© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|5060 |
| Gene name | |
| Location | Contig_37:64666..67250 |
| Strand | - |
| Gene length (bp) | 2584 |
| Transcript length (bp) | 2391 |
| Coding sequence length (bp) | 2391 |
| Protein length (aa) | 797 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 1.3E-185 | 97 | 752 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 37 | 794 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 76 | 791 | 0.0E+00 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 1 | 791 | 7.0E-179 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 76 | 766 | 2.0E-169 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 49 | 765 | 1.0E-165 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 37 | 794 | 0.0E+00 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 76 | 791 | 0.0E+00 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 1 | 791 | 7.0E-179 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 76 | 766 | 2.0E-169 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 49 | 765 | 1.0E-165 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 68 | 768 | 4.0E-165 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 75 | 768 | 1.0E-160 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 91 | 766 | 6.0E-157 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 75 | 772 | 4.0E-155 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 54 | 766 | 3.0E-154 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 70 | 768 | 2.0E-152 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 62 | 766 | 7.0E-141 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 7 | 793 | 2.0E-132 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 28 | 767 | 6.0E-123 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 99 | 121 | 22 |
| 2 | 173 | 195 | 22 |
| 3 | 205 | 227 | 22 |
| 4 | 232 | 254 | 22 |
| 5 | 269 | 288 | 19 |
| 6 | 295 | 312 | 17 |
| 7 | 322 | 344 | 22 |
| 8 | 351 | 373 | 22 |
| 9 | 422 | 444 | 22 |
| 10 | 476 | 498 | 22 |
| 11 | 503 | 525 | 22 |
| 12 | 532 | 554 | 22 |
| 13 | 586 | 608 | 22 |
| 14 | 628 | 647 | 19 |
| 15 | 657 | 674 | 17 |
| 16 | 681 | 698 | 17 |
| 17 | 702 | 719 | 17 |
| 18 | 732 | 754 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|5060 MALFRKRHEAEEITPIPGPMASSSSGIDQLQHLQQFEKAHKLDPNLPIDELNDVDTAIATGNAEKGIEIEHALME DNSPYPEVRSVVRNYDVDVPANTVRAWVIGMILCTVGSGINILFSLRNPSVSITTYVVQLIAYPIGRGWDMVMPD RVWNLFGLKFNLRPGKFNYKEHVVIVAMSNAAYGGGVLYATDVLIAQKIFYGQDFGPAFELLFGITTLCTGYGLA GLARRFLVWPAAMIWPADLVNCALFYTLHDHTKSDPTKTNGWSIGRYRLFLVIATGAFVWYWFPGWIFKGLSIFA WVCWIAPNNIVVNKVFGPAYGYGLMPITFDWTVVSGFIGSPLIPPFHAIANVLGGITVFFVFISMGVHFSGAWYS NYLPVQSTESFDNRGKPYNVSRILDANFQFNETAYKEYSPLYLSTQFALAYGLSFAAMSAVIIHVALYHGKEIWR QFKMARHQEDDVHMRLMKKYRDAEDWWYAALLIIMVAVSFGVVTAWPTGFPAWAFVVCMLLPIIWLIPIGLIQAI TNIQLGLNVLTEFIIGYMVPGRPLAMMMFKNYGYISMSQALYFSQDLKLGHYMKVPPRVMFSSQLVASIWSAIVQ IGVLNWAVARIPKVCNIDQPNNYTCPSGRVFYTASVVWGAIGPSRIFSHGATYASLQWFWLIGAATPIVTWLLAR RWPKSIWRYVCTPVIYGGTGLLPPATVYIFLCWGLVGILFNYYIKRRYTGWWLQYNYITSAALDCGLIISSLVIF FTLSLTSTEAPKWWGNTGALSTLDFTNKAIKQHLQPGETFGPSEFP* |
| Coding | >OphauB2|5060 ATGGCCTTGTTTCGCAAGCGCCACGAGGCCGAGGAGATCACGCCCATTCCTGGGCCCATGGCCTCGAGCTCCTCA GGAATCGACCAGCTGCAGCACCTCCAGCAGTTTGAAAAGGCACACAAGCTCGACCCCAACCTGCCTATTGATGAG CTCAACGATGTCGACACTGCCATTGCCACGGGCAATGCTGAAAAGGGCATCGAGATTGAGCATGCTCTCATGGAG GACAACAGCCCGTATCCCGAGGTGCGCTCTGTTGTTCGCAACTACGATGTCGATGTGCCGGCGAATACGGTCCGC GCCTGGGTCATTGGCATGATTCTCTGCACCGTCGGCTCTGGCATCAACATTCTCTTCTCGCTGCGCAACCCTAGT GTTTCCATCACCACGTACGTTGTGCAGCTCATTGCCTATCCCATTGGCCGCGGCTGGGACATGGTGATGCCCGAC CGCGTCTGGAATCTCTTTGGCCTCAAGTTTAACTTGCGCCCTGGCAAGTTCAACTACAAGGAACATGTTGTCATT GTCGCCATGTCCAACGCTGCTTATGGAGGTGGTGTTCTCTACGCCACCGACGTGCTCATTGCGCAAAAGATATTC TACGGCCAAGACTTTGGCCCTGCCTTTGAGCTTCTCTTTGGCATCACCACCCTGTGCACCGGCTATGGCCTGGCA GGCCTTGCACGTCGTTTTCTCGTCTGGCCTGCCGCCATGATCTGGCCCGCCGATCTGGTCAACTGCGCCCTGTTT TATACCCTTCATGATCACACAAAGTCGGACCCGACAAAGACCAACGGCTGGTCCATTGGCCGCTACCGTCTTTTC CTCGTCATTGCCACGGGAGCCTTTGTTTGGTACTGGTTTCCCGGCTGGATCTTCAAGGGCCTGTCCATCTTCGCC TGGGTCTGCTGGATCGCTCCCAACAACATTGTCGTCAACAAGGTCTTTGGCCCTGCCTATGGATACGGCCTGATG CCCATCACCTTTGACTGGACCGTTGTCAGCGGCTTCATTGGCTCTCCCCTCATACCCCCCTTCCACGCCATCGCC AATGTTCTCGGCGGCATCACTGTCTTCTTCGTCTTCATCTCAATGGGCGTTCACTTTAGCGGTGCATGGTACTCC AACTACCTGCCTGTTCAGTCCACCGAGTCGTTTGATAACCGGGGCAAGCCGTATAATGTGAGCCGCATCCTCGAC GCCAATTTCCAGTTCAACGAGACGGCCTACAAGGAATACTCTCCCCTCTACCTGTCCACTCAATTTGCTCTGGCC TACGGGCTATCCTTTGCCGCCATGTCGGCCGTCATCATTCATGTTGCCCTGTACCACGGCAAAGAGATTTGGCGC CAGTTCAAAATGGCACGCCATCAGGAAGACGATGTGCACATGCGTCTGATGAAGAAGTATCGTGATGCCGAAGAC TGGTGGTATGCCGCCTTGCTCATTATCATGGTGGCCGTTTCCTTTGGCGTCGTCACAGCCTGGCCCACTGGCTTC CCGGCCTGGGCCTTTGTCGTCTGTATGCTGTTGCCCATTATTTGGCTAATTCCAATTGGCCTTATTCAGGCCATT ACCAATATCCAACTCGGCCTCAATGTCCTCACCGAATTCATCATTGGCTACATGGTGCCCGGGCGACCCCTGGCC ATGATGATGTTCAAGAATTACGGCTACATTTCCATGTCTCAGGCCCTCTACTTTTCCCAGGATCTCAAGCTTGGC CATTACATGAAGGTGCCGCCACGAGTCATGTTTTCGTCGCAACTAGTCGCCTCGATTTGGTCCGCCATTGTGCAA ATCGGCGTCCTCAACTGGGCCGTTGCTCGAATCCCCAAGGTGTGCAACATTGATCAACCAAACAATTACACTTGC CCCAGTGGCCGCGTATTCTACACGGCCTCGGTTGTCTGGGGAGCCATAGGGCCCTCACGCATTTTTAGCCACGGC GCCACCTATGCCTCGCTGCAATGGTTTTGGCTCATTGGAGCTGCAACGCCCATTGTCACTTGGCTGCTCGCCCGC CGCTGGCCCAAGTCAATCTGGCGCTACGTTTGCACGCCCGTCATTTACGGTGGTACCGGTCTGCTCCCGCCAGCA ACTGTTTACATTTTTCTTTGCTGGGGTCTCGTCGGTATCCTGTTCAATTATTACATCAAGCGCCGCTATACGGGC TGGTGGCTGCAGTACAATTACATCACCTCTGCTGCCCTTGACTGCGGCCTCATCATCTCGTCACTCGTCATCTTC TTCACCCTTTCCCTCACGAGTACCGAGGCACCCAAGTGGTGGGGCAACACTGGTGCTCTCAGCACCCTTGATTTT ACAAACAAGGCAATCAAGCAGCATCTGCAGCCTGGGGAGACTTTTGGCCCGTCAGAGTTTCCGTGA |
| Transcript | >OphauB2|5060 ATGGCCTTGTTTCGCAAGCGCCACGAGGCCGAGGAGATCACGCCCATTCCTGGGCCCATGGCCTCGAGCTCCTCA GGAATCGACCAGCTGCAGCACCTCCAGCAGTTTGAAAAGGCACACAAGCTCGACCCCAACCTGCCTATTGATGAG CTCAACGATGTCGACACTGCCATTGCCACGGGCAATGCTGAAAAGGGCATCGAGATTGAGCATGCTCTCATGGAG GACAACAGCCCGTATCCCGAGGTGCGCTCTGTTGTTCGCAACTACGATGTCGATGTGCCGGCGAATACGGTCCGC GCCTGGGTCATTGGCATGATTCTCTGCACCGTCGGCTCTGGCATCAACATTCTCTTCTCGCTGCGCAACCCTAGT GTTTCCATCACCACGTACGTTGTGCAGCTCATTGCCTATCCCATTGGCCGCGGCTGGGACATGGTGATGCCCGAC CGCGTCTGGAATCTCTTTGGCCTCAAGTTTAACTTGCGCCCTGGCAAGTTCAACTACAAGGAACATGTTGTCATT GTCGCCATGTCCAACGCTGCTTATGGAGGTGGTGTTCTCTACGCCACCGACGTGCTCATTGCGCAAAAGATATTC TACGGCCAAGACTTTGGCCCTGCCTTTGAGCTTCTCTTTGGCATCACCACCCTGTGCACCGGCTATGGCCTGGCA GGCCTTGCACGTCGTTTTCTCGTCTGGCCTGCCGCCATGATCTGGCCCGCCGATCTGGTCAACTGCGCCCTGTTT TATACCCTTCATGATCACACAAAGTCGGACCCGACAAAGACCAACGGCTGGTCCATTGGCCGCTACCGTCTTTTC CTCGTCATTGCCACGGGAGCCTTTGTTTGGTACTGGTTTCCCGGCTGGATCTTCAAGGGCCTGTCCATCTTCGCC TGGGTCTGCTGGATCGCTCCCAACAACATTGTCGTCAACAAGGTCTTTGGCCCTGCCTATGGATACGGCCTGATG CCCATCACCTTTGACTGGACCGTTGTCAGCGGCTTCATTGGCTCTCCCCTCATACCCCCCTTCCACGCCATCGCC AATGTTCTCGGCGGCATCACTGTCTTCTTCGTCTTCATCTCAATGGGCGTTCACTTTAGCGGTGCATGGTACTCC AACTACCTGCCTGTTCAGTCCACCGAGTCGTTTGATAACCGGGGCAAGCCGTATAATGTGAGCCGCATCCTCGAC GCCAATTTCCAGTTCAACGAGACGGCCTACAAGGAATACTCTCCCCTCTACCTGTCCACTCAATTTGCTCTGGCC TACGGGCTATCCTTTGCCGCCATGTCGGCCGTCATCATTCATGTTGCCCTGTACCACGGCAAAGAGATTTGGCGC CAGTTCAAAATGGCACGCCATCAGGAAGACGATGTGCACATGCGTCTGATGAAGAAGTATCGTGATGCCGAAGAC TGGTGGTATGCCGCCTTGCTCATTATCATGGTGGCCGTTTCCTTTGGCGTCGTCACAGCCTGGCCCACTGGCTTC CCGGCCTGGGCCTTTGTCGTCTGTATGCTGTTGCCCATTATTTGGCTAATTCCAATTGGCCTTATTCAGGCCATT ACCAATATCCAACTCGGCCTCAATGTCCTCACCGAATTCATCATTGGCTACATGGTGCCCGGGCGACCCCTGGCC ATGATGATGTTCAAGAATTACGGCTACATTTCCATGTCTCAGGCCCTCTACTTTTCCCAGGATCTCAAGCTTGGC CATTACATGAAGGTGCCGCCACGAGTCATGTTTTCGTCGCAACTAGTCGCCTCGATTTGGTCCGCCATTGTGCAA ATCGGCGTCCTCAACTGGGCCGTTGCTCGAATCCCCAAGGTGTGCAACATTGATCAACCAAACAATTACACTTGC CCCAGTGGCCGCGTATTCTACACGGCCTCGGTTGTCTGGGGAGCCATAGGGCCCTCACGCATTTTTAGCCACGGC GCCACCTATGCCTCGCTGCAATGGTTTTGGCTCATTGGAGCTGCAACGCCCATTGTCACTTGGCTGCTCGCCCGC CGCTGGCCCAAGTCAATCTGGCGCTACGTTTGCACGCCCGTCATTTACGGTGGTACCGGTCTGCTCCCGCCAGCA ACTGTTTACATTTTTCTTTGCTGGGGTCTCGTCGGTATCCTGTTCAATTATTACATCAAGCGCCGCTATACGGGC TGGTGGCTGCAGTACAATTACATCACCTCTGCTGCCCTTGACTGCGGCCTCATCATCTCGTCACTCGTCATCTTC TTCACCCTTTCCCTCACGAGTACCGAGGCACCCAAGTGGTGGGGCAACACTGGTGCTCTCAGCACCCTTGATTTT ACAAACAAGGCAATCAAGCAGCATCTGCAGCCTGGGGAGACTTTTGGCCCGTCAGAGTTTCCGTGA |
| Gene | >OphauB2|5060 ATGGCCTTGTTTCGCAAGCGCCACGAGGCCGAGGAGATCACGCCCATTCCTGGGCCCATGGCCTCGAGCTCCTCA GGAATCGACCAGCTGCAGCACCTCCAGCAGTTTGAAAAGGCACACAAGCTCGACCCCAACCTGCCTATTGATGAG CTCAACGATGTCGACACTGCCATTGCCACGGGCAATGCTGAAAAGGGCATCGAGATTGAGCATGCTCTCATGGAG GACAACAGCCCGTATCCCGAGGTGAGATGGCTCCCCCCCCCCGCTCCATGCCTGCCACTTGTCTAACCTGCCCAG GTGCGCTCTGTTGTTCGCAACTACGATGTCGATGTGCCGGCGAATACGGTCCGCGCCTGGGTCATTGGCATGATT CTCTGCACCGTCGGCTCTGGCATCAACATTCTCTTCTCGCTGCGCAACCCTAGTGTTTCCATCACCACGTACGTT GTGCAGCTCATTGCCTATCCCATTGGCCGCGGCTGGGACATGGTGATGCCCGACCGCGTCTGGAATCTCTTTGGC CTCAAGTTTAACTTGCGCCCTGGCAAGTTCAACTACAAGGAACATGTTGTCATTGTCGCCATGTCCAACGTGAGC CACGCTGCCCCTGAGCACCCATTCTCTCCCTTGACGCTGCTGACTTGAACATGTTGATAAAAAAGGCTGCTTATG GAGGTGGTGTTCTCTACGCCACCGACGTGCTCATTGCGCAAAAGATATTCTACGGCCAAGACTTTGGCCCTGCCT TTGAGCTTCTCTTTGGCATCACCACCCTGTGCACCGGCTATGGCCTGGCAGGCCTTGCACGTCGTTTTCTCGTCT GGCCTGCCGCCATGATCTGGCCCGCCGATCTGGTCAACTGCGCCCTGTTTTATACCCTTCATGATCACACAAAGT CGGACCCGACAAAGACCAACGGCTGGTCCATTGGCCGCTACCGTCTTTTCCTCGTCATTGCCACGGGAGCCTTTG TTTGGTACTGGTTTCCCGGCTGGATCTTCAAGGGCCTGTCCATCTTCGCCTGGGTCTGCTGGATCGCTCCCAACA ACATTGTCGTCAACAAGGTCTTTGGCCCTGCCTATGGATACGGCCTGATGCCCATCACCTTTGACTGGACCGTTG TCAGCGGCTTCATTGGCTCTCCCCTCATACCCCCCTTCCACGCCATCGCCAATGTTCTCGGCGGCATCACTGTCT TCTTCGTCTTCATCTCAATGGGCGTTCACTTTAGCGGTGCATGGTACTCCAACTACCTGCCTGTTCAGTCCACCG AGTCGTTTGATAACCGGGGCAAGCCGTATAATGTGAGCCGCATCCTCGACGCCAATTTCCAGTTCAACGAGACGG CCTACAAGGAATACTCTCCCCTCTACCTGTCCACTCAATTTGCTCTGGCCTACGGGCTATCCTTTGCCGCCATGT CGGCCGTCATCATTCATGTTGCCCTGTACCACGGCAAAGAGATTTGGCGCCAGTTCAAAATGGCACGCCATCAGG AAGACGATGTGCACATGCGTCTGATGAAGAAGTATCGTGATGCCGAAGACTGGTGGTATGCCGGTATGTCATGAC TTGTGTCTAGGCGTTGCGTCCCTGGCCAGGAAGCCTCAACTAACTCGAGTTTTTAGCCTTGCTCATTATCATGGT GGCCGTTTCCTTTGGCGTCGTCACAGCCTGGCCCACTGGCTTCCCGGCCTGGGCCTTTGTCGTCTGTATGCTGTT GCCCATTATTTGGCTAATTCCAATTGGCCTTATTCAGGCCATTACCAATATCCAACTCGGCCTCAATGTCCTCAC CGAATTCATCATTGGCTACATGGTGCCCGGGCGACCCCTGGCCATGATGATGTTCAAGAATTACGGCTACATTTC CATGTCTCAGGCCCTCTACTTTTCCCAGGATCTCAAGCTTGGCCATTACATGAAGGTGCCGCCACGAGTCATGTT TTCGTCGCAACTAGTCGCCTCGATTTGGTCCGCCATTGTGCAAATCGGCGTCCTCAACTGGGCCGTTGCTCGAAT CCCCAAGGTGTGCAACATTGATCAACCAAACAATTACACTTGCCCCAGTGGCCGCGTATTCTACACGGCCTCGGT TGTCTGGGGAGCCATAGGGCCCTCACGCATTTTTAGCCACGGCGCCACCTATGCCTCGCTGCAATGGTTTTGGCT CATTGGAGCTGCAACGCCCATTGTCACTTGGCTGCTCGCCCGCCGCTGGCCCAAGTCAATCTGGCGCTACGTTTG CACGCCCGTCATTTACGGTGGTACCGGTCTGCTCCCGCCAGCAACTGTTTACATTTTTCTTTGCTGGGGTCTCGT CGGTATCCTGTTCAATTATTACATCAAGCGCCGCTATACGGGCTGGTGGCTGCAGTACAATTACATCACCTCTGC TGCCCTTGACTGCGGCCTCATCATCTCGTCACTCGTCATCTTCTTCACCCTTTCCCTCACGAGTACCGAGGCACC CAAGTGGTGGGGCAACACTGGTGCTCTCAGCACCCTTGATTTTACAAACAAGGCAATCAAGCAGCATCTGCAGCC TGGGGAGACTTTTGGCCCGTCAGAGTTTCCGTGA |