Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|5004
Gene name
Location	Contig_36:97597..98753
Strand	-
Gene length (bp)	1156
Transcript length (bp)	1098
Coding sequence length (bp)	1098
Protein length (aa)	366

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07766	LETM1_RBD	LETM1-like, RBD	1.3E-08	274	347

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	172	194	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|5004 MILRSQTWRQCHGLGNGLGSRFITLRCQATRCNGPRIGAAQLRRLHMSHPLYMEDSGEKSSSVDSSIPSAAANPL VNPPASTRPPRLQSPDSNAFESRPKYYFQLAKAYLGFYKDGFKSVWTNRNLLRSKIARTPADDRPSLMRLDYVPR SFSRADWVLLWRVRHDMLRLPLFGLVLLLFGELTPLVIIVVDGIVPYPCRIPRQIQKGIQRAEVRRHEAFNEMES RFPHGPLSSELTPQVARCHILRSLDLTSRIWDRVGFTPPGMWQVKGNIRMAFLMGDDINLVQDGGVTGLVPYELR IACSERGIDVLGKSCTELRLWLGDWLRLTASSSSQDKRRRMVTLMLTRPENWPQNRNFAVPAWEI*
Coding	>OphauB2\|5004 ATGATTCTACGGAGCCAGACGTGGCGACAATGTCACGGCCTTGGAAATGGCCTTGGCAGTCGATTCATCACGTTG CGATGCCAGGCCACTCGCTGTAATGGGCCACGCATTGGCGCAGCCCAGTTGCGCCGATTGCACATGTCGCATCCC CTCTACATGGAGGACTCTGGCGAGAAGTCTTCAAGCGTCGATTCGTCGATTCCGTCGGCGGCTGCGAATCCGCTC GTCAATCCGCCAGCCTCGACGCGGCCACCGCGGTTGCAATCGCCCGATTCAAACGCCTTTGAATCGCGACCAAAA TATTATTTCCAGCTTGCCAAGGCATACCTTGGCTTCTACAAAGACGGCTTCAAGAGCGTCTGGACGAACCGCAAC CTTTTGCGCTCAAAAATTGCCAGGACGCCGGCCGACGACCGACCCTCGCTGATGCGTCTCGACTACGTGCCGCGC TCCTTTTCTCGCGCTGACTGGGTGCTGCTGTGGCGAGTGCGCCACGACATGCTGCGTCTGCCGCTGTTTGGCCTC GTGCTGCTCTTGTTTGGCGAGCTCACGCCTCTCGTCATCATCGTGGTGGACGGCATCGTGCCCTATCCCTGCCGC ATCCCGCGTCAGATCCAAAAGGGGATTCAGCGCGCCGAAGTACGCCGCCATGAAGCCTTTAATGAGATGGAGTCA CGCTTCCCTCACGGCCCCTTGAGCTCGGAGCTTACGCCGCAGGTTGCAAGGTGTCATATTCTGCGCAGCCTGGAC CTCACTAGCCGTATCTGGGACAGGGTCGGCTTCACGCCTCCTGGCATGTGGCAGGTCAAGGGAAATATCCGCATG GCCTTTCTCATGGGCGACGACATCAATCTTGTCCAAGACGGCGGAGTGACGGGTCTGGTGCCTTACGAGCTGCGA ATCGCCTGCTCGGAGCGAGGCATCGACGTGTTGGGCAAGAGTTGCACCGAGCTGCGGCTCTGGCTCGGCGACTGG CTCAGACTCACGGCCTCGAGTAGCAGCCAAGATAAGAGGCGGCGCATGGTGACGCTCATGCTGACCAGACCCGAA AACTGGCCCCAAAATCGAAATTTTGCAGTGCCCGCCTGGGAAATATAA
Transcript	>OphauB2\|5004 ATGATTCTACGGAGCCAGACGTGGCGACAATGTCACGGCCTTGGAAATGGCCTTGGCAGTCGATTCATCACGTTG CGATGCCAGGCCACTCGCTGTAATGGGCCACGCATTGGCGCAGCCCAGTTGCGCCGATTGCACATGTCGCATCCC CTCTACATGGAGGACTCTGGCGAGAAGTCTTCAAGCGTCGATTCGTCGATTCCGTCGGCGGCTGCGAATCCGCTC GTCAATCCGCCAGCCTCGACGCGGCCACCGCGGTTGCAATCGCCCGATTCAAACGCCTTTGAATCGCGACCAAAA TATTATTTCCAGCTTGCCAAGGCATACCTTGGCTTCTACAAAGACGGCTTCAAGAGCGTCTGGACGAACCGCAAC CTTTTGCGCTCAAAAATTGCCAGGACGCCGGCCGACGACCGACCCTCGCTGATGCGTCTCGACTACGTGCCGCGC TCCTTTTCTCGCGCTGACTGGGTGCTGCTGTGGCGAGTGCGCCACGACATGCTGCGTCTGCCGCTGTTTGGCCTC GTGCTGCTCTTGTTTGGCGAGCTCACGCCTCTCGTCATCATCGTGGTGGACGGCATCGTGCCCTATCCCTGCCGC ATCCCGCGTCAGATCCAAAAGGGGATTCAGCGCGCCGAAGTACGCCGCCATGAAGCCTTTAATGAGATGGAGTCA CGCTTCCCTCACGGCCCCTTGAGCTCGGAGCTTACGCCGCAGGTTGCAAGGTGTCATATTCTGCGCAGCCTGGAC CTCACTAGCCGTATCTGGGACAGGGTCGGCTTCACGCCTCCTGGCATGTGGCAGGTCAAGGGAAATATCCGCATG GCCTTTCTCATGGGCGACGACATCAATCTTGTCCAAGACGGCGGAGTGACGGGTCTGGTGCCTTACGAGCTGCGA ATCGCCTGCTCGGAGCGAGGCATCGACGTGTTGGGCAAGAGTTGCACCGAGCTGCGGCTCTGGCTCGGCGACTGG CTCAGACTCACGGCCTCGAGTAGCAGCCAAGATAAGAGGCGGCGCATGGTGACGCTCATGCTGACCAGACCCGAA AACTGGCCCCAAAATCGAAATTTTGCAGTGCCCGCCTGGGAAATATAA
Gene	>OphauB2\|5004 ATGATTCTACGGAGCCAGACGTGGCGACAATGTCACGGCCTTGGAAATGGCCTTGGCAGTCGATTCATCACGTTG CGATGCCAGGCCACTCGCTGTAATGGGCCACGCATTGGCGCAGCCCAGTTGCGCCGATTGCACATGTCGCATCCC CTCTACATGGAGGACTCTGGCGAGAAGTCTTCAAGCGTCGATTCGTCGATTCCGTCGGCGGCTGCGAATCCGCTC GTCAATCCGCCAGCCTCGACGCGGCCACCGCGGTTGCAATCGCCCGATTCAAACGCCTTTGAATCGCGACCAAAA TATTATTTCCAGCTTGCCAAGGCATACCTTGGCTTCTACAAAGACGGCTTCAAGAGCGTCTGGACGAACCGCAAC CTTTTGCGCTCAAAAATTGCCAGGACGCCGGCCGACGACCGACCCTCGCTGATGCGTCTCGACTACGTGCCGCGC TCCTTTTCTCGCGCTGACTGGGTGCTGCTGTGGCGAGTGCGCCACGACATGCTGCGTCTGCCGCTGTTTGGCCTC GTGCTGCTCTTGTTTGGCGAGCTCACGCCTCTCGTCATCATCGTGGTGGACGGCATCGTGCCCTATCCCTGCCGC ATCCCGCGTCAGATCCAAAAGGGGATTCAGCGCGCCGAAGTACGCCGCCATGAAGCCTTTAATGAGATGGAGTCA CGCTTCCCTCACGGCCCCTTGAGCTCGGAGCTTACGCCGCAGGTTGCAAGGTGTCATATTCTGCGCAGCCTGGAC CTCACTAGCCGTATCTGGGACAGGGTCGGCTTCACGCCTCCTGGCATGTGGCAGGTCAAGGGAAATATCCGCATG GCCTTTCTCATGGGCGACGACATCAATCTTGTCCAAGACGGCGGAGTGACGGGTCTGGTGCCTTACGAGCTGCGA ATCGCCTGCTCGGAGCGAGGCATCGACGTGTTGGGCAAGAGTTGCACCGAGCTGCGGCTCTGGCTCGGCGACTGG CTCAGACTCACGGCCTCGAGTAGCAGCCAAGATAAGAGGCGGCGCATGGTGACGCTCATGCTGACCAGGTAACAA GGCCTCCCAGCTCGCTGACTTGCTAGTGATAGACACTGACGCTGCATGCAGACCCGAAAACTGGCCCCAAAATCG AAATTTTGCAGTGCCCGCCTGGGAAATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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