Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|5031
Gene name
LocationContig_369:1513..3376
Strand-
Gene length (bp)1863
Transcript length (bp)1740
Coding sequence length (bp)1740
Protein length (aa) 580

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03547 Mem_trans Membrane transport protein 4.8E-52 45 563

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 37 236 2.0E-50
sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 45 256 1.0E-48
sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 393 576 7.0E-37
sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 384 575 4.0E-33

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0051179 localization No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0051234 establishment of localization No
GO:0005575 cellular_component No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.5

Transmembrane Domains

Domain # Start End Length
1 41 63 22
2 76 95 19
3 105 127 22
4 387 409 22
5 441 458 17
6 479 501 22
7 514 533 19
8 554 576 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|5031
MDSTGATTSFRLATIARDAYDYPMRVFQNPAAEAHPSLPHLCLLVFEAVLEVVCVSLPGYIIARLGHFDADKQKF
LANLNVMLFTPCLIFTKLASQLNAKKLSELAIIPAIFVVQTLVSWVVSILVAKVFRFNRRASNFVTAMGVFGNSN
SLPISLVLSLSQTIKGLHWDRIPGDNDDEVGARGILYLLIFQQLGQLVRWSWGYHVLLASKDKYPEYQQQIAEQG
QVRRHLTETHNAGEAQGLIEGLDGDTEDEDTPRSVDSRTFVPDGPTPVVGNSRTSMTDSSSEDEDSPKKSRSKRT
QSGIKHRNTVVSAGSTNEFTFPRVGSANDGIGHGGGIWARSKANMKSRMQSLQRKTSTYLGRLYQGLPRSIQATL
SFLSAIVRKTSHFIWEFMNPPLWAMLIAVMVASIPSLQKLFFGYIMPWXEEGSFVNNSVTNAVKSSGGVAVPLIL
VVLGANLARNTMARDDNHDPEEEEVGTRLLVASLLSRMILPTIIMAPILALMAKYVPISILDDPIFIIVCFLLTG
APSALQLAQICQINNVYEKTMGRILFQSYVIWILPSTLVLVMMALEVVRWAAGS*
Coding >OphauB2|5031
ATGGATTCTACAGGGGCGACGACATCTTTTCGCCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG
GTTTTCCAAAACCCTGCTGCTGAGGCACATCCGTCGCTGCCTCATTTATGTCTGCTCGTCTTCGAGGCTGTACTC
GAAGTTGTGTGCGTCAGTCTCCCCGGATACATCATCGCTCGCCTCGGCCACTTTGATGCCGATAAGCAAAAGTTT
TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGATCTTTACCAAGCTGGCCTCTCAACTCAATGCCAAG
AAACTGTCCGAACTTGCCATCATACCCGCCATCTTCGTCGTACAGACGCTCGTGTCTTGGGTTGTTTCGATATTA
GTAGCCAAGGTATTTCGCTTCAATCGACGAGCCTCGAATTTTGTCACCGCAATGGGCGTCTTTGGAAACTCCAAC
TCTCTACCAATCTCTCTTGTTCTCTCCCTATCGCAAACCATCAAGGGCCTCCATTGGGACAGAATACCCGGCGAC
AACGATGATGAGGTTGGGGCTCGAGGCATTCTCTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTCCGGTGG
AGCTGGGGATACCATGTCCTCTTGGCGTCCAAAGACAAGTATCCCGAGTATCAGCAACAAATCGCCGAACAAGGC
CAGGTCCGGCGACATTTGACTGAGACACATAACGCGGGGGAGGCTCAAGGTCTCATTGAAGGTCTCGATGGGGAT
ACCGAAGACGAGGACACTCCCCGCAGCGTCGATTCGCGTACCTTTGTACCTGATGGCCCCACGCCTGTCGTTGGC
AATTCGAGAACCTCCATGACGGATTCGAGCAGTGAAGACGAGGACTCTCCCAAAAAGTCACGGTCCAAGAGAACT
CAGTCCGGCATCAAGCACCGAAATACCGTCGTCAGTGCCGGCAGCACCAATGAGTTCACCTTTCCTCGTGTGGGC
AGCGCCAACGACGGTATAGGTCATGGCGGAGGTATCTGGGCTCGATCCAAGGCAAACATGAAAAGCAGGATGCAG
TCGTTACAAAGAAAGACTTCCACGTACCTGGGCCGACTCTACCAAGGCTTGCCTCGTTCTATACAAGCTACATTA
TCGTTTTTGTCGGCAATTGTCAGAAAGACGAGTCATTTCATTTGGGAGTTCATGAATCCTCCCCTGTGGGCCATG
CTCATTGCCGTCATGGTGGCATCAATTCCATCGTTGCAGAAGTTATTTTTCGGCTACATAATGCCTTGGCNNGAA
GAGGGGTCCTTTGTCAACAATAGCGTGACCAACGCTGTCAAGTCAAGCGGCGGAGTCGCGGTTCCTCTGATTCTT
GTCGTTTTGGGTGCTAACCTAGCGCGCAATACAATGGCTCGTGACGATAACCATGACCCCGAAGAAGAGGAGGTG
GGAACCAGGCTCTTGGTGGCATCGCTGCTAAGTCGAATGATTCTTCCAACCATTATTATGGCACCAATCCTGGCC
TTGATGGCCAAGTATGTGCCCATCAGCATCCTCGACGACCCCATCTTCATCATTGTCTGTTTCCTTCTCACAGGC
GCCCCGAGCGCCCTCCAACTGGCACAAATATGCCAGATTAACAATGTGTACGAGAAGACGATGGGCAGAATACTC
TTCCAAAGCTATGTCATATGGATACTGCCCTCCACCTTGGTCCTTGTCATGATGGCCTTGGAAGTGGTTCGTTGG
GCTGCTGGCTCGTAA
Transcript >OphauB2|5031
ATGGATTCTACAGGGGCGACGACATCTTTTCGCCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG
GTTTTCCAAAACCCTGCTGCTGAGGCACATCCGTCGCTGCCTCATTTATGTCTGCTCGTCTTCGAGGCTGTACTC
GAAGTTGTGTGCGTCAGTCTCCCCGGATACATCATCGCTCGCCTCGGCCACTTTGATGCCGATAAGCAAAAGTTT
TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGATCTTTACCAAGCTGGCCTCTCAACTCAATGCCAAG
AAACTGTCCGAACTTGCCATCATACCCGCCATCTTCGTCGTACAGACGCTCGTGTCTTGGGTTGTTTCGATATTA
GTAGCCAAGGTATTTCGCTTCAATCGACGAGCCTCGAATTTTGTCACCGCAATGGGCGTCTTTGGAAACTCCAAC
TCTCTACCAATCTCTCTTGTTCTCTCCCTATCGCAAACCATCAAGGGCCTCCATTGGGACAGAATACCCGGCGAC
AACGATGATGAGGTTGGGGCTCGAGGCATTCTCTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTCCGGTGG
AGCTGGGGATACCATGTCCTCTTGGCGTCCAAAGACAAGTATCCCGAGTATCAGCAACAAATCGCCGAACAAGGC
CAGGTCCGGCGACATTTGACTGAGACACATAACGCGGGGGAGGCTCAAGGTCTCATTGAAGGTCTCGATGGGGAT
ACCGAAGACGAGGACACTCCCCGCAGCGTCGATTCGCGTACCTTTGTACCTGATGGCCCCACGCCTGTCGTTGGC
AATTCGAGAACCTCCATGACGGATTCGAGCAGTGAAGACGAGGACTCTCCCAAAAAGTCACGGTCCAAGAGAACT
CAGTCCGGCATCAAGCACCGAAATACCGTCGTCAGTGCCGGCAGCACCAATGAGTTCACCTTTCCTCGTGTGGGC
AGCGCCAACGACGGTATAGGTCATGGCGGAGGTATCTGGGCTCGATCCAAGGCAAACATGAAAAGCAGGATGCAG
TCGTTACAAAGAAAGACTTCCACGTACCTGGGCCGACTCTACCAAGGCTTGCCTCGTTCTATACAAGCTACATTA
TCGTTTTTGTCGGCAATTGTCAGAAAGACGAGTCATTTCATTTGGGAGTTCATGAATCCTCCCCTGTGGGCCATG
CTCATTGCCGTCATGGTGGCATCAATTCCATCGTTGCAGAAGTTATTTTTCGGCTACATAATGCCTTGGCNNGAA
GAGGGGTCCTTTGTCAACAATAGCGTGACCAACGCTGTCAAGTCAAGCGGCGGAGTCGCGGTTCCTCTGATTCTT
GTCGTTTTGGGTGCTAACCTAGCGCGCAATACAATGGCTCGTGACGATAACCATGACCCCGAAGAAGAGGAGGTG
GGAACCAGGCTCTTGGTGGCATCGCTGCTAAGTCGAATGATTCTTCCAACCATTATTATGGCACCAATCCTGGCC
TTGATGGCCAAGTATGTGCCCATCAGCATCCTCGACGACCCCATCTTCATCATTGTCTGTTTCCTTCTCACAGGC
GCCCCGAGCGCCCTCCAACTGGCACAAATATGCCAGATTAACAATGTGTACGAGAAGACGATGGGCAGAATACTC
TTCCAAAGCTATGTCATATGGATACTGCCCTCCACCTTGGTCCTTGTCATGATGGCCTTGGAAGTGGTTCGTTGG
GCTGCTGGCTCGTAA
Gene >OphauB2|5031
ATGGATTCTACAGGGGCGACGACATCTTTTCGCCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG
GTTTTCCAAAACCCTGCTGCTGAGGCACATCCGTCGCTGCCTCATTTATGTCTGCTCGTCTTCGAGGCTGTACTC
GAAGTTGTGTGCGTCAGTCTCCCCGGATACATCATCGCTCGCCTCGGCCACTTTGATGCCGATAAGCAAAAGTTT
TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGAGTACGTCTCTCTCTTCGCTACTTGAATATACACTG
AGCTCGAGTTAATCGTGCCACTGCAGTCTTTACCAAGCTGGCCTCTCAACTCAATGCCAAGAAACTGTCCGAACT
TGCCATCATACCCGCCATCTTCGTCGTACAGACGCTCGTGTCTTGGGTTGTTTCGATATTAGTAGCCAAGGTATT
TCGCTTCAATCGACGAGCCTCGAATTTTGTCACCGCAATGGGCGTCTTTGGAAACTCCAACTCTCTACCAATCTC
TCTTGTTCTCTCCCTATCGCAAACCATCAAGGGCCTCCATTGGGACAGAATACCCGGCGACAACGATGATGAGGT
TGGGGCTCGAGGCATTCTCTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTCCGGTGGAGCTGGGGATACCA
TGTCCTCTTGGCGTCCAAAGACAAGTATCCCGAGTATCAGCAACAAATCGCCGAACAAGGCCAGGTCCGGCGACA
TTTGACTGAGACACATAACGCGGGGGAGGCTCAAGGTCTCATTGAAGGTCTCGATGGGGATACCGAAGACGAGGA
CACTCCCCGCAGCGTCGATTCGCGTACCTTTGTACCTGATGGCCCCACGCCTGTCGTTGGCAATTCGAGAACCTC
CATGACGGATTCGAGCAGTGAAGACGAGGACTCTCCCAAAAAGTCACGGTCCAAGAGAACTCAGTCCGGCATCAA
GCACCGAAATACCGTCGTCAGTGCCGGCAGCACCAATGAGTTCACCTTTCCTCGTGTGGGCAGCGCCAACGACGG
TATAGGTCATGGCGGAGGTATCTGGGCTCGATCCAAGGCAAACATGAAAAGCAGGATGCAGTCGTTACAAAGAAA
GACTTCCACGTACCTGGGCCGACTCTACCAAGGCTTGCCTCGTTCTATACAAGCTACATTATCGTTTTTGTCGGC
AATTGTCAGAAAGACGAGTCATTTCATTTGGGAGTTCATGAATCCTCCCCTGTGGGCCATGCTCATTGCCGTCAT
GGTGGCATCAATTCCATCGTTGCAGAAGTTATTTTTCGGCTACATAATGCCTTGGCNNGAAGAGGGGTCCTTTGT
CAACAATAGCGTGACCAACGCTGTCAAGTCAAGCGGCGGAGTCGCGGTTCCTCTGATTCTTGTCGTTTTGGGTGC
TAACCTAGCGCGCAATACAATGGCTCGTGACGATAACCATGACCCCGAAGAAGAGGAGGTGGGAACCAGGCTCTT
GGTGGCATCGCTGCTAAGTCGAATGATTCTTCCAACCATTATTATGGCACCAATCCTGGCCTTGATGGCCAAGTA
TGTGCCCATCAGCATCCTCGACGACCCCATCTTCATCATTGTCTGTTTCCTTCTCACAGGCGCCCCGAGCGCCCT
CCAACTGGCACAAATATGCCAGATTAACAATGTGTACGAGAAGACGATGGGCAGAATACTCTTCCAAAGCTATGT
CATATGGTAAGCGCCTCTTGAACGAATTCTTGAACGGTAGCGTAGATGGAGAGCTAACTATATTCAAGGATACTG
CCCTCCACCTTGGTCCTTGTCATGATGGCCTTGGAAGTGGTTCGTTGGGCTGCTGGCTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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