGGCA GCTGAGCCTATGACTGCCAACTCGATTCCCATTCACGCCGACTTTGCCATGGGCGCAGCAATCATTGCGCCACAG GCGCGGTTCGAGTGGATAGTGGGCAACAAGTCGACAGCGGCCACCAGGCGCAAGGTATATGTGCATTTGCCCATG ACGAACAAGGGCAAGGCCAAGATACGGCTCGATGGGCGCCAAGATGCCGAGCTATCAGAAGGAGATGGCGCCTTT ATCCAAGGGGTCAATGCCGGCGATAGGCTGGGGGTGGAGAGCATTGGCGAGGGCGATGCCGAGGTGATTGTCCTG GACACGGCATAG |
| Transcript | >OphauB2|5117 ATGGCGGTGCATATAGCGGATGCATCCAAGCCTTTTGACATTGGCGAATCTTCGCACGGCTTCTACAGCTTGCAG CCCAGAGTCTATAAAATGCCTCGACTATTTCTTTGGAGTGCCATTTTGATTGCATCCATTTCCGTTGTACTTATA TTTGCTCCCAGGGCCACAGATCCGTTGATATTGACCATTAGGAGCAGCCTCGACAAAAATTTGACCAGAGTAGAC ACCAAGACAAGACATCAATCGAACTCGATGCGCAAAGCGCCTTTCAACATGTCCAAATCTCTGCTCAACAAGGCC ATCATCAAGCCTCATCCATCAGCGGCCCGCGGCCACTCGGACCATGGCTGGCTCAACACCCATCACAGCTTTTCC TTTGCGGACTGGTACAATCCAGACTTTACGCAATTTGGCTCTCTGCGAGTACTCAATGAGGACCGTGTCAAGGCC ATGTCGGGGTTTCCAACGCACCCGCACCGCGACTTTGAGATATTCAGTTATATCCTGTCGGGCGAGCTCACGCAC CGCGACTCGGTGGTTTCCAAGAGCGCTGGAGATGGCGAGCAATCTGATGACTTCTACCGCATGCACCGCGGCGAC GTGCAGTTTACGACGGGGGGCACTGGCATTGCACACTCGGAGATGAATGAGCACAAGACAGACACGGTGCATTTT CTACAAATCTGGGCCGTGCCTTGGAAGCGTGGTCTGCCGCCGCGATACCACACGCGTCATTTTGACGATGGCGAG AAGCGCAAGGGCTTTGTCACCATTCTCAGTCCGCTCAAGGGAGGCCAGGAGGCGACGGCGCAGCAGGAAGAGGCA GCTGAGCCTATGACTGCCAACTCGATTCCCATTCACGCCGACTTTGCCATGGGCGCAGCAATCATTGCGCCACAG GCGCGGTTCGAGTGGATAGTGGGCAACAAGTCGACAGCGGCCACCAGGCGCAAGGTATATGTGCATTTGCCCATG ACGAACAAGGGCAAGGCCAAGATACGGCTCGATGGGCGCCAAGATGCCGAGCTATCAGAAGGAGATGGCGCCTTT ATCCAAGGGGTCAATGCCGGCGATAGGCTGGGGGTGGAGAGCATTGGCGAGGGCGATGCCGAGGTGATTGTCCTG GACACGGCATAG |
| Gene | >OphauB2|5117 ATGGCGGTGCATATAGCGGATGCATCCAAGCCTTTTGACATTGGCGAATCTTCGCACGGCTTCTACAGCTTGCAG CCCAGAGTCTATAAAATGCCTCGACTATTTCTTTGGAGTGCCATTTTGATTGCATCCATTTCCGTTGTACTTATA TTTGCTCCCAGGGCCACAGATCCGTTGATATTGACCATTAGGAGCAGCCTCGACAAAAATTTGACCAGAGTAGAC ACCAAGACAAGACATCAATCGAACTCGATGCGCAAAGCGCCTTTCAACATGTCCAAATCTCTGCTCAACAAGGCC ATCATCAAGCCTCATCCATCAGCGGCCCGCGGCCACTCGGACCATGGCTGGCTCAACACCCATCACAGCTTTTCC TTTGCGGACTGGTACAATCCAGACTTTACGCAATTTGGCTCTCTGCGAGTACTCAATGAGGACCGTGTCAAGGCC ATGTCGGGGTTTCCAACGCACCCGCACCGCGACTTTGAGATATTCAGTTATATCCTGTCGGGCGAGCTCACGCAC CGCGACTCGGTGGTTTCCAAGAGCGCTGGAGATGGCGAGCAATCTGATGACTTCTACCGCATGCACCGCGGCGAC GTGCAGTTTACGACGGGGGGCACTGGCATTGCACACTCGGAGATGAATGAGCACAAGACAGACACGGTGCATTTT CTACAAATCTGGGCCGTGCCTTGGAAGCGTGGTCTGCCGCCGCGATACCACACGCGTCATTTTGACGATGGCGAG AAGCGCAAGGGCTTTGTCACCATTCTCAGTCCGCTCAAGGGAGGCCAGGAGGCGACGGCGCAGCAGGAAGAGGCA GCTGAGCCTATGACTGCCAACTCGATTCCCATTCACGCCGACTTTGCCATGGGCGCAGCAATCATTGCGCCACAG GCGCGGTTCGAGTGGATAGTGGGCAACAAGTCGACAGCGGCCACCAGGCGCAAGGTATATGTGCATTTGCCCATG ACGAACAAGGGCAAGGCCAAGATACGGCTCGATGGGCGCCAAGATGCCGAGCTATCAGAAGGAGATGGCGCCTTT ATCCAAGGGGTCAATGCCGGCGATAGGCTGGGGGTGGAGAGCATTGGCGAGGGCGATGCCGAGGTGATTGTCCTG GACACGGCATAG |