© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|511 |
| Gene name | |
| Location | Contig_109:20108..20809 |
| Strand | + |
| Gene length (bp) | 701 |
| Transcript length (bp) | 633 |
| Coding sequence length (bp) | 633 |
| Protein length (aa) | 211 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08229 | SHR3_chaperone | ER membrane protein SH3 | 1.1E-73 | 18 | 209 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02774|SHR3_YEAST | Secretory component protein SHR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHR3 PE=1 SV=2 | 14 | 207 | 1.0E-21 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 103 | 125 | 22 |
| 4 | 163 | 181 | 18 |
| Orthofinder run ID | 4 |
| Orthogroup | 1334 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|511 MAYIDYSKTTRSKNYRGSGSFATFLIIGPTCFFLGILFASFPYDFQLLWTKEPVSDTYYDQLETHLRFMHQSPPL IGRILNIMMSVGYLGFFSKLFRPSEANFLFDGASLILYTIGVAVYLSNIVRGLRAISANLWESPEFLENAEGRFE GEFVLGREDSLKVLAASNTILALVLIGVLILQAGQWYAEKRESDDEAAAEAAEKKDKKKQ* |
| Coding | >OphauB2|511 ATGGCCTACATTGATTACTCCAAGACGACGAGGTCCAAGAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG ATTATTGGACCGACGTGCTTCTTCCTCGGCATTCTCTTCGCCTCCTTCCCCTACGACTTTCAGTTGCTATGGACT AAGGAGCCCGTCAGTGACACATATTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCGCCGCCGCTA ATAGGACGCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTTTCCAAGCTCTTCCGGCCCAGCGAG GCAAACTTTTTGTTTGACGGCGCATCCCTCATTCTCTACACGATTGGCGTCGCCGTCTATCTCTCCAACATTGTG CGCGGGCTGCGCGCCATTAGCGCCAACCTTTGGGAGAGTCCCGAGTTTTTGGAAAACGCAGAGGGCCGCTTCGAG GGCGAGTTTGTCCTGGGCCGCGAGGACAGCCTCAAGGTGCTGGCGGCCAGCAATACCATTTTGGCGCTCGTCCTT ATTGGCGTGCTCATCCTCCAGGCAGGGCAGTGGTATGCCGAGAAGAGGGAGTCGGATGACGAGGCGGCCGCAGAG GCGGCGGAGAAGAAGGACAAGAAGAAGCAGTGA |
| Transcript | >OphauB2|511 ATGGCCTACATTGATTACTCCAAGACGACGAGGTCCAAGAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG ATTATTGGACCGACGTGCTTCTTCCTCGGCATTCTCTTCGCCTCCTTCCCCTACGACTTTCAGTTGCTATGGACT AAGGAGCCCGTCAGTGACACATATTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCGCCGCCGCTA ATAGGACGCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTTTCCAAGCTCTTCCGGCCCAGCGAG GCAAACTTTTTGTTTGACGGCGCATCCCTCATTCTCTACACGATTGGCGTCGCCGTCTATCTCTCCAACATTGTG CGCGGGCTGCGCGCCATTAGCGCCAACCTTTGGGAGAGTCCCGAGTTTTTGGAAAACGCAGAGGGCCGCTTCGAG GGCGAGTTTGTCCTGGGCCGCGAGGACAGCCTCAAGGTGCTGGCGGCCAGCAATACCATTTTGGCGCTCGTCCTT ATTGGCGTGCTCATCCTCCAGGCAGGGCAGTGGTATGCCGAGAAGAGGGAGTCGGATGACGAGGCGGCCGCAGAG GCGGCGGAGAAGAAGGACAAGAAGAAGCAGTGA |
| Gene | >OphauB2|511 ATGGCCTACATTGATTACTCCAAGACGACGAGGTCCAAGAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG ATTATTGGACGTATGTCTGCTGGCCTTGGATGAGAGAGAAAGAGAAAGATGGAGTGCTGACTCAAGAAACATTGG CAGCGACGTGCTTCTTCCTCGGCATTCTCTTCGCCTCCTTCCCCTACGACTTTCAGTTGCTATGGACTAAGGAGC CCGTCAGTGACACATATTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCGCCGCCGCTAATAGGAC GCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTTTCCAAGCTCTTCCGGCCCAGCGAGGCAAACT TTTTGTTTGACGGCGCATCCCTCATTCTCTACACGATTGGCGTCGCCGTCTATCTCTCCAACATTGTGCGCGGGC TGCGCGCCATTAGCGCCAACCTTTGGGAGAGTCCCGAGTTTTTGGAAAACGCAGAGGGCCGCTTCGAGGGCGAGT TTGTCCTGGGCCGCGAGGACAGCCTCAAGGTGCTGGCGGCCAGCAATACCATTTTGGCGCTCGTCCTTATTGGCG TGCTCATCCTCCAGGCAGGGCAGTGGTATGCCGAGAAGAGGGAGTCGGATGACGAGGCGGCCGCAGAGGCGGCGG AGAAGAAGGACAAGAAGAAGCAGTGA |